ZNF138 ORF clone pFN21AE3408

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Halotag ORF Clone pFN21AE3408

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Clone info.

Species

human

Clone Name

pFN21AE3408 Sequence (with vector) Restriction Map

Product ID

FHC11129

ORF Sequence

DNA sequence (879 bp)
Protein sequence (293 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3408

Symbol

ZNF138

Alias : pHZ-32

Description

zinc finger protein 138, transcript variant 1

Original Clone ID

cp93408

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 879 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 293 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34645.2 4.3e-59 99.7 ZNF138 CCDS64661.1 9e-58 99.7 ZNF138 CCDS64660.1 2e-50 91.5 ZNF138 CCDS75606.1 7.6e-43 75.3 ZNF107 CCDS75608.1 1.5e-42 75.2 ZNF92 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 4 43 PF01352 Krueppel-associated box IPR007087 225 247 PF00096 Zinc finger IPR007087 253 272 PF00096 Zinc finger HMMSmart IPR001909 4 63 SM00349 Krueppel-associated box IPR015880 141 163 SM00355 Zinc finger IPR015880 169 191 SM00355 Zinc finger IPR015880 197 217 SM00355 Zinc finger IPR015880 225 247 SM00355 Zinc finger IPR015880 253 273 SM00355 Zinc finger ProfileScan IPR001909 4 78 PS50805 Krueppel-associated box IPR007087 141 168 PS50157 Zinc finger IPR007087 169 196 PS50157 Zinc finger IPR007087 197 224 PS50157 Zinc finger IPR007087 225 252 PS50157 Zinc finger IPR007087 253 280 PS50157 Zinc finger IPR007087 281 293 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006515 293 604080 100.0 100.0 NP_001258567 287 604080 100.0 98.0 NP_001258568 319 604080 91.8 100.0 NP_001269289 820 603989 75.3 99.7 NP_001274461 554 603974 75.2 99.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3408 Download

>KIEE3408  879 bp
ATGGGACCACTGACATTTATGGATGTGGCCATAGAGTTCTCTTTGGAGGAGTGGCAGTGC
CTGGACACTGCACAGCGGAATGTATATAGGCATGTGATGTTAGAGAACTACAGAAACCTG
GTTTTCTTGGCTCTGTGTTCTCGTTTTGCCCAAGACCTTTGGCTAGAGCAGAACATAAAA
GATTCTTTCCAAAAAGTGACACTGAGCAGATATGGAAAATATGGACATAAGAATTTACAG
TTAAGAAAAGGCTGTAAAAGTGTGGATGAGTGTAAGGGACACCAAGGAGGTTATAATGGA
CTTAACCAATGTTTGAAAATTACCACAAGCAAAATATTTCAATGTAATAAATATGTAAAA
GTCATGCATAAATTTTCAAATTCAAATAGACACAAGATAAGACATACTGAAAATAAACAT
TTCAGATGTAAAGAATGTGACAAATCACTTTGCATGCTTTCACGCCTAACTCAACATAAA
AAAATTCATACTAGAGAGAATTTCTACAAATGTGAAGAGTGTGGAAAAACCTTTAACTGG
TCCACAAACCTTTCTAAACCTAAGAAAATTCATACTGGAGAAAAACCCTACAAATGTGAA
GTATGTGGAAAAGCCTTTCACCAATCCTCAATCCTTACTAAACATAAGATAATTCGTACT
GGAGAAAAACCCTATAAATGTGCACACTGTGGCAAAGCCTTTAAACAGTCCTCACACCTT
ACTAGACATAAGATAATTCATACTGAAGAGAAACCCTACAAATGTGAACAATGTGGCAAG
GTCTTTAAGCAGTCCCCAACCCTTACTAAACATCAGATAATTTATACTGGAGAGGAACCA
TACAAATGTGAGGAATGTGGCAAAGCTTTTAACCTATCT

ORF Protein

Cloned ORF protein sequence for pFN21AE3408 Download

>KIEE3408  293 aa
MGPLTFMDVAIEFSLEEWQCLDTAQRNVYRHVMLENYRNLVFLALCSRFAQDLWLEQNIK
DSFQKVTLSRYGKYGHKNLQLRKGCKSVDECKGHQGGYNGLNQCLKITTSKIFQCNKYVK
VMHKFSNSNRHKIRHTENKHFRCKECDKSLCMLSRLTQHKKIHTRENFYKCEECGKTFNW
STNLSKPKKIHTGEKPYKCEVCGKAFHQSSILTKHKIIRTGEKPYKCAHCGKAFKQSSHL
TRHKIIHTEEKPYKCEQCGKVFKQSPTLTKHQIIYTGEEPYKCEECGKAFNLS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3408 Download

>pFN21AE3408  5584 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGACCACTGACATTTATGGATGTGGCCATAGA
GTTCTCTTTGGAGGAGTGGCAGTGCCTGGACACTGCACAGCGGAATGTATATAGGCATGT
GATGTTAGAGAACTACAGAAACCTGGTTTTCTTGGCTCTGTGTTCTCGTTTTGCCCAAGA
CCTTTGGCTAGAGCAGAACATAAAAGATTCTTTCCAAAAAGTGACACTGAGCAGATATGG
AAAATATGGACATAAGAATTTACAGTTAAGAAAAGGCTGTAAAAGTGTGGATGAGTGTAA
GGGACACCAAGGAGGTTATAATGGACTTAACCAATGTTTGAAAATTACCACAAGCAAAAT
ATTTCAATGTAATAAATATGTAAAAGTCATGCATAAATTTTCAAATTCAAATAGACACAA
GATAAGACATACTGAAAATAAACATTTCAGATGTAAAGAATGTGACAAATCACTTTGCAT
GCTTTCACGCCTAACTCAACATAAAAAAATTCATACTAGAGAGAATTTCTACAAATGTGA
AGAGTGTGGAAAAACCTTTAACTGGTCCACAAACCTTTCTAAACCTAAGAAAATTCATAC
TGGAGAAAAACCCTACAAATGTGAAGTATGTGGAAAAGCCTTTCACCAATCCTCAATCCT
TACTAAACATAAGATAATTCGTACTGGAGAAAAACCCTATAAATGTGCACACTGTGGCAA
AGCCTTTAAACAGTCCTCACACCTTACTAGACATAAGATAATTCATACTGAAGAGAAACC
CTACAAATGTGAACAATGTGGCAAGGTCTTTAAGCAGTCCCCAACCCTTACTAAACATCA
GATAATTTATACTGGAGAGGAACCATACAAATGTGAGGAATGTGGCAAAGCTTTTAACCT
ATCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT