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Gene Information ( LG4 )

AC148227.2

Location:

Init: 35248347 Term: 35251575
Direction: direct
MAP: PNG

Sequence retrieval links:

Translated sequence

Gene Products:

putative retroelement pol polyprotein //pseudo

Results of Blast2 searches (The best-hits are tabulated.):

database
(show all) Accession Score Iden
(%) Posi
(%) Definition

uniref100 UniRef100_Q04358 196 30.8 46.2 Potato DNA for copia-like transposable element [Solanum tuberosum]

LJGI BP033602 93.6 42.2 56.0

MTGI BG587170 75.9 26.3 44.8 similar to PIR|F86470|F8 probable retroelement polyprotein [imported] - Arabidopsis thaliana, partial (13%)

GMGI TC235104 91.3 30.0 41.5 weakly similar to UP|Q850H8 (Q850H8) Gag-pol polyprotein (Fragment), partial (28%)

ara_mips At2g13940 148 31.0 45.2 putative retroelement pol polyprotein

nr emb|CAA36615.1| 196 30.8 46.2 unnamed protein product [Solanum tuberosum] gi|421954|pir||S25786 hypothetical protein 3 - potato transposon Tst1

sprot POLX_TOBAC 58.5 24.7 39.5 (P10978) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]

database (show all)	Accession	Score	Iden (%)	Posi (%)	Definition
uniref100	UniRef100_Q04358	196	30.8	46.2	Potato DNA for copia-like transposable element [Solanum tuberosum]
LJGI	BP033602	93.6	42.2	56.0
MTGI	BG587170	75.9	26.3	44.8	similar to PIR\|F86470\|F8 probable retroelement polyprotein [imported] - Arabidopsis thaliana, partial (13%)
GMGI	TC235104	91.3	30.0	41.5	weakly similar to UP\|Q850H8 (Q850H8) Gag-pol polyprotein (Fragment), partial (28%)
ara_mips	At2g13940	148	31.0	45.2	putative retroelement pol polyprotein
nr	emb\|CAA36615.1\|	196	30.8	46.2	unnamed protein product [Solanum tuberosum] gi\|421954\|pir\|\|S25786 hypothetical protein 3 - potato transposon Tst1
sprot	POLX_TOBAC	58.5	24.7	39.5	(P10978) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]

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