hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19281493/chunk_1/iprscan-20080501-19281493.nocrc
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Query sequence: KIAA0176
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02214.13.fs K+ channel tetramerisation domain              111.0    6.2e-33   1
PF02214.13.ls K+ channel tetramerisation domain              112.9    8.5e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02214.13.fs   1/1      76   169 ..     1   102 []   111.0  6.2e-33
PF02214.13.ls   1/1      76   169 ..     1   102 []   112.9  8.5e-31

Alignments of top-scoring domains:
PF02214.13.fs: domain 1 of 1, from 76 to 169: score 111.0, E = 6.2e-33
                   *->vrLNVGGkrFeTsksTLtrfkPdTlLgrllktdsheailrlcdfydd
                      vrLNVGG+ F T+++TL r  P ++L rl++    e+++  +d+++d
    KIAA0176    76    VRLNVGGTYFVTTRQTLGRE-PKSFLCRLCC---QEDPE--LDSDKD 116  

                   dtnEyFFDRsPkhFetILnfYRtGdGkLhrp.evcldsfleEleFyglde
                   +t++y +DR+P++F +ILn++R+  GkL  ++e+ ++ +leE+eFy++ +
    KIAA0176   117 ETGAYLIDRDPTYFGPILNYLRH--GKLIITkELAEEGVLEEAEFYNIAS 164  

                   laielC<-*
                   l + l    
    KIAA0176   165 L-VRLV    169  

PF02214.13.ls: domain 1 of 1, from 76 to 169: score 112.9, E = 8.5e-31
                   *->vrLNVGGkrFeTsksTLtrfkPdTlLgrllktdsheailrlcdfydd
                      vrLNVGG+ F T+++TL r  P ++L rl++    e+++  +d+++d
    KIAA0176    76    VRLNVGGTYFVTTRQTLGRE-PKSFLCRLCC---QEDPE--LDSDKD 116  

                   dtnEyFFDRsPkhFetILnfYRtGdGkLhrp.evcldsfleEleFyglde
                   +t++y +DR+P++F +ILn++R+  GkL  ++e+ ++ +leE+eFy++ +
    KIAA0176   117 ETGAYLIDRDPTYFGPILNYLRH--GKLIITkELAEEGVLEEAEFYNIAS 164  

                   laielC<-*
                   l + l    
    KIAA0176   165 L-VRLV    169  

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