ZSCAN20 ORF clone pFN21AE5567

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5567

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Clone info.

Species

human

Clone Name

pFN21AE5567 Sequence (with vector) Restriction Map

Product ID

FHC15514

ORF Sequence

DNA sequence (1299 bp)
Protein sequence (433 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5567

Symbol

ZSCAN20

Alias : KOX29, ZFP-31, ZNF31, ZNF360

Description

zinc finger and SCAN domain containing 20

Original Clone ID

oc95567

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1299 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 433 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41300.1 2.7e-80 87.3 ZSCAN20 CCDS66921.1 6.5e-42 39.7 ZSCAN32 CCDS10095.2 9.1e-35 46.7 ZSCAN29 CCDS10495.1 9.2e-26 37.0 ZNF213 CCDS32410.1 2.3e-24 38.4 ZKSCAN2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 47 138 PF02023 Transcription regulator SCAN HMMSmart IPR003309 47 160 SM00431 Transcription regulator SCAN ProfileScan IPR003309 51 132 PS50804 Transcription regulator SCAN
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006710939 989 611315 98.8 99.8 XP_005271228 1042 611315 87.5 94.7 XP_016857727 1042 611315 87.5 94.7 NP_660281 1043 611315 87.5 94.7 XP_016857726 1043 611315 87.3 94.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5567 Download

>KIEE5567  1299 bp
ATGGCTATGGCCCTGGAATTGCAAGCCCAGGCATCTCCGCAGCCAGAGCCTGAAGAACTC
CTGATTGTGAAACTGGAAGAGGACTCTTGGGGATCAGAATCCAAACTCTGGGAGAAGGAC
CGTGGCTCTGTCTCTGGCCCAGAGGCCTCCCGCCAGCGCTTCAGGCAATTCCAATACAGG
GATGCAGCTGGACCCCACGAGGCCTTCAGCCAGCTCTGGGCTCTCTGCTGTCGTTGGCTG
AGGCCGGAGATCCGTCTCAAAGAGCAGATCCTGGAGCTGCTCGTGCTGGAGCAGTTCCTG
ACTATCTTGCCTAGGGAGGTCCAGACCTGGGTGCAGGCACGCCACCCTGAGAGTGGTGAG
GAGGCTGTGGCCTTGGTGGAGGATTGGCACCGAGAGACCAGGACTGCAGGACAGTCGGGA
CTGGAATTGCATACAGAAGAGACCAGGCCCTTAAAGACAGGGGAAGAAGCTCAGAGCTTC
CAGCTGCAGCCAGTGGATCCCTGGCCTGAGGGACAGTCCCAGAAGAAGGGGGTGAAGAAT
ACATGCCCTGACCTTCCCAATCACCTAAATGCCGAGGTGGCACCACAGCCTTTGAAAGAG
AGTGGAGTTCCAGTTTCAAAACCAAGTAATACCTCCGAGAAAGAGCAAGGACCAGAGTTT
TGGGGTCTAAGTCTTATAAATTCTGGGAAAAGGAGCACTGCAGATTACAGCCTGGATAAT
GAGCCAGCTCAGGCATTGACCTGGAGGGATTCAAGAGCCTGGGAGGAACAATACCAGTGG
GATGTGGAGGACATGAAGGTGTCAGGTGTTCACTGGGGCTATGAGGAGACCAAGACTTTC
CTGGCAATTTTGAGTGAATCTCCTTTCTCTGAAAAGCTCCGGACTTGTCACCAGAACCGC
CAGGTATATCGGGCCATTGCAGAGCAGCTAAGGGCAAGGGGCTTCCTGCGGACACTGGAG
CAATGTCGCTATAGGGTCAAAAACCTCCTACGGAATTACCGGAAAGCCAAGAGCAGCCAC
CCACCAGGTACCTGCCCCTTCTATGAGGAGCTGGAGGCCCTGGTCAGGGCTCGGACAGCC
ATCAGAGCCACAGATGGCCCAGGAGAGGCCGTGGCACTTCCCAGGCTCGGGGATAGTGAC
GCAGAGATGGATGAGCAGGAGGAAGGGGGCTGGGATCCTGAAGAAATGGCAGAAGACTGT
AACGGTGCTGGCCTGGTCAATGTTGAGTCTACCCAGGGGCCCAGGATTGCAGGGGCCCCA
GCTCTGTTCCAGAGTCGTATTGGTAAGAACATGGGGGTT

ORF Protein

Cloned ORF protein sequence for pFN21AE5567 Download

>KIEE5567  433 aa
MAMALELQAQASPQPEPEELLIVKLEEDSWGSESKLWEKDRGSVSGPEASRQRFRQFQYR
DAAGPHEAFSQLWALCCRWLRPEIRLKEQILELLVLEQFLTILPREVQTWVQARHPESGE
EAVALVEDWHRETRTAGQSGLELHTEETRPLKTGEEAQSFQLQPVDPWPEGQSQKKGVKN
TCPDLPNHLNAEVAPQPLKESGVPVSKPSNTSEKEQGPEFWGLSLINSGKRSTADYSLDN
EPAQALTWRDSRAWEEQYQWDVEDMKVSGVHWGYEETKTFLAILSESPFSEKLRTCHQNR
QVYRAIAEQLRARGFLRTLEQCRYRVKNLLRNYRKAKSSHPPGTCPFYEELEALVRARTA
IRATDGPGEAVALPRLGDSDAEMDEQEEGGWDPEEMAEDCNGAGLVNVESTQGPRIAGAP
ALFQSRIGKNMGV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5567 Download

>pFN21AE5567  6004 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTATGGCCCTGGAATTGCAAGCCCAGGCATC
TCCGCAGCCAGAGCCTGAAGAACTCCTGATTGTGAAACTGGAAGAGGACTCTTGGGGATC
AGAATCCAAACTCTGGGAGAAGGACCGTGGCTCTGTCTCTGGCCCAGAGGCCTCCCGCCA
GCGCTTCAGGCAATTCCAATACAGGGATGCAGCTGGACCCCACGAGGCCTTCAGCCAGCT
CTGGGCTCTCTGCTGTCGTTGGCTGAGGCCGGAGATCCGTCTCAAAGAGCAGATCCTGGA
GCTGCTCGTGCTGGAGCAGTTCCTGACTATCTTGCCTAGGGAGGTCCAGACCTGGGTGCA
GGCACGCCACCCTGAGAGTGGTGAGGAGGCTGTGGCCTTGGTGGAGGATTGGCACCGAGA
GACCAGGACTGCAGGACAGTCGGGACTGGAATTGCATACAGAAGAGACCAGGCCCTTAAA
GACAGGGGAAGAAGCTCAGAGCTTCCAGCTGCAGCCAGTGGATCCCTGGCCTGAGGGACA
GTCCCAGAAGAAGGGGGTGAAGAATACATGCCCTGACCTTCCCAATCACCTAAATGCCGA
GGTGGCACCACAGCCTTTGAAAGAGAGTGGAGTTCCAGTTTCAAAACCAAGTAATACCTC
CGAGAAAGAGCAAGGACCAGAGTTTTGGGGTCTAAGTCTTATAAATTCTGGGAAAAGGAG
CACTGCAGATTACAGCCTGGATAATGAGCCAGCTCAGGCATTGACCTGGAGGGATTCAAG
AGCCTGGGAGGAACAATACCAGTGGGATGTGGAGGACATGAAGGTGTCAGGTGTTCACTG
GGGCTATGAGGAGACCAAGACTTTCCTGGCAATTTTGAGTGAATCTCCTTTCTCTGAAAA
GCTCCGGACTTGTCACCAGAACCGCCAGGTATATCGGGCCATTGCAGAGCAGCTAAGGGC
AAGGGGCTTCCTGCGGACACTGGAGCAATGTCGCTATAGGGTCAAAAACCTCCTACGGAA
TTACCGGAAAGCCAAGAGCAGCCACCCACCAGGTACCTGCCCCTTCTATGAGGAGCTGGA
GGCCCTGGTCAGGGCTCGGACAGCCATCAGAGCCACAGATGGCCCAGGAGAGGCCGTGGC
ACTTCCCAGGCTCGGGGATAGTGACGCAGAGATGGATGAGCAGGAGGAAGGGGGCTGGGA
TCCTGAAGAAATGGCAGAAGACTGTAACGGTGCTGGCCTGGTCAATGTTGAGTCTACCCA
GGGGCCCAGGATTGCAGGGGCCCCAGCTCTGTTCCAGAGTCGTATTGGTAAGAACATGGG
GGTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT