SRSF11 ORF clone pFN21AE5657

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5657

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Clone info.

Species

human

Clone Name

pFN21AE5657 Sequence (with vector) Restriction Map

Product ID

FHC14291

ORF Sequence

DNA sequence (1449 bp)
Protein sequence (483 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5657

Symbol

SRSF11

Alias : NET2, SFRS11, dJ677H15.2, p54

Description

serine/arginine-rich splicing factor 11, transcript variant 2

Original Clone ID

oc95657

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1449 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 483 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53332.1 4e-83 100.0 SRSF11 CCDS647.1 8.8e-83 99.8 SRSF11 CCDS43323.1 5.5e-19 43.3 SREK1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 37 101 PF00076 RNA recognition motif domain HMMSmart IPR000504 34 108 SM00360 RNA recognition motif domain ProfileScan IPR000504 33 113 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016858302 483 602010 100.0 100.0 NP_001177916 483 602010 100.0 100.0 XP_016858301 484 602010 99.8 100.0 XP_011540729 484 602010 99.8 100.0 NP_004759 484 602010 99.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5657 Download

>KIEE5657  1449 bp
ATGAGCAACACTACCGTCGTCCCCAGCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGT
GGCGGAGGTGGTGGTGGCGGCGGAGGCGGCGGCACCGAGGTAATCCAGGTGACTAATGTC
TCCCCGAGCGCTAGCTCTGAGCAGATGCGGACTCTCTTCGGTTTCCTAGGCAAGATCGAC
GAACTGCGCCTCTTCCCGCCGGATGATTCGCCTTTGCCAGTCTCATCTCGTGTCTGCTTT
GTTAAGTTCCATGATCCAGACTCAGCAGTTGTGGCACAGCATCTGACAAACACTGTATTC
GTTGACAGAGCTTTGATAGTCGTACCATATGCAGAAGGAGTTATTCCTGATGAAGCTAAA
GCTTTGTCTCTGTTGGCACCAGCTAATGCAGTGGCAGGTCTTCTGCCTGGTGGTGGACTC
CTGCCTACTCCTAACCCACTTACCCAGATTGGCGCTGTTCCACTGGCTGCTTTGGGGGCT
CCTACTCTTGATCCTGCCCTTGCTGCACTTGGGCTTCCTGGAGCAAACTTGAACTCTCAG
TCTCTTGCTGCAGATCAGTTGCTGAAGCTTATGAGTACTGTTGATCCCAAGTTGAATCAT
GTAGCTGCTGGTCTCGTTTCACCAAGTCTGAAATCGGATACCTCTAGTAAAGAAATAGAG
GAAGCTATGAAAAGAGTACGAGAAGCACAGTCCCTAATTTCTGCTGCTATAGAACCAGAT
AAGAAAGAAGAAAAAAGAAGGCATTCAAGATCAAGATCACGTTCTAGGAGGAGGAGGACT
CCCTCATCTTCTAGACACAGGCGGTCAAGAAGCAGATCGAGACGGCGGTCACATTCTAAG
TCTAGGAGTCGGCGACGATCCAAAAGCCCAAGGCGGAGAAGATCTCATTCCAGAGAAAGA
GGTAGAAGGTCAAGGAGCACATCAAAAACAAGAGACAAAAAGAAAGAAGACAAAGAAAAG
AAACGTTCTAAAACACCACCAAAAAGTTACAGCACAGCCAGACGTTCTAGAAGTGCAAGC
AGAGAGAGACGACGACGAAGAAGCAGGAGTGGCACAAGATCTCCTAAAAAGCCTCGGTCT
CCTAAAAGAAAATTGTCCCGCTCACCATCCCCTAGGAGACATAAAAAGGAGAAGAAGAAA
GATAAAGACAAAGAAAGAAGTAGGGATGAAAGAGAACGATCAACAAGCAAGAAGAAGAAG
AGTAAAGATAAGGAAAAGGACCGGGAAAGAAAATCAGAGAGTGATAAAGATGTAAAAGTT
ACACGGGATTATGATGAAGAGGAACAGGGGTATGACAGTGAGAAAGAGAAAAAAGAAGAG
AAGAAACCAATAGAAACAGGTTCCCCTAAAACAAAGGAATGTTCTGTGGAAAAGGGAACT
GGTGATTCACTAAGAGAATCCAAAGTGAATGGGGATGATCATCATGAAGAAGACATGGAT
ATGAGTGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE5657 Download

>KIEE5657  483 aa
MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKV
TRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD
MSD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5657 Download

>pFN21AE5657  6154 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCAACACTACCGTCGTCCCCAGCACTGCAGG
TCCGGGCCCCAGCGGCGGGCCCGGTGGCGGAGGTGGTGGTGGCGGCGGAGGCGGCGGCAC
CGAGGTAATCCAGGTGACTAATGTCTCCCCGAGCGCTAGCTCTGAGCAGATGCGGACTCT
CTTCGGTTTCCTAGGCAAGATCGACGAACTGCGCCTCTTCCCGCCGGATGATTCGCCTTT
GCCAGTCTCATCTCGTGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGCAGTTGTGGC
ACAGCATCTGACAAACACTGTATTCGTTGACAGAGCTTTGATAGTCGTACCATATGCAGA
AGGAGTTATTCCTGATGAAGCTAAAGCTTTGTCTCTGTTGGCACCAGCTAATGCAGTGGC
AGGTCTTCTGCCTGGTGGTGGACTCCTGCCTACTCCTAACCCACTTACCCAGATTGGCGC
TGTTCCACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTTGCTGCACTTGGGCT
TCCTGGAGCAAACTTGAACTCTCAGTCTCTTGCTGCAGATCAGTTGCTGAAGCTTATGAG
TACTGTTGATCCCAAGTTGAATCATGTAGCTGCTGGTCTCGTTTCACCAAGTCTGAAATC
GGATACCTCTAGTAAAGAAATAGAGGAAGCTATGAAAAGAGTACGAGAAGCACAGTCCCT
AATTTCTGCTGCTATAGAACCAGATAAGAAAGAAGAAAAAAGAAGGCATTCAAGATCAAG
ATCACGTTCTAGGAGGAGGAGGACTCCCTCATCTTCTAGACACAGGCGGTCAAGAAGCAG
ATCGAGACGGCGGTCACATTCTAAGTCTAGGAGTCGGCGACGATCCAAAAGCCCAAGGCG
GAGAAGATCTCATTCCAGAGAAAGAGGTAGAAGGTCAAGGAGCACATCAAAAACAAGAGA
CAAAAAGAAAGAAGACAAAGAAAAGAAACGTTCTAAAACACCACCAAAAAGTTACAGCAC
AGCCAGACGTTCTAGAAGTGCAAGCAGAGAGAGACGACGACGAAGAAGCAGGAGTGGCAC
AAGATCTCCTAAAAAGCCTCGGTCTCCTAAAAGAAAATTGTCCCGCTCACCATCCCCTAG
GAGACATAAAAAGGAGAAGAAGAAAGATAAAGACAAAGAAAGAAGTAGGGATGAAAGAGA
ACGATCAACAAGCAAGAAGAAGAAGAGTAAAGATAAGGAAAAGGACCGGGAAAGAAAATC
AGAGAGTGATAAAGATGTAAAAGTTACACGGGATTATGATGAAGAGGAACAGGGGTATGA
CAGTGAGAAAGAGAAAAAAGAAGAGAAGAAACCAATAGAAACAGGTTCCCCTAAAACAAA
GGAATGTTCTGTGGAAAAGGGAACTGGTGATTCACTAAGAGAATCCAAAGTGAATGGGGA
TGATCATCATGAAGAAGACATGGATATGAGTGACGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT