Gene/Protein Characteristic Table for KIAA0176
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Product ID ORK05577
Accession No D79998
Description potassium channel tetramerization domain containing 2
Clone name ha03941
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (3635 bp)
Predicted protein sequence (265 aa)
Source Myeloblast cell line (KG-1)
Features of the cloned cDNA sequence

Length: 3635 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2837 bp
Genome contig ID gi51511734f_70455104
PolyA signal sequence
Flanking genome sequence
(118472 - 118521)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 17 f 70554935 70573574 6 99.1 Perfect prediction
Features of the protein sequence

Length: 265 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14681 3.2e-87 100.0 BTB/POZ domain-...
Homo sapiens
AAI60142 1.1e-86 99.6 Potassium chann...
synthetic construct
XP_001138510 4.2e-86 99.2 potassium chann...
Pan troglodytes
XP_001092438 3e-85 98.1 similar to pota...
Macaca mulatta
XP_852044 1.5e-84 97.3 similar to Pota...
Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR003131 76 169 PF02214 K+ channel tetramerisation
HMMSmart IPR000210 74 177 SM00225 BTB/POZ-like
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 17
Experimental conditions
Panel name Genebridge 4
PCR product length 154 bp
PCR conditions 95 °C15 sec68 °C60 sec30 cycles
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