SGOL1 ORF clone pFN21AE9622

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE9622

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Clone info.

Species

human

Clone Name

pFN21AE9622 Sequence (with vector) Restriction Map

Product ID

FHC12615

ORF Sequence

DNA sequence (1683 bp)
Protein sequence (561 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE9622

Symbol

SGOL1

Description

shugoshin-like 1 (S. pombe), transcript variant Sgo1F

Original Clone ID

cp99622

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1683 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 561 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33716.1 1.9e-155 100.0 SGO1 CCDS46773.1 1.4e-143 99.0 SGO1 CCDS56243.1 7.9e-45 100.0 SGO1 CCDS46774.1 2e-44 51.0 SGO1 CCDS46771.1 2.2e-44 54.9 SGO1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011516 22 67 PF07558 Shugoshin IPR011515 472 496 PF07557 Shugoshin
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011531678 561 609168,616201 100.0 100.0 XP_011531679 561 609168,616201 100.0 100.0 XP_011531675 561 609168,616201 100.0 100.0 NP_001012410 561 609168,616201 100.0 100.0 NP_001186181 561 609168,616201 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE9622 Download

>KIEE9622  1683 bp
ATGGCCAAGGAAAGATGCCTGAAAAAGTCCTTTCAAGATAGTCTTGAAGACATAAAGAAG
CGAATGAAAGAGAAAAGGAATAAAAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTATA
GCTGCACCATGCCAAATAATCACCAACACTTCTACACTGCTGAAAAATTACCAAGACAAC
AACAAAATGTTAGTTTTAGCTTTGGAAAATGAAAAATCCAAAGTGAAAGAAGCCCAAGAT
ATCATCCTACAGCTGAGAAAAGAATGTTACTATCTCACATGTCAGCTATATGCATTGAAA
GGAAAACTTACATCACAACAAACAGTAGAACCTGCTCAGAACCAGGAAATATGTTCCTCT
GGAATGGACCCCAATAGTGATGACAGCTCCAGAAATTTATTTGTGAAGGATTTACCGCAA
ATTCCTCTTGAAGAAACTGAACTTCCAGGACAAGGAGAATCATTTCAAATAGAAGATCAG
ATACCTACTATTCCTCAAGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCT
ACTGATAATGTCTTACCTAGAACTGTATCTGTTCGTAGCAGTTTAAAGAAACATTGTAAC
AGTATATGTCAGTTTGATAGCTTGGATGATTTTGAAACCAGTCATTTGGCAGGGAAGTCT
TTTGAATTCGAAAGAGTTGGATTTTTAGACCCACTAGTAAACATGCACATACCTGAAAAT
GTACAACACAATGCTTGTCAATGGAGCAAGGACCAAGTTAACTTATCACCAAAGCTGATT
CAGCCAGGAACGTTTACTAAAACAAAAGAAGACATTTTAGAATCTAAATCTGAACAAACT
AAAAGTAAGCAAAGAGATACACAAGAAAGAAAAAGAGAAGAGAAAAGAAAAGCTAACAGG
AGAAAATCAAAACGTATGTCAAAATATAAAGAGAATAAAAGCGAAAATAAAAAAACTGTT
CCCCAAAAAAAAATGCACAAATCTGTCAGTTCCAATGATGCTTACAATTTTAATTTGGAA
GAGGGTGTTCATCTTACTCCTTTCCGACAAAAAGTGAGCAATGACTCTAATAGAGAAGAA
AACAACGAGTCTGAAGTGAGCCTCTGTGAATCAAGTGGTTCAGGAGATGATTCCGATGAC
CTCTATTTGCCCACTTGCAAGTACATTCAGAATCCCACGAGCAATTCAGATAGACCAGTC
ACCAGGCCTCTAGCTAAAAGAGCACTGAAATACACAGATGAAAAAGAGACGGAGGGTTCT
AAGCCAACAAAAACTCCTACCACTACACCACCTGAAACTCAGCAGTCACCTCATCTTAGC
CTGAAGGATATCACCAATGTCTCCTTGTATCCTGTTGTGAAAATCAGAAGACTTTCTCTT
TCTCCAAAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCTAAACGTAGGTGCACAGCC
AGCGTGAACTATAAGGAGCCCACCCTCGCTTCGAAACTGAGAAGAGGGGACCCTTTTACA
GATTTGTGTTTTTTGAATTCTCCTATTTTCAAGCAGAAAAAGGATTTGAGACGTTCTAAA
AAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGCAATTTTTATTTTATATTATGTTCGA
GAATTTGTTTCGAGATTCCCAGACTGTAGGAAATGTAAACTTGAAACCCACATCTGCTTG
AGG

ORF Protein

Cloned ORF protein sequence for pFN21AE9622 Download

>KIEE9622  561 aa
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS
TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN
VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR
RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE
NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS
KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA
SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVR
EFVSRFPDCRKCKLETHICLR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE9622 Download

>pFN21AE9622  6388 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCAAGGAAAGATGCCTGAAAAAGTCCTTTCA
AGATAGTCTTGAAGACATAAAGAAGCGAATGAAAGAGAAAAGGAATAAAAACTTGGCAGA
GATTGGCAAACGCAGGTCTTTTATAGCTGCACCATGCCAAATAATCACCAACACTTCTAC
ACTGCTGAAAAATTACCAAGACAACAACAAAATGTTAGTTTTAGCTTTGGAAAATGAAAA
ATCCAAAGTGAAAGAAGCCCAAGATATCATCCTACAGCTGAGAAAAGAATGTTACTATCT
CACATGTCAGCTATATGCATTGAAAGGAAAACTTACATCACAACAAACAGTAGAACCTGC
TCAGAACCAGGAAATATGTTCCTCTGGAATGGACCCCAATAGTGATGACAGCTCCAGAAA
TTTATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGAAACTGAACTTCCAGGACAAGG
AGAATCATTTCAAATAGAAGATCAGATACCTACTATTCCTCAAGACACACTGGGAGTTGA
TTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGTCTTACCTAGAACTGTATCTGTTCG
TAGCAGTTTAAAGAAACATTGTAACAGTATATGTCAGTTTGATAGCTTGGATGATTTTGA
AACCAGTCATTTGGCAGGGAAGTCTTTTGAATTCGAAAGAGTTGGATTTTTAGACCCACT
AGTAAACATGCACATACCTGAAAATGTACAACACAATGCTTGTCAATGGAGCAAGGACCA
AGTTAACTTATCACCAAAGCTGATTCAGCCAGGAACGTTTACTAAAACAAAAGAAGACAT
TTTAGAATCTAAATCTGAACAAACTAAAAGTAAGCAAAGAGATACACAAGAAAGAAAAAG
AGAAGAGAAAAGAAAAGCTAACAGGAGAAAATCAAAACGTATGTCAAAATATAAAGAGAA
TAAAAGCGAAAATAAAAAAACTGTTCCCCAAAAAAAAATGCACAAATCTGTCAGTTCCAA
TGATGCTTACAATTTTAATTTGGAAGAGGGTGTTCATCTTACTCCTTTCCGACAAAAAGT
GAGCAATGACTCTAATAGAGAAGAAAACAACGAGTCTGAAGTGAGCCTCTGTGAATCAAG
TGGTTCAGGAGATGATTCCGATGACCTCTATTTGCCCACTTGCAAGTACATTCAGAATCC
CACGAGCAATTCAGATAGACCAGTCACCAGGCCTCTAGCTAAAAGAGCACTGAAATACAC
AGATGAAAAAGAGACGGAGGGTTCTAAGCCAACAAAAACTCCTACCACTACACCACCTGA
AACTCAGCAGTCACCTCATCTTAGCCTGAAGGATATCACCAATGTCTCCTTGTATCCTGT
TGTGAAAATCAGAAGACTTTCTCTTTCTCCAAAAAAGAATAAAGCAAGCCCAGCAGTGGC
TCTGCCTAAACGTAGGTGCACAGCCAGCGTGAACTATAAGGAGCCCACCCTCGCTTCGAA
ACTGAGAAGAGGGGACCCTTTTACAGATTTGTGTTTTTTGAATTCTCCTATTTTCAAGCA
GAAAAAGGATTTGAGACGTTCTAAAAAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGC
AATTTTTATTTTATATTATGTTCGAGAATTTGTTTCGAGATTCCCAGACTGTAGGAAATG
TAAACTTGAAACCCACATCTGCTTGAGGGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT