# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha03941.fasta.nr -Q ../query/KIAA0176.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0176, 265 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7819541 sequences Expectation_n fit: rho(ln(x))= 5.6651+/-0.000197; mu= 8.3152+/- 0.011 mean_var=109.5526+/-20.998, 0's: 41 Z-trim: 55 B-trim: 215 in 1/67 Lambda= 0.122536 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|50403777|sp|Q14681.2|KCTD2_HUMAN RecName: Full= ( 263) 1790 326.3 3.2e-87 gi|182888365|gb|AAI60142.1| Potassium channel tetr ( 263) 1780 324.5 1.1e-86 gi|114670388|ref|XP_001138510.1| PREDICTED: potass ( 263) 1769 322.6 4.2e-86 gi|109118144|ref|XP_001092438.1| PREDICTED: simila ( 263) 1753 319.8 3e-85 gi|73965046|ref|XP_852044.1| PREDICTED: similar to ( 444) 1743 318.2 1.5e-84 gi|66364447|gb|AAH95988.1| Potassium channel tetra ( 263) 1707 311.6 8.4e-83 gi|53829372|ref|NP_899108.2| potassium channel tet ( 263) 1694 309.3 4.1e-82 gi|123251597|emb|CAM22615.1| potassium channel tet ( 338) 1654 302.4 6.6e-80 gi|123251598|emb|CAM22616.1| potassium channel tet ( 277) 1620 296.3 3.7e-78 gi|119609636|gb|EAW89230.1| potassium channel tetr ( 214) 1459 267.7 1.1e-69 gi|169211992|ref|XP_001719323.1| PREDICTED: simila ( 514) 1459 268.1 2.1e-69 gi|194675697|ref|XP_001788934.1| PREDICTED: simila ( 367) 1431 263.0 5.2e-68 gi|23272394|gb|AAH33329.1| KCTD2 protein [Homo sap ( 245) 1384 254.5 1.2e-65 gi|53133804|emb|CAG32231.1| hypothetical protein [ ( 247) 1291 238.1 1.1e-60 gi|112418868|gb|AAI22219.1| Zgc:153278 [Danio reri ( 267) 1236 228.4 9.9e-58 gi|50401040|sp|Q8CEZ0.1|KCTD2_MOUSE RecName: Full= ( 266) 1127 209.1 6.2e-52 gi|194216674|ref|XP_001492500.2| PREDICTED: simila ( 194) 1109 205.8 4.5e-51 gi|73959457|ref|XP_547178.2| PREDICTED: similar to ( 234) 1110 206.0 4.6e-51 gi|50401090|sp|Q8VC57.1|KCTD5_MOUSE RecName: Full= ( 234) 1110 206.0 4.6e-51 gi|74150666|dbj|BAE25476.1| unnamed protein produc ( 234) 1106 205.3 7.5e-51 gi|42542883|gb|AAH66418.1| Zgc:77244 [Danio rerio] ( 224) 1102 204.6 1.2e-50 gi|194219331|ref|XP_001498378.2| PREDICTED: simila ( 234) 1101 204.5 1.4e-50 gi|149051987|gb|EDM03804.1| potassium channel tetr ( 234) 1101 204.5 1.4e-50 gi|109489381|ref|XP_573223.2| PREDICTED: similar t ( 272) 1101 204.5 1.5e-50 gi|148745326|gb|AAI42482.1| KCTD5 protein [Bos tau ( 234) 1094 203.2 3.2e-50 gi|119605896|gb|EAW85490.1| potassium channel tetr ( 203) 1091 202.6 4.2e-50 gi|89273905|emb|CAJ82597.1| potassium channel tetr ( 216) 1091 202.7 4.4e-50 gi|50401182|sp|Q9NXV2.1|KCTD5_HUMAN RecName: Full= ( 234) 1090 202.5 5.3e-50 gi|50755761|ref|XP_414889.1| PREDICTED: hypothetic ( 231) 1087 202.0 7.6e-50 gi|50604158|gb|AAH77515.1| Kctd2-prov protein [Xen ( 216) 1082 201.1 1.3e-49 gi|126335351|ref|XP_001371853.1| PREDICTED: simila ( 316) 1082 201.2 1.7e-49 gi|50370190|gb|AAH76863.1| Kctd5-prov protein [Xen ( 216) 1071 199.1 5.1e-49 gi|109492228|ref|XP_001081684.1| PREDICTED: simila ( 167) 1033 192.3 4.5e-47 gi|115709863|ref|XP_782051.2| PREDICTED: similar t ( 234) 1009 188.2 1.1e-45 gi|210086364|gb|EEA34785.1| hypothetical protein B ( 226) 998 186.2 4.1e-45 gi|148697731|gb|EDL29678.1| mCG13350, isoform CRA_ ( 220) 993 185.3 7.4e-45 gi|149065998|gb|EDM15871.1| similar to hypothetica ( 220) 989 184.6 1.2e-44 gi|157279213|gb|AAI34647.1| KCTD17 protein [Bos ta ( 208) 986 184.1 1.7e-44 gi|148702543|gb|EDL34490.1| potassium channel tetr ( 150) 971 181.3 8.4e-44 gi|118082765|ref|XP_416282.2| PREDICTED: similar t ( 220) 968 180.9 1.6e-43 gi|109094074|ref|XP_001085432.1| PREDICTED: simila ( 247) 964 180.3 2.8e-43 gi|109094072|ref|XP_001085680.1| PREDICTED: simila ( 290) 964 180.3 3.1e-43 gi|109094070|ref|XP_001085557.1| PREDICTED: simila ( 314) 964 180.4 3.3e-43 gi|119580542|gb|EAW60138.1| potassium channel tetr ( 254) 958 179.2 5.9e-43 gi|119580543|gb|EAW60139.1| potassium channel tetr ( 297) 958 179.3 6.6e-43 gi|205371782|sp|Q8N5Z5.3|KCD17_HUMAN RecName: Full ( 321) 958 179.3 7e-43 gi|114686284|ref|XP_515110.2| PREDICTED: similar t ( 247) 953 178.3 1.1e-42 gi|10433672|dbj|BAB14007.1| unnamed protein produc ( 290) 953 178.4 1.2e-42 gi|148697728|gb|EDL29675.1| mCG13350, isoform CRA_ ( 246) 952 178.1 1.2e-42 gi|119580544|gb|EAW60140.1| potassium channel tetr ( 314) 953 178.4 1.3e-42 >>gi|50403777|sp|Q14681.2|KCTD2_HUMAN RecName: Full=BTB/ (263 aa) initn: 1790 init1: 1790 opt: 1790 Z-score: 1722.1 bits: 326.3 E(): 3.2e-87 Smith-Waterman score: 1790; 100.000% identity (100.000% similar) in 263 aa overlap (3-265:1-263) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 MAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::::::::::: gi|504 NNSTNGIVIEPSEKAKILQERGSRM 240 250 260 >>gi|182888365|gb|AAI60142.1| Potassium channel tetramer (263 aa) initn: 1780 init1: 1780 opt: 1780 Z-score: 1712.5 bits: 324.5 E(): 1.1e-86 Smith-Waterman score: 1780; 99.620% identity (99.620% similar) in 263 aa overlap (3-265:1-263) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|182 MAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::::::::::: gi|182 NNSTNGIVIEPSEKAKILQERGSRM 240 250 260 >>gi|114670388|ref|XP_001138510.1| PREDICTED: potassium (263 aa) initn: 1769 init1: 1769 opt: 1769 Z-score: 1702.0 bits: 322.6 E(): 4.2e-86 Smith-Waterman score: 1769; 99.240% identity (99.240% similar) in 263 aa overlap (3-265:1-263) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG :::::::::::::::::::::::: :::::::::::::::::::::::::::: :::: gi|114 MAELQLDPAMAGLGGGGGSGVGDGCGPVRGPPSPRPAGPTPRGHGRPAAAVAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::::::::::: gi|114 NNSTNGIVIEPSEKAKILQERGSRM 240 250 260 >>gi|109118144|ref|XP_001092438.1| PREDICTED: similar to (263 aa) initn: 1753 init1: 1753 opt: 1753 Z-score: 1686.7 bits: 319.8 E(): 3e-85 Smith-Waterman score: 1753; 98.099% identity (98.479% similar) in 263 aa overlap (3-265:1-263) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|109 MAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::: .:::::::::::::::::::::::: gi|109 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGKSTDAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::::::::::: gi|109 NNSTNGIVIEPSEKAKILQERGSRM 240 250 260 >>gi|73965046|ref|XP_852044.1| PREDICTED: similar to Pot (444 aa) initn: 1743 init1: 1743 opt: 1743 Z-score: 1674.3 bits: 318.2 E(): 1.5e-84 Smith-Waterman score: 1743; 97.348% identity (98.106% similar) in 264 aa overlap (2-265:181-444) 10 20 30 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVR :::::::::::::::::::::.:::::: : gi|739 HPRRWAGPALPAERWAGPAARGQQRRRRRPKMAELQLDPAMAGLGGGGGSGLGDGGGPGR 160 170 180 190 200 210 40 50 60 70 80 90 KIAA01 GPPSPRPAGPTPRGHGRPAAAVAQRLEPGPGPPERAGGGGAARWVRLNVGGTYFVTTRQT ::::::::::::::::: ::.: ::::::::::::::::::::::::::::::::::: gi|739 GPPSPRPAGPTPRGHGRQPAAAAPPLEPGPGPPERAGGGGAARWVRLNVGGTYFVTTRQT 220 230 240 250 260 270 100 110 120 130 140 150 KIAA01 LGREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKLIITKELAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LGREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKLIITKELAEE 280 290 300 310 320 330 160 170 180 190 200 210 KIAA01 GVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWK 340 350 360 370 380 390 220 230 240 250 260 KIAA01 FEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM 400 410 420 430 440 >>gi|66364447|gb|AAH95988.1| Potassium channel tetrameri (263 aa) initn: 1707 init1: 1707 opt: 1707 Z-score: 1642.8 bits: 311.6 E(): 8.4e-83 Smith-Waterman score: 1707; 95.817% identity (98.099% similar) in 263 aa overlap (3-265:1-263) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG :::::::::.:::::::.:..::::: :::::::::::::::::: ::.:: :::: gi|663 MAELQLDPAVAGLGGGGSSAMGDGGGSGRGPPSPRPAGPTPRGHGRQPAAAAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 PGPPERTGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::::::::::: gi|663 NNSTNGIVIEPSEKAKILQERGSRM 240 250 260 >>gi|53829372|ref|NP_899108.2| potassium channel tetrame (263 aa) initn: 1694 init1: 1694 opt: 1694 Z-score: 1630.4 bits: 309.3 E(): 4.1e-82 Smith-Waterman score: 1694; 95.057% identity (97.719% similar) in 263 aa overlap (3-265:1-263) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG :::::::::.:::::::.:..::::: :::::::::::::::::: ::.:: :::: gi|538 MAELQLDPAVAGLGGGGSSAMGDGGGSGRGPPSPRPAGPTPRGHGRQPAAAAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|538 PGPPERTGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|538 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::. ::::::::::::::::::::::::::::::::: gi|538 SQGPVKHVYRVLQCQEEELTQMVSTIFDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::::::::::: gi|538 NNSTNGIVIEPSEKAKILQERGSRM 240 250 260 >>gi|123251597|emb|CAM22615.1| potassium channel tetrame (338 aa) initn: 1767 init1: 1654 opt: 1654 Z-score: 1590.8 bits: 302.4 E(): 6.6e-80 Smith-Waterman score: 1654; 95.294% identity (98.039% similar) in 255 aa overlap (3-257:1-255) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG :::::::::.:::::::.:..::::: :::::::::::::::::: ::.:: :::: gi|123 MAELQLDPAVAGLGGGGSSAMGDGGGSGRGPPSPRPAGPTPRGHGRQPAAAAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PGPPERTGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM ::::::::::::::::. gi|123 NNSTNGIVIEPSEKAKVGHCFFPPAVLCLPVPSSLQLCQVAAGFLPLLLQLRASSHHTLL 240 250 260 270 280 290 >>gi|123251598|emb|CAM22616.1| potassium channel tetrame (277 aa) initn: 1620 init1: 1620 opt: 1620 Z-score: 1559.4 bits: 296.3 E(): 3.7e-78 Smith-Waterman score: 1620; 95.582% identity (97.992% similar) in 249 aa overlap (8-256:1-249) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG ::::.:::::::.:..::::: :::::::::::::::::: ::.:: :::: gi|123 LDPAVAGLGGGGSSAMGDGGGSGRGPPSPRPAGPTPRGHGRQPAAAAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PGPPERTGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL 180 190 200 210 220 230 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM :::::::::::::::: gi|123 NNSTNGIVIEPSEKAKCPADTHYTLVKNLCADCEPLSLTWKTLV 240 250 260 270 >>gi|119609636|gb|EAW89230.1| potassium channel tetramer (214 aa) initn: 1532 init1: 1459 opt: 1459 Z-score: 1407.0 bits: 267.7 E(): 1.1e-69 Smith-Waterman score: 1459; 99.061% identity (99.531% similar) in 213 aa overlap (3-215:1-213) 10 20 30 40 50 60 KIAA01 SKMAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQRLEPG ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|119 MAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQPLEPG 10 20 30 40 50 70 80 90 100 110 120 KIAA01 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSREL ::::::::::::::::::::::::::::::::::. gi|119 SQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQVH 180 190 200 210 250 260 KIAA01 NNSTNGIVIEPSEKAKILQERGSRM 265 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 02:27:12 2009 done: Wed Mar 4 02:32:34 2009 Total Scan time: 1337.960 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]