PNMA2 ORF clone FXC00671

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Flexi ORF Clone FXC00671

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Clone info.

Species

human

Clone Name

pF1KSDA0883 Sequence (with vector) Restriction Map

Product ID

FXC00671

HaloTag Clone PID

FHC00671

ORF Sequence

DNA sequence (1092 bp)
Protein sequence (364 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384031]

Gene

KIAA0883

Symbol

PNMA2

Alias : MA2, MM2, RGAG2

Description

paraneoplastic Ma antigen 2

Original Clone ID

hk07589

Features of the cloned ORF sequence

Description

Length: 1092 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 364 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34868.1 1.6e-139 100.0 PNMA2 CCDS9818.1 6.2e-61 48.6 PNMA1 CCDS65344.1 8.9e-61 49.7 PNMA3 CCDS35435.2 9.1e-61 49.7 PNMA3 CCDS14718.1 9.9e-58 46.7 PNMA5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR005162 207 281 PF03732 Retrotransposon gag protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011542667 364 603970 100.0 100.0 NP_009188 364 603970 100.0 100.0 NP_006020 353 604010 48.6 94.8 NP_001269464 455 300675 49.7 95.3 NP_037496 463 300675 49.7 95.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0883 Download

>KIAA0883  1092 bp
ATGGCGCTGGCACTGTTAGAGGACTGGTGCAGGATAATGAGTGTGGATGAGCAGAAGTCA
CTGATGGTTACGGGGATACCGGCGGACTTTGAGGAGGCTGAGATTCAGGAGGTCCTTCAG
GAGACTTTAAAGTCTCTGGGCAGGTATAGACTGCTTGGCAAGATATTCCGGAAGCAGGAG
AATGCCAATGCTGTCTTACTAGAGCTTCTGGAAGATACTGATGTCTCGGCCATTCCCAGT
GAGGTCCAGGGAAAGGGGGGTGTCTGGAAGGTGATCTTTAAGACCCCTAATCAGGACACT
GAGTTTCTTGAAAGATTGAACCTGTTTCTAGAAAAAGAGGGGCAGACGGTCTCGGGTATG
TTTCGAGCCCTGGGGCAGGAGGGCGTGTCTCCAGCCACAGTGCCCTGCATCTCACCAGAA
TTACTGGCCCATTTGTTGGGACAGGCAATGGCACATGCGCCTCAGCCCCTGCTACCCATG
AGATACCGGAAACTGCGAGTATTCTCAGGGAGTGCTGTCCCAGCCCCAGAGGAAGAGTCC
TTTGAGGTCTGGTTGGAACAGGCCACGGAGATAGTCAAAGAGTGGCCAGTAACAGAGGCA
GAAAAGAAAAGGTGGCTGGCGGAAAGCCTGCGGGGCCCTGCCCTGGACCTCATGCACATA
GTGCAGGCAGACAACCCGTCCATCAGTGTAGAAGAGTGTTTGGAGGCCTTTAAGCAAGTG
TTTGGGAGCCTAGAGAGCCGCAGGACAGCCCAGGTGAGGTATCTGAAGACCTATCAGGAG
GAAGGAGAGAAGGTCTCAGCCTATGTGTTACGGCTAGAAACCCTGCTCCGGAGAGCGGTG
GAGAAACGCGCCATCCCTCGGCGTATTGCGGACCAGGTCCGCCTGGAGCAGGTCATGGCT
GGGGCCACTCTTAACCAGATGCTGTGGTGCCGGCTTAGGGAGCTGAAGGATCAGGGCCCG
CCCCCCAGCTTCCTTGAGCTAATGAAGGTAATACGGGAAGAAGAGGAGGAAGAGGCCTCC
TTTGAGAATGAGAGTATCGAAGAGCCAGAGGAACGAGATGGCTATGGCCGCTGGAATCAT
GAGGGAGACGAC

ORF Protein

Cloned ORF protein sequence for pF1KSDA0883 Download

>KIAA0883  364 aa
MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE
NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQTVSGM
FRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPMRYRKLRVFSGSAVPAPEEES
FEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEAFKQV
FGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLEQVMA
GATLNQMLWCRLRELKDQGPPPSFLELMKVIREEEEEEASFENESIEEPEERDGYGRWNH
EGDD

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0883 Download

>pF1KSDA0883  4231 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGCGCTGGCACTGTTAGAGGACTGGTGCAGGATAATGAGTGTGGATGAGCAG
AAGTCACTGATGGTTACGGGGATACCGGCGGACTTTGAGGAGGCTGAGATTCAGGAGGTC
CTTCAGGAGACTTTAAAGTCTCTGGGCAGGTATAGACTGCTTGGCAAGATATTCCGGAAG
CAGGAGAATGCCAATGCTGTCTTACTAGAGCTTCTGGAAGATACTGATGTCTCGGCCATT
CCCAGTGAGGTCCAGGGAAAGGGGGGTGTCTGGAAGGTGATCTTTAAGACCCCTAATCAG
GACACTGAGTTTCTTGAAAGATTGAACCTGTTTCTAGAAAAAGAGGGGCAGACGGTCTCG
GGTATGTTTCGAGCCCTGGGGCAGGAGGGCGTGTCTCCAGCCACAGTGCCCTGCATCTCA
CCAGAATTACTGGCCCATTTGTTGGGACAGGCAATGGCACATGCGCCTCAGCCCCTGCTA
CCCATGAGATACCGGAAACTGCGAGTATTCTCAGGGAGTGCTGTCCCAGCCCCAGAGGAA
GAGTCCTTTGAGGTCTGGTTGGAACAGGCCACGGAGATAGTCAAAGAGTGGCCAGTAACA
GAGGCAGAAAAGAAAAGGTGGCTGGCGGAAAGCCTGCGGGGCCCTGCCCTGGACCTCATG
CACATAGTGCAGGCAGACAACCCGTCCATCAGTGTAGAAGAGTGTTTGGAGGCCTTTAAG
CAAGTGTTTGGGAGCCTAGAGAGCCGCAGGACAGCCCAGGTGAGGTATCTGAAGACCTAT
CAGGAGGAAGGAGAGAAGGTCTCAGCCTATGTGTTACGGCTAGAAACCCTGCTCCGGAGA
GCGGTGGAGAAACGCGCCATCCCTCGGCGTATTGCGGACCAGGTCCGCCTGGAGCAGGTC
ATGGCTGGGGCCACTCTTAACCAGATGCTGTGGTGCCGGCTTAGGGAGCTGAAGGATCAG
GGCCCGCCCCCCAGCTTCCTTGAGCTAATGAAGGTAATACGGGAAGAAGAGGAGGAAGAG
GCCTCCTTTGAGAATGAGAGTATCGAAGAGCCAGAGGAACGAGATGGCTATGGCCGCTGG
AATCATGAGGGAGACGACTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAG
GCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAA
GGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTC
CGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACA
GGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCG
ACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCT
CATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGT
GTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAG
TCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGC
AGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTAC
ACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGA
GTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGC
AAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACG
GGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCA
AAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGG
CCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTA
ATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGA
TTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGC
TGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGC
CCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGAT
CGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAG
AATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTG
AAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAG
GCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTT
GTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAA
GCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAA
GCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTT
TCTAAATACATTCAAATATGTATCCGCTCAT