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Gene/Protein Characteristic Table for KIAA0463

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Product ID	ORK00542
Accession No	AB007932
Description	plexin A2
Clone name	hg00942
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (6263 bp) Predicted protein sequence (1963 aa)
HaloTag ORF Clone	FHC00542
Flexi ORF Clone	FXC00542
Source	Human adult brain
Rouge ID	mKIAA0463 by Kazusa Mouse cDNA Project

Length: 6263 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1963 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001627	119	560	PF01403	Semaphorin/CD100 antigen
	IPR002165	579	629	PF01437	Plexin
	IPR002165	724	771	PF01437	Plexin
	IPR002165	872	925	PF01437	Plexin
	IPR002909	927	1020	PF01833	Cell surface receptor IPT/TIG
	IPR002909	1023	1106	PF01833	Cell surface receptor IPT/TIG
	IPR002909	1110	1208	PF01833	Cell surface receptor IPT/TIG
	IPR002909	1212	1297	PF01833	Cell surface receptor IPT/TIG
	IPR013548	1379	1933	PF08337	Plexin cytoplasmic region
HMMSmart	IPR001627	119	561	SM00630	Semaphorin/CD100 antigen
	IPR003659	579	629	SM00423	Plexin/semaphorin/integrin
	IPR003659	724	771	SM00423	Plexin/semaphorin/integrin
	IPR003659	872	925	SM00423	Plexin/semaphorin/integrin
	IPR002909	926	1021	SM00429	Cell surface receptor IPT/TIG
	IPR002909	1022	1107	SM00429	Cell surface receptor IPT/TIG
	IPR002909	1109	1209	SM00429	Cell surface receptor IPT/TIG
	IPR002909	1211	1306	SM00429	Cell surface receptor IPT/TIG
ProfileScan	IPR001627	94	577	PS51004	Semaphorin/CD100 antigen

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	81	EVDSRSVVLLSVVWVLLAPPAAG	103	PRIMARY	23
	2	128	TGAVYVGAINRVYKLTGNLTIQV	150	SECONDARY	23
	3	1307	AIVSIAAGGSLLLIIVIIVLIA	1328	PRIMARY	22

Experimental conditions

Chromosome No. 1
Experimental conditions

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