SSX2IP ORF clone FXC00684

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Flexi ORF Clone FXC00684

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Clone info.

Species

human

Clone Name

pF1KSDA0923 Sequence (with vector) Restriction Map

Product ID

FXC00684

HaloTag Clone PID

FHC00684

ORF Sequence

DNA sequence (1842 bp)
Protein sequence (614 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384045]

Gene

KIAA0923

Symbol

SSX2IP

Alias : ADIP, hMsd1

Description

synovial sarcoma, X breakpoint 2 interacting protein, transcript variant 5

Original Clone ID

hh02882

Features of the cloned ORF sequence

Description

Length: 1842 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 614 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS699.1 2.5e-143 100.0 SSX2IP CCDS53337.1 7e-137 100.0 SSX2IP The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021622 63 214 PF11559 Afadin/alpha-actinin-binding
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_054740 614 608690 100.0 100.0 NP_001159765 614 608690 100.0 100.0 XP_011538912 614 608690 100.0 100.0 NP_001159889 614 608690 100.0 100.0 XP_005270485 614 608690 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0923 Download

>KIAA0923  1842 bp
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCT
CAATATACCTCAGAAACAAAGATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGT
TCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCAGTGCCTTCTGCACAGAAGAT
AATATTGAACAGAGTATCTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTACTA
AATTGTATGAATGAGCTGCTTGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTG
GAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATCTACAGAGCTGCTACTCAAAA
CTTAAGGAACAACTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTG
CAAAAATTACAAAATATCATTGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGA
AAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATCAACTTGTTATGAACAAGAAA
GATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTG
AATGATTATGAATATCGTCAGAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTT
CTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTCCCCAAAAGAAGAAACCTAGA
GAAAGAGTAGATGATAGTACAGGAACTGTTATTTCCGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAAC
AGCATCAGAAAACAGTGGAGAATTTTGAAAAGTCATGTAGAAAAGCTTGATAACCAAGTT
TCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAATCTCACGACAAGACCATGAA
CAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAGCTTTTACAGCAGCAGCTCGCTACTGCATATGATGATGATACCACTTCACTATTA
CGAGACTGTTATTTGTTGGAAGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTTTTTAAA
GAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTACAGAAGCCGCTATTCGCCTG
GGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTCTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCA
GGAAGTTCTGATTGGGACAATCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAGCCTCAC
AGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTACTAAATCTCTTCCTGCTTCA
CCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATATCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAAT
CAAAAATGGAGTGTGGCATCAAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCC
TTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTACCT

ORF Protein

Cloned ORF protein sequence for pF1KSDA0923 Download

>KIAA0923  614 aa
MGDWMTVTDPGLSSESKTISQYTSETKMSPSSLYSQQVLCSSIPLSKNVHSFFSAFCTED
NIEQSISYLDQELTTFGFPSLYEESKGKETKRELNIVAVLNCMNELLVLQRKNLLAQENV
ETQNLKLGSDMDHLQSCYSKLKEQLETSRREMIGLQERDRQLQCKNRNLHQLLKNEKDEV
QKLQNIIASRATQYNHDMKRKEREYNKLKERLHQLVMNKKDKKIAMDILNYVGRADGKRG
SWRTGKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKKKPR
ERVDDSTGTVISDVEEDAGELSRESMWDLSCETVREQLTNSIRKQWRILKSHVEKLDNQV
SKVHLEGFNDEDVISRQDHEQETEKLELEIQQCKEMIKTQQQLLQQQLATAYDDDTTSLL
RDCYLLEEKERLKEEWSLFKEQKKNFERERRSFTEAAIRLGLERKAFEEERASWLKQQFL
NMTTFDHQNSENVKLFSAFSGSSDWDNLIVHSRQPQKKPHSVSNGSPVCMSKLTKSLPAS
PSTSDFCQTRSCISEHSSINVLNITAEEIKPNQVGGECTNQKWSVASRPGSQEGCYSGCS
LSYTNSHVEKDDLP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0923 Download

>pF1KSDA0923  4981 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACT
ATCTCTCAATATACCTCAGAAACAAAGATGTCTCCATCAAGTTTATACTCACAGCAAGTG
CTATGTTCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCAGTGCCTTCTGCACA
GAAGATAATATTGAACAGAGTATCTCATATCTTGATCAGGAATTGACTACTTTTGGTTTT
CCTTCATTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCT
GTACTAAATTGTATGAATGAGCTGCTTGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAA
AATGTGGAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATCTACAGAGCTGCTAC
TCAAAACTTAAGGAACAACTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGA
GACAGACAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGAT
GAGGTGCAAAAATTACAAAATATCATTGCAAGTCGAGCTACTCAGTATAATCATGATATG
AAGAGAAAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATCAACTTGTTATGAAC
AAGAAAGATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAA
AGAGGCTCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATT
CTCTTGAATGATTATGAATATCGTCAGAAACAAATCCTAATGGAAAATGCAGAACTTAAG
AAGGTTCTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTCCCCAAAAGAAGAAA
CCTAGAGAAAGAGTAGATGATAGTACAGGAACTGTTATTTCCGATGTTGAAGAAGATGCC
GGGGAACTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTT
ACAAACAGCATCAGAAAACAGTGGAGAATTTTGAAAAGTCATGTAGAAAAGCTTGATAAC
CAAGTTTCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAATCTCACGACAAGAC
CATGAACAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAA
ACTCAGCAACAGCTTTTACAGCAGCAGCTCGCTACTGCATATGATGATGATACCACTTCA
CTATTACGAGACTGTTATTTGTTGGAAGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTT
TTTAAAGAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTACAGAAGCCGCTATT
CGCCTGGGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAG
TTTCTAAATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCC
TTCTCAGGAAGTTCTGATTGGGACAATCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAG
CCTCACAGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTACTAAATCTCTTCCT
GCTTCACCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATATCTGAACATAGTTCA
ATCAATGTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGT
ACAAATCAAAAATGGAGTGTGGCATCAAGACCTGGATCACAGGAAGGTTGCTATAGTGGA
TGCTCCTTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTACCTTACGTAGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGCGAAATGACCGACCAAGC
GACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGG
GATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAG
GCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGA
CGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCT
GGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCC
TTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCG
GTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGC
TGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCA
CTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAG
TTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCT
CTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACC
ACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGA
TTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCA
CGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAG
TCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAA
ATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGT
ATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCC
ATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAA
GGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTAC
TCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAA
TCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTC
CCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG
TCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA
AGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAA
TCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACG
CCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTT
TGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCA
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