hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03435779/chunk_1/iprscan-20080502-03435779.nocrc
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Query sequence: KIAA0463
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 452.8   1.7e-131   1
SM00429                                                 311.7    5.1e-89   4
SM00423                                                 135.7    4.9e-36   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1     119   561 ..     1   532 []   452.8 1.7e-131
SM00423    1/3     579   629 ..     1    56 []    55.3  7.9e-12
SM00423    2/3     724   771 ..     1    56 []    36.6  3.3e-06
SM00423    3/3     872   925 ..     1    56 []    43.8  2.3e-08
SM00429    1/4     926  1021 ..     1   111 []    88.8  6.5e-22
SM00429    2/4    1022  1107 ..     1   111 []    98.9  5.9e-25
SM00429    3/4    1109  1209 ..     1   111 []    91.7  8.7e-23
SM00429    4/4    1211  1306 ..     1   111 []    32.3  6.6e-05

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 119 to 561: score 452.8, E = 1.7e-131
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      fnhl ++ ++g   +yVGA Nr+y+L+  nl+ +  ++tgp++d++s
    KIAA0463   119    FNHLTVHQGTG--AVYVGAINRVYKLT-GNLTIQVAHKTGPEEDNKS 162  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                   c++         + +++    Cs+ +t+++N++++L++d+    +++L++
    KIAA0463   163 CYP---------PLIVQP---CSEVLTLTNNVNKLLIIDYS---ENRLLA 197  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CG++++g+   C l++l+d          ++il++++++ke++ls +++ 
    KIAA0463   198 CGSLYQGV---CKLLRLDD----------LFILVEPSHKKEHYLSSVNKT 234  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   + +y++ ++s +  ++ ++   g+  +g+  +f++  ls s++ p+  +s
    KIAA0463   235 GTMYGVIVRSEGEDGKLFI---GTAVDGKQDYFPT--LS-SRKLPRDPES 278  

                   lgttqdgfefefhslrttiydskwg.ydlnepnFVyaFeipesgdgdfVY
                     + +++++++f+s+ ++i++++++ ++++++ ++y+F++     g fVY
    KIAA0463   279 SAMLDYELHSDFVSSLIKIPSDTLAlVSHFDIFYIYGFAS-----GGFVY 323  

                   FFFrEtaveainr.dcssekavvsRVARvCknDvGGqrlLqkkWtSFLKa
                   F++++++++ + + + +++ +++sR++R+Ck+D        +k++S++ +
    KIAA0463   324 FLTVQPETPEGVAiNSAGDLFYTSRIVRLCKDD--------PKFHSYVSL 365  

                   rLnCsvpgkggvrefyFneLQavfllppGa.LArelgi.esddvlYgVFs
                   +  C+   + gv+   +++LQa++l++pG++LA+  +i+ +ddvl+++Fs
    KIAA0463   366 PFGCT---RAGVE---YRLLQAAYLAKPGDsLAQAFNItSQDDVLFAIFS 409  

                   qgqqtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpve
                   +gq+        p   SA+CaF+++ In  ++ + ++cy+g    ++ +e
    KIAA0463   410 KGQKQYH----HPPDDSALCAFPIRAINLQIKGRLQSCYQG----EGNLE 451  

                   gnkvPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpPl
                      +++   ++           +++  ++P+d+++++ d ++++++++P+
    KIAA0463   452 ---LNWLLGKDV----------QCTKAPVPIDDNFCGLDINQPLGGSTPV 488  

                   tgrPllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvvv
                   +g  l++    ++r+Ts+a ++++g       y V+F+GT +G+++K++ 
    KIAA0463   489 EGLTLYTTS--RDRMTSVASYVYNG-------YSVVFVGTKSGKLKKIRA 529  

                   srsssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   ++  +         v++e ++v ++gs+++rdm++s ++   
    KIAA0463   530 DGPPH-------GGVQYEMVSVLKDGSPILRDMAFSIDQ    561  

SM00423: domain 1 of 3, from 579 to 629: score 55.3, E = 7.9e-12
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrgerCderrgsrqnw
                       C+qy  t+C+eCl+++dp+ CgWC+++++C+r+  C       q w
    KIAA0463   579    SCEQY--TTCGECLSSGDPH-CGWCALHNMCSRRDKCQ------QAW 616  

                   ssg....pssqCp<-*
                   +  +     sqC    
    KIAA0463   617 EPNrfaaSISQCV    629  

SM00423: domain 2 of 3, from 724 to 771: score 36.6, E = 3.3e-06
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrg.erCderrgsrqn
                      +Cs++  + C +C+ +  +  C+WC++++ Ct+ +  C+ ++g r n
    KIAA0463   724    NCSAH--QLCLSCVNSAFR--CHWCKYRNLCTHDpTTCSFQEG-RIN 765  

                   wssgpssqCp<-*
                   +s      Cp   
    KIAA0463   766 ISE----DCP    771  

SM00423: domain 3 of 3, from 872 to 925: score 43.8, E = 2.3e-08
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrgerCderrgsrqnw
                       C++++  sC+ Cl a+  ++CgWCs+e+rCt +++C++   + ++w
    KIAA0463   872    KCAAQR-ESCGLCLKADRKFECGWCSGERRCTLHQHCTS---PSSPW 914  

                   ssg..pssqCp<-*
                   +++++++ +C+   
    KIAA0463   915 LDWssHNVKCS    925  

SM00429: domain 1 of 4, from 926 to 1021: score 88.8, E = 6.5e-22
                   *->dPvItrisPssGplsGGteritlcGknLdsdgsvvfvrvgvgGrvWe
                      +P It+i   sGp +GGt r+t++G nL+ d+s++ + v v+    +
    KIAA0463   926    NPQITEILTVSGPPEGGT-RVTIHGVNLGLDFSEIAHHVQVA----G 967  

                   vpCtflpsdvhGkdsstaivCrtPpylnqspgpgsvpvrvtgevgfdngg
                   vpCt+lp +++    +++ivC+++++l+   g+ s+pvr+  ++g +  +
    KIAA0463   968 VPCTPLPGEYI---IAEQIVCEMGHALV---GTTSGPVRL--CIGECKPE 1009 

                   vrtelsppspFtYv<-*
                   ++t+  + +++t+v   
    KIAA0463  1010 FMTK--SHQQYTFV    1021 

SM00429: domain 2 of 4, from 1022 to 1107: score 98.9, E = 5.9e-25
                   *->dPvItrisPssGplsGGteritlcGknLdsdgsvvfvrvgvgGrvWe
                      +P++++++P +Gp sGGt  +t++G++L++ gs+v v++g      +
    KIAA0463  1022    NPSVLSLNPIRGPESGGT-MVTITGHYLGA-GSSVAVYLG------N 1060 

                   vpCtflpsdvhGkdsstaivCrtPpylnqspgpgsvpvrvtgevgfdngg
                   + C+f  +      s+++ivC++Pp++n   g g+vpv    +v++d+++
    KIAA0463  1061 QTCEFYGR------SMSEIVCVSPPSSN---GLGPVPV----SVSVDRAH 1097 

                   vrtelsppspFtYv<-*
                   v++    +++F+Y    
    KIAA0463  1098 VDS----NLQFEYI    1107 

SM00429: domain 3 of 4, from 1109 to 1209: score 91.7, E = 8.7e-23
                   *->dPvItrisPssGplsGGteritlcGknLdsdgsvvfvrvgvgGr.vW
                      dP+++ri+P+++++sG t  +t++G nLd+ ++++++rv+ +G++  
    KIAA0463  1109    DPRVQRIEPEWSIASGHT-PLTITGFNLDV-IQEPRIRVKFNGKeS- 1152 

                   evpCtflpsdvhGkdsstaivCrtPpylnqsp.gpgsvpvrvtgevgfdn
                    + C+++++        t+++C +P+ ++++++g  +v+ ++  e+gf  
    KIAA0463  1153 VNVCKVVNT--------TTLTCLAPSLTTDYRpGLDTVERPD--EFGFVF 1192 

                   ggvrtel.sppspFtYv<-*
                    +v+++l  ++  F Y+   
    KIAA0463  1193 NNVQSLLiYNDTKFIYY    1209 

SM00429: domain 4 of 4, from 1211 to 1306: score 32.3, E = 6.6e-05
                   *->dPvItrisPssGplsGGteritlcGknLds...dgsvvfvrvgvgGr
                      +P+++ +sP+    +   + i l+GknL ++ + g    ++v  g  
    KIAA0463  1211    NPTFELLSPTGVLDQKPGSPIILKGKNLCPpasGGAKLNYTVLIG-- 1255 

                   vWevpCtflpsdvhGkdsstaivCrtPpylnqspgpgsvpvrvtgevgf.
                     e+pC ++        s+t+++C+ P  ++q  + + v+v +   v+ +
    KIAA0463  1256 --ETPCAVTV-------SETQLLCEPPNLTGQ--HKVMVHVGG--MVFSp 1292 

                   dnggvrtelsppspFtYv<-*
                   ++  v ++    s +t     
    KIAA0463  1293 GSVSVISD----SLLTLP    1306 

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