KATNB1 ORF clone pFN21AE9695

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE9695

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Clone info.

Species

human

Clone Name

pFN21AE9695 Sequence (with vector) Restriction Map

Product ID

FHC07984

ORF Sequence

DNA sequence (1965 bp)
Protein sequence (655 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE9695

Symbol

KATNB1

Alias : KAT, LIS6

Description

katanin p80 (WD repeat containing) subunit B 1

Original Clone ID

oc99695

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1965 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 655 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10788.1 7.1e-137 100.0 KATNB1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 120 134 PR00320 G-protein beta WD-40 repeat IPR020472 162 176 PR00320 G-protein beta WD-40 repeat IPR020472 204 218 PR00320 G-protein beta WD-40 repeat HMMPfam IPR019781 14 49 PF00400 WD40 repeat IPR019781 54 91 PF00400 WD40 repeat IPR019781 96 133 PF00400 WD40 repeat IPR019781 139 175 PF00400 WD40 repeat IPR019781 182 217 PF00400 WD40 repeat IPR019781 226 253 PF00400 WD40 repeat HMMSmart IPR001680 9 49 SM00320 WD40 repeat IPR001680 52 91 SM00320 WD40 repeat IPR001680 94 133 SM00320 WD40 repeat IPR001680 136 175 SM00320 WD40 repeat IPR001680 178 217 SM00320 WD40 repeat IPR001680 220 258 SM00320 WD40 repeat ProfileScan IPR019782 16 58 PS50082 WD40 repeat 2 IPR017986 16 253 PS50294 WD40-repeat-containing domain IPR019782 59 100 PS50082 WD40 repeat 2 IPR019782 101 142 PS50082 WD40 repeat 2 IPR019782 143 184 PS50082 WD40 repeat 2 IPR019782 185 226 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016878353 655 602703,616212 100.0 100.0 NP_005877 655 602703,616212 100.0 100.0 XP_016878352 655 602703,616212 100.0 100.0 XP_006721186 658 602703,616212 99.5 100.0 XP_016878351 672 602703,616212 97.5 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE9695 Download

>KIEE9695  1965 bp
ATGGCCACCCCTGTGGTCACCAAGACAGCCTGGAAGTTGCAAGAGATCGTCGCGCATGCC
AGCAACGTGTCCTCACTGGTGCTGGGCAAAGCCTCCGGGCGGCTGCTGGCTACAGGCGGG
GATGACTGCCGCGTCAACCTGTGGTCCATCAACAAGCCCAACTGCATCATGAGCCTGACG
GGCCACACATCCCCAGTGGAGAGCGTCCGCCTCAACACCCCCGAGGAGCTCATCGTGGCC
GGCTCTCAGTCGGGCTCCATCCGTGTCTGGGACCTGGAAGCTGCCAAAATTCTTCGCACA
CTCATGGGACACAAAGCCAACATCTGCAGCCTGGATTTCCACCCGTACGGCGAGTTTGTA
GCCTCTGGTTCCCAGGACACAAACATCAAGCTCTGGGACATCAGGAGGAAAGGCTGTGTC
TTCCGATACAGGGGGCACAGCCAGGCCGTGCGGTGTCTCCGGTTCAGCCCCGATGGGAAG
TGGTTGGCGTCGGCCGCAGATGACCACACCGTGAAGCTCTGGGATCTCACTGCCGGCAAG
ATGATGTCTGAGTTCCCTGGTCACACGGGGCCTGTCAACGTGGTCGAGTTTCACCCCAAC
GAGTACCTCCTGGCCTCCGGCAGCTCTGACAGGACAATCCGCTTCTGGGACCTGGAGAAG
TTCCAGGTGGTGAGCTGCATCGAAGGGGAGCCTGGGCCCGTCAGGAGCGTCCTCTTCAAC
CCAGATGGCTGCTGCCTGTACAGCGGCTGCCAGGACTCACTGCGTGTCTACGGCTGGGAA
CCTGAGCGGTGCTTTGATGTGGTCCTCGTCAACTGGGGCAAGGTGGCCGACCTGGCCATC
TGCAATGACCAGTTGATAGGTGTGGCCTTCTCCCAGAGCAACGTCTCCTCCTACGTGGTG
GATCTGACGCGTGTCACCAGGACTGGCACGGTGGCCCGGGACCCTGTGCAGGACCACCGG
CCCCTGGCACAGCCACTGCCCAACCCCAGCGCCCCCCTCCGGCGCATCTATGAGCGGCCC
AGCACAACCTGCAGCAAGCCTCAGAGGGTGAAGCAGAACTCAGAGAGCGAGCGCCGCAGC
CCCAGCAGCGAGGATGACCGGGACGAGCGCGAGTCCCGCGCGGAGATCCAGAACGCCGAG
GACTACAACGAGATCTTCCAGCCCAAGAACAGCATCAGTCGGACGCCACCCCGGAGAAGT
GAGCCCTTCCCTGCACCCCCAGAGGACGACGCAGCCACAGCAAAGGAGGCAGCAAAGCCC
AGCCCTGCCATGGATGTGCAGTTCCCGGTGCCAAATCTGGAGGTCCTGCCCCGGCCCCCA
GTGGTTGCTTCCACACCTGCACCCAAGGCTGAGCCTGCCATCATCCCTGCCACCCGGAAC
GAGCCCATCGGGCTGAAGGCCTCCGACTTCCTGCCCGCCGTGAAGATCCCCCAGCAGGCC
GAGCTGGTGGACGAGGATGCCATGTCACAGATCCGCAAAGGCCACGACACCATGTGTGTG
GTGCTCACCAGCCGCCACAAGAACCTGGACACTGTGCGGGCTGTGTGGACCATGGGCGAC
ATCAAGACGTCGGTGGACTCCGCTGTGGCCATCAACGACCTGTCGGTGGTGGTGGACCTC
CTGAACATCGTCAACCAGAAAGCCTCCCTGTGGAAGCTGGACCTGTGCACCACCGTCCTG
CCACAGATTGAGAAGCTTCTGCAGAGCAAGTATGAGAGCTACGTCCAGACGGGCTGCACC
TCCCTGAAGCTGATCCTGCAGCGGTTTCTGCCCCTCATCACAGACATGCTGGCGGCCCCA
CCCTCTGTGGGTGTGGATATCAGCAGGGAGGAGAGGCTGCATAAGTGCCGGCTCTGCTAC
AAGCAGCTTAAGAGCATCAGCGGCCTGGTCAAGAGCAAGTCAGGCCTGAGCGGCCGCCAT
GGCAGTACCTTCCGCGAGCTGCACCTGCTCATGGCCAGTCTGGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE9695 Download

>KIEE9695  655 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVARDPVQDHRPLAQPLPNPSAPLRRIYERPSTTCSKPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDAATAKEAAKP
SPAMDVQFPVPNLEVLPRPPVVASTPAPKAEPAIIPATRNEPIGLKASDFLPAVKIPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAP
PSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLMASLD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE9695 Download

>pFN21AE9695  6670 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCACCCCTGTGGTCACCAAGACAGCCTGGAA
GTTGCAAGAGATCGTCGCGCATGCCAGCAACGTGTCCTCACTGGTGCTGGGCAAAGCCTC
CGGGCGGCTGCTGGCTACAGGCGGGGATGACTGCCGCGTCAACCTGTGGTCCATCAACAA
GCCCAACTGCATCATGAGCCTGACGGGCCACACATCCCCAGTGGAGAGCGTCCGCCTCAA
CACCCCCGAGGAGCTCATCGTGGCCGGCTCTCAGTCGGGCTCCATCCGTGTCTGGGACCT
GGAAGCTGCCAAAATTCTTCGCACACTCATGGGACACAAAGCCAACATCTGCAGCCTGGA
TTTCCACCCGTACGGCGAGTTTGTAGCCTCTGGTTCCCAGGACACAAACATCAAGCTCTG
GGACATCAGGAGGAAAGGCTGTGTCTTCCGATACAGGGGGCACAGCCAGGCCGTGCGGTG
TCTCCGGTTCAGCCCCGATGGGAAGTGGTTGGCGTCGGCCGCAGATGACCACACCGTGAA
GCTCTGGGATCTCACTGCCGGCAAGATGATGTCTGAGTTCCCTGGTCACACGGGGCCTGT
CAACGTGGTCGAGTTTCACCCCAACGAGTACCTCCTGGCCTCCGGCAGCTCTGACAGGAC
AATCCGCTTCTGGGACCTGGAGAAGTTCCAGGTGGTGAGCTGCATCGAAGGGGAGCCTGG
GCCCGTCAGGAGCGTCCTCTTCAACCCAGATGGCTGCTGCCTGTACAGCGGCTGCCAGGA
CTCACTGCGTGTCTACGGCTGGGAACCTGAGCGGTGCTTTGATGTGGTCCTCGTCAACTG
GGGCAAGGTGGCCGACCTGGCCATCTGCAATGACCAGTTGATAGGTGTGGCCTTCTCCCA
GAGCAACGTCTCCTCCTACGTGGTGGATCTGACGCGTGTCACCAGGACTGGCACGGTGGC
CCGGGACCCTGTGCAGGACCACCGGCCCCTGGCACAGCCACTGCCCAACCCCAGCGCCCC
CCTCCGGCGCATCTATGAGCGGCCCAGCACAACCTGCAGCAAGCCTCAGAGGGTGAAGCA
GAACTCAGAGAGCGAGCGCCGCAGCCCCAGCAGCGAGGATGACCGGGACGAGCGCGAGTC
CCGCGCGGAGATCCAGAACGCCGAGGACTACAACGAGATCTTCCAGCCCAAGAACAGCAT
CAGTCGGACGCCACCCCGGAGAAGTGAGCCCTTCCCTGCACCCCCAGAGGACGACGCAGC
CACAGCAAAGGAGGCAGCAAAGCCCAGCCCTGCCATGGATGTGCAGTTCCCGGTGCCAAA
TCTGGAGGTCCTGCCCCGGCCCCCAGTGGTTGCTTCCACACCTGCACCCAAGGCTGAGCC
TGCCATCATCCCTGCCACCCGGAACGAGCCCATCGGGCTGAAGGCCTCCGACTTCCTGCC
CGCCGTGAAGATCCCCCAGCAGGCCGAGCTGGTGGACGAGGATGCCATGTCACAGATCCG
CAAAGGCCACGACACCATGTGTGTGGTGCTCACCAGCCGCCACAAGAACCTGGACACTGT
GCGGGCTGTGTGGACCATGGGCGACATCAAGACGTCGGTGGACTCCGCTGTGGCCATCAA
CGACCTGTCGGTGGTGGTGGACCTCCTGAACATCGTCAACCAGAAAGCCTCCCTGTGGAA
GCTGGACCTGTGCACCACCGTCCTGCCACAGATTGAGAAGCTTCTGCAGAGCAAGTATGA
GAGCTACGTCCAGACGGGCTGCACCTCCCTGAAGCTGATCCTGCAGCGGTTTCTGCCCCT
CATCACAGACATGCTGGCGGCCCCACCCTCTGTGGGTGTGGATATCAGCAGGGAGGAGAG
GCTGCATAAGTGCCGGCTCTGCTACAAGCAGCTTAAGAGCATCAGCGGCCTGGTCAAGAG
CAAGTCAGGCCTGAGCGGCCGCCATGGCAGTACCTTCCGCGAGCTGCACCTGCTCATGGC
CAGTCTGGACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT