Gene/Protein Characteristic Table for KIAA1232
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Product ID ORK04789
Accession No AB033058
Description discs, large homolog 3 (Drosophila)
Clone name fh08445
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5072 bp)
Predicted protein sequence (520 aa)
Source Human fetal brain
Rouge ID mKIAA1232 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5072 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 3218 bp
Genome contig ID gi89161218f_69488880
PolyA signal sequence
(AATAAA,-22)
+----*----+----*----+----*----+----
CTACCCATGAATAAATAAAATATTTGTTCAAGCAC
Flanking genome sequence
(153184 - 153233)
----+----*----+----*----+----*----+----*----+----*
AAATGACCAGCTTTGTCTTAAGTCGAAAGTGCTTCTAGAAATCAGCTAAT
Features of the protein sequence
Description

Length: 520 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
CAI41023 3.1e-201 100.0 discs, large ho...
Homo sapiens
CAM15072 1.7e-199 99.0 discs, large ho...
Mus musculus
XP_856747 4e-197 98.4 similar to syna...
Canis lupus fam...
EDL14166 1.2e-181 99.6 discs, large ho...
Mus musculus
XP_001175236 1.9e-149 78.7 chapsyn-110 iso...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB011155 3.4e-07 27.2 KIAA0583
AB051506 4.1e-05 23.2 KIAA1719
D63481 9.4e-05 37.4 KIAA0147
AB040959 0.00051 39.7 KIAA1526
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001452 176 234 PD000066 Src homology-3
FPrintScan IPR001452 175 185 PR00452 Src homology-3
IPR001452 194 209 PR00452 Src homology-3
IPR001452 211 220 PR00452 Src homology-3
HMMPfam IPR001478 57 135 PF00595 PDZ/DHR/GLGF
IPR001452 175 234 PF00018 Src homology-3
IPR008144 363 465 PF00625 Guanylate kinase
HMMSmart IPR001478 65 138 SM00228 PDZ/DHR/GLGF
IPR001452 175 241 SM00326 Src homology-3
IPR008145 329 508 SM00072 Guanylate kinase/L-type calcium channel region
ProfileScan IPR001478 57 138 PS50106 PDZ/DHR/GLGF
IPR001452 172 242 PS50002 Src homology-3
IPR008144 330 505 PS50052 Guanylate kinase
ScanRegExp IPR008144 362 379 PS00856 Guanylate kinase
Expression profile
Description

RT-PCR
RT-PCR-ELISA
Experimental conditions
Primer_f
Primer_r
PCR conditions °C sec °C sec cycles

RH mapping information
Description

Chromosome No. X
Experimental conditions
Panel name GeneBridge 4
Primer_f AAGAACATTCAGCCCCAGCAC
Primer_r GCAGTGTTAAGGGTGTGTCTC
PCR product length 76 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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