hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21034146/chunk_1/iprscan-20080501-21034146.nocrc
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Query sequence: KIAA1232
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00625.11.ls Guanylate kinase                          184.8    1.9e-52   1
PF00625.11.fs Guanylate kinase                          182.9    7.5e-52   1
PF00595.14.ls PDZ domain (Also known as DHR or GLGF)    104.1    3.8e-28   1
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)    102.2    4.5e-28   1
PF00018.18.fs SH3 domain                                 34.5    1.2e-08   1
PF07653.7.fs  Variant SH3 domain                         26.9    4.3e-07   1
PF07653.7.ls  Variant SH3 domain                         28.7    1.9e-05   1
PF00018.18.ls SH3 domain                                 28.3      2e-05   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00595.14.fs   1/1      57   135 ..     1    86 []   102.2  4.5e-28
PF00595.14.ls   1/1      57   135 ..     1    86 []   104.1  3.8e-28
PF00018.18.ls   1/1     175   241 ..     1    59 []    28.3    2e-05
PF00018.18.fs   1/1     175   234 ..     1    53 [.    34.5  1.2e-08
PF07653.7.ls    1/1     176   240 ..     1    69 []    28.7  1.9e-05
PF07653.7.fs    1/1     176   240 ..     1    69 []    26.9  4.3e-07
PF00625.11.fs   1/1     363   465 ..     1   107 []   182.9  7.5e-52
PF00625.11.ls   1/1     363   465 ..     1   107 []   184.8  1.9e-52

Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 1, from 57 to 135: score 102.2, E = 4.5e-28
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +++l+k  +  glGf+i+gg+d+   +gifvs +l+G g+A+ +G+L
    KIAA1232    57    KIILHK--GSTGLGFNIVGGEDG---EGIFVSFILAG-GPADLSGEL 97   

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                   + GD+IlsvNG++l+n +he+a++alk++g+ +vt++ +   
    KIAA1232    98 RRGDRILSVNGVNLRNATHEQAAAALKRAGQ-SVTIVAQ    135  

PF00595.14.ls: domain 1 of 1, from 57 to 135: score 104.1, E = 3.8e-28
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +++l+k  +  glGf+i+gg+d+   +gifvs +l+G g+A+ +G+L
    KIAA1232    57    KIILHK--GSTGLGFNIVGGEDG---EGIFVSFILAG-GPADLSGEL 97   

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                   + GD+IlsvNG++l+n +he+a++alk++g+ +vt++ +   
    KIAA1232    98 RRGDRILSVNGVNLRNATHEQAAAALKRAGQ-SVTIVAQ    135  

PF00018.18.ls: domain 1 of 1, from 175 to 241: score 28.3, E = 2e-05
                   *->kkvvALYDYeare.....sdELsFkkGDvitvleksddpgWWkgrlk
                       +v+AL+DY+ + ++  +s+ LsF  GD+++v++ sdd +WW +rl 
    KIAA1232   175    LYVRALFDYDRTRdsclpSQGLSFSYGDILHVINASDD-EWWQARLV 220  

                   gtgG...keGliPs.NYVepv<-*
                   + +G++++ G iPs+  Ve++   
    KIAA1232   221 TPHGeseQIGVIPSkKRVEKK    241  

PF00018.18.fs: domain 1 of 1, from 175 to 234: score 34.5, E = 1.2e-08
                   *->kkvvALYDYeare.....sdELsFkkGDvitvleksddpgWWkgrlk
                       +v+AL+DY+ + ++  +s+ LsF  GD+++v++ sdd +WW +rl 
    KIAA1232   175    LYVRALFDYDRTRdsclpSQGLSFSYGDILHVINASDD-EWWQARLV 220  

                   gtgG...keGliPs<-*
                   + +G++++ G iPs   
    KIAA1232   221 TPHGeseQIGVIPS    234  

PF07653.7.ls: domain 1 of 1, from 176 to 240: score 28.7, E = 1.9e-05
                   *->ygraiedyva.AtdknenleeeeLslkkGdvvkVidvggskdddgww
                      y+ra++dy+ +  ++ +   +  Ls+  Gd+++Vi    + +dd+ww
    KIAA1232   176    YVRALFDYDRtRDSCLP---SQGLSFSYGDILHVI----NASDDEWW 215  

                   egeslgg.....GrrrRGlvPssaveel<-*
                   ++++   +++++ +   G++Ps+ + e    
    KIAA1232   216 QARL-VTphgesEQI--GVIPSKKRVEK    240  

PF07653.7.fs: domain 1 of 1, from 176 to 240: score 26.9, E = 4.3e-07
                   *->ygraiedyva.AtdknenleeeeLslkkGdvvkVidvggskdddgww
                      y+ra++dy+ +  ++ +   +  Ls+  Gd+++Vi    + +dd+ww
    KIAA1232   176    YVRALFDYDRtRDSCLP---SQGLSFSYGDILHVI----NASDDEWW 215  

                   egeslgg.....GrrrRGlvPssaveel<-*
                   ++++   +++++ +   G++Ps+ + e    
    KIAA1232   216 QARL-VTphgesEQI--GVIPSKKRVEK    240  

PF00625.11.fs: domain 1 of 1, from 363 to 465: score 182.9, E = 7.5e-52
                   *->TRpPRpgEvdGkDYhFVsSrEemekdIsaneFLEyaefnGNyYGTsk
                      TRp R  EvdG DYhFV SrE+mekdI+ n+F+E+++fn+N+YGTs 
    KIAA1232   363    TRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSI 409  

                   eaVrqvaksGkiciLDvepQGvkqlrtaelsNPvsvFIaPpSlqelekrL
                   ++Vr+va+ Gk+ciLDv+ +++k+l++a+l+ P+++FI+P+S    e  +
    KIAA1232   410 QSVRAVAERGKHCILDVSGNAIKRLQQAQLY-PIAIFIKPKS---IEALM 455  

                   rgrnketEEs<-*
                   +++++ t E+   
    KIAA1232   456 EMNRRQTYEQ    465  

PF00625.11.ls: domain 1 of 1, from 363 to 465: score 184.8, E = 1.9e-52
                   *->TRpPRpgEvdGkDYhFVsSrEemekdIsaneFLEyaefnGNyYGTsk
                      TRp R  EvdG DYhFV SrE+mekdI+ n+F+E+++fn+N+YGTs 
    KIAA1232   363    TRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSI 409  

                   eaVrqvaksGkiciLDvepQGvkqlrtaelsNPvsvFIaPpSlqelekrL
                   ++Vr+va+ Gk+ciLDv+ +++k+l++a+l+ P+++FI+P+S    e  +
    KIAA1232   410 QSVRAVAERGKHCILDVSGNAIKRLQQAQLY-PIAIFIKPKS---IEALM 455  

                   rgrnketEEs<-*
                   +++++ t E+   
    KIAA1232   456 EMNRRQTYEQ    465  

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