PKD2L2 ORF clone pFN21AE5667

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5667

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Clone info.

Species

human

Clone Name

pFN21AE5667 Sequence (with vector) Restriction Map

Product ID

FHC14094

ORF Sequence

DNA sequence (1569 bp)
Protein sequence (523 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5667

Symbol

PKD2L2

Alias : TRPP5

Description

polycystic kidney disease 2-like 2, transcript variant 3

Original Clone ID

oc95667

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1569 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 523 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS58971.1 1.6e-198 99.8 PKD2L2 CCDS43367.1 1.4e-146 81.6 PKD2L2 CCDS78062.1 1.4e-146 81.6 PKD2L2 CCDS58972.1 1.4e-123 78.5 PKD2L2 CCDS3627.1 2.5e-66 45.0 PKD2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003915 45 66 PR01433 Polycystic kidney disease type 2 protein IPR003915 118 137 PR01433 Polycystic kidney disease type 2 protein IPR003915 230 252 PR01433 Polycystic kidney disease type 2 protein IPR003915 285 307 PR01433 Polycystic kidney disease type 2 protein IPR003915 316 336 PR01433 Polycystic kidney disease type 2 protein IPR003915 362 387 PR01433 Polycystic kidney disease type 2 protein HMMPfam IPR013122 76 382 PF08016 Polycystin cation channel
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 LYFIFLINLCILTFGMVNPHMYY 56 PRIMARY 23 2 241 NVNLFCIIRLVAEFPATGGILTS 263 SECONDARY 23 3 280 YFIASCEITFCIFLFVFTTQEV 301 PRIMARY 22 4 323 LLLLCFVAVSFNTYYNVQIFLLL 345 PRIMARY 23 5 363 CWHIYYNNIIAITIFFAWIKNMF 385 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001245378 523 604669 99.8 100.0 XP_016864832 604 604669 81.6 86.8 NP_055201 613 604669 81.6 86.8 NP_001287850 624 604669 81.6 86.8 NP_001245377 602 604669 78.5 91.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5667 Download

>KIEE5667  1569 bp
ATGGCTGAGGCGTCACGGTGGCACCGAGGCGGGGCTTCGAAACATAAGTTGCATTACAGA
AAGGAAGTAGAAATTACAACCACACTTCAGGAATTGTTACTCTACTTTATTTTTTTAATA
AACCTATGTATATTGACTTTTGGGATGGTAAACCCACATATGTATTACTTAAACAAGGTT
ATGTCATCTCTATTTTTGGACACTTCTGTGCCTGGTGAAGAAAGAACCAACTTTAAGTCC
ATTCGCAGCATAACTGATTTTTGGAAGTTTATGGAAGGACCCCTTTTGGAAGGTCTGTAC
TGGGATTCATGGTACAATAACCAGCAGCTGTATAATTTAAAGAACAGCAGTCGCATCTAC
TATGAAAATATACTTCTAGGAGTTCCCAGAGTTCGTCAACTAAAAGTCCGCAACAACACA
TGCAAAGTCTATTCATCTTTTCAGTCTTTGATGAGTGAATGTTATGGCAAATATACTTCT
GCAAATGAAGACCTCTCTAATTTTGGCCTTCAAATTAATACTGAATGGAGATATTCTACT
TCTAATACCAACTCCCCTTGGCACTGGGGATTTCTTGGTGTTTACCGAAATGGGGGATAC
ATTTTCACTTTATCAAAATCGAAATCTGAAACCAAAAACAAGTTCATTGACCTTCGACTG
AACAGCTGGATCACAAGAGGGACTAGAGTTATTTTTATTGATTTTTCCTTATATAATGCT
AATGTAAATCTATTTTGTATTATCAGATTGGTGGCAGAATTCCCTGCAACTGGAGGAATA
CTTACTTCATGGCAGTTTTACTCTGTGAAGCTCCTCAGATATGTTAGCTACTATGACTAT
TTTATTGCTTCCTGTGAAATCACATTCTGTATTTTTCTTTTTGTCTTCACAACACAAGAA
GTCAAAAAAATAAAAGAATTTAAGTCTGCCTATTTCAAAAGTATTTGGAACTGGCTAGAA
TTGCTACTTTTGCTGTTGTGTTTTGTGGCTGTTTCCTTCAACACATACTATAATGTACAA
ATTTTTCTCTTACTTGGACAGCTGTTGAAAAGTACTGAAAAATATTCAGATTTCTATTTT
CTTGCATGCTGGCACATTTATTACAATAATATAATTGCTATTACCATCTTTTTTGCATGG
ATAAAGAATATGTTCTTGGCAATTATTAATGATACCTATTCTGAAGTGAAAGCTGACTAT
TCAATAGGCAGAAGGCCAGATTTTGAACTTGGCAAAATGATTAAACAGAGTTACAAAAAT
GTTCTCGAGAAATTCAGACTGAAGAAAGCTCAAAAAGATGAAGACAAGAAAACCAAAGGC
AGCGGAGATTTGGCTGAACAAGCCAGAAGAGAAGGCTTTGACGAAAATGAGATTCAAAAC
GCAGAGCAGATGAAAAAATGGAAAGAGAGGCTTGAGAAAAAGTATTATTCTATGGAAATT
CAAGATGACTACCAGCCTGTCACTCAAGAAGAATTTCGAGAACTTTTTTTATATGCTGTG
GAGCTGGAGAAGGAATTACACTACATCAATTTGAAGCTAAATCAAGTGGTGAGAAAGGTT
TCAGCTCTA

ORF Protein

Cloned ORF protein sequence for pFN21AE5667 Download

>KIEE5667  523 aa
MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
LACWHIYYNNIIAITIFFAWIKNMFLAIINDTYSEVKADYSIGRRPDFELGKMIKQSYKN
VLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEI
QDDYQPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5667 Download

>pFN21AE5667  6274 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGAGGCGTCACGGTGGCACCGAGGCGGGGC
TTCGAAACATAAGTTGCATTACAGAAAGGAAGTAGAAATTACAACCACACTTCAGGAATT
GTTACTCTACTTTATTTTTTTAATAAACCTATGTATATTGACTTTTGGGATGGTAAACCC
ACATATGTATTACTTAAACAAGGTTATGTCATCTCTATTTTTGGACACTTCTGTGCCTGG
TGAAGAAAGAACCAACTTTAAGTCCATTCGCAGCATAACTGATTTTTGGAAGTTTATGGA
AGGACCCCTTTTGGAAGGTCTGTACTGGGATTCATGGTACAATAACCAGCAGCTGTATAA
TTTAAAGAACAGCAGTCGCATCTACTATGAAAATATACTTCTAGGAGTTCCCAGAGTTCG
TCAACTAAAAGTCCGCAACAACACATGCAAAGTCTATTCATCTTTTCAGTCTTTGATGAG
TGAATGTTATGGCAAATATACTTCTGCAAATGAAGACCTCTCTAATTTTGGCCTTCAAAT
TAATACTGAATGGAGATATTCTACTTCTAATACCAACTCCCCTTGGCACTGGGGATTTCT
TGGTGTTTACCGAAATGGGGGATACATTTTCACTTTATCAAAATCGAAATCTGAAACCAA
AAACAAGTTCATTGACCTTCGACTGAACAGCTGGATCACAAGAGGGACTAGAGTTATTTT
TATTGATTTTTCCTTATATAATGCTAATGTAAATCTATTTTGTATTATCAGATTGGTGGC
AGAATTCCCTGCAACTGGAGGAATACTTACTTCATGGCAGTTTTACTCTGTGAAGCTCCT
CAGATATGTTAGCTACTATGACTATTTTATTGCTTCCTGTGAAATCACATTCTGTATTTT
TCTTTTTGTCTTCACAACACAAGAAGTCAAAAAAATAAAAGAATTTAAGTCTGCCTATTT
CAAAAGTATTTGGAACTGGCTAGAATTGCTACTTTTGCTGTTGTGTTTTGTGGCTGTTTC
CTTCAACACATACTATAATGTACAAATTTTTCTCTTACTTGGACAGCTGTTGAAAAGTAC
TGAAAAATATTCAGATTTCTATTTTCTTGCATGCTGGCACATTTATTACAATAATATAAT
TGCTATTACCATCTTTTTTGCATGGATAAAGAATATGTTCTTGGCAATTATTAATGATAC
CTATTCTGAAGTGAAAGCTGACTATTCAATAGGCAGAAGGCCAGATTTTGAACTTGGCAA
AATGATTAAACAGAGTTACAAAAATGTTCTCGAGAAATTCAGACTGAAGAAAGCTCAAAA
AGATGAAGACAAGAAAACCAAAGGCAGCGGAGATTTGGCTGAACAAGCCAGAAGAGAAGG
CTTTGACGAAAATGAGATTCAAAACGCAGAGCAGATGAAAAAATGGAAAGAGAGGCTTGA
GAAAAAGTATTATTCTATGGAAATTCAAGATGACTACCAGCCTGTCACTCAAGAAGAATT
TCGAGAACTTTTTTTATATGCTGTGGAGCTGGAGAAGGAATTACACTACATCAATTTGAA
GCTAAATCAAGTGGTGAGAAAGGTTTCAGCTCTAGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT