TRMT10C ORF clone pFN21AE3172

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3172

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Clone info.

Species

human

Clone Name

pFN21AE3172 Sequence (with vector) Restriction Map

Product ID

FHC07647

ORF Sequence

DNA sequence (1209 bp)
Protein sequence (403 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3172

Symbol

TRMT10C

Alias : COXPD30, HNYA, MRPP1, RG9MTD1

Description

tRNA methyltransferase 10 homolog C (S. cerevisiae)

Original Clone ID

cp93172

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1209 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 403 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43122.1 1.8e-148 100.0 TRMT10C CCDS43804.1 4.9e-13 28.7 TRMT10B CCDS69601.1 1.4e-12 31.1 TRMT10B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR016009 214 380 PF01746 tRNA (guanine-N1-)-methyltransferase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060289 403 615423,616974 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3172 Download

>KIEE3172  1209 bp
ATGGCTGCTTTCCTCAAAATGAGTGTTAGTGTCAATTTCTTCAGACCTTTCACCAGGTTT
TTGGTGCCATTTACCCTTCATAGGAAGAGAAATAACTTAACAATTTTGCAGAGATACATG
TCTTCCAAAATACCAGCTGTTACTTATCCTAAAAATGAGAGTACACCCCCTTCTGAAGAG
CTAGAGTTGGATAAGTGGAAAACTACCATGAAATCTAGTGTGCAAGAAGAATGTGTTTCA
ACAATCTCAAGCAGTAAGGATGAAGATCCTCTAGCTGCCACCAGAGAGTTCATTGAGATG
TGGAGATTGCTTGGCAGAGAAGTACCAGAACACATCACTGAAGAAGAGCTCAAAACCCTT
ATGGAATGTGTTTCTAACACAGCAAAAAAAAAATATTTAAAATATTTATATACGAAGGAA
AAAGTGAAAAAAGCTAGGCAAATAAAAAAGGAAATGAAAGCAGCAGCAAGGGAAGAAGCA
AAAAATATCAAGCTGCTAGAAACCACTGAGGAAGATAAACAGAAAAACTTTCTATTTTTA
CGACTTTGGGATAGGAATATGGACATAGCAATGGGCTGGAAGGGTGCCCAGGCCATGCAG
TTTGGACAACCTTTGGTTTTTGACATGGCTTACGAAAATTATATGAAACGAAAAGAATTG
CAGAATACTGTTTCCCAGCTTTTAGAAAGTGAAGGATGGAACAGAAGAAATGTTGATCCT
TTCCATATTTATTTCTGCAATCTAAAAATAGATGGTGCTTTGCACAGAGAGTTAGTTAAA
CGGTATCAAGAAAAATGGGACAAATTGCTTTTAACATCAACAGAAAAGTCTCATGTAGAT
TTATTTCCAAAGGACAGTATTATCTATTTAACTGCAGATTCTCCCAATGTTATGACTACT
TTCAGGCATGACAAAGTTTATGTAATTGGGTCTTTTGTTGATAAGAGTATGCAGCCAGGC
ACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTCCATTAGATAAA
TATTTACAATGGGAAATTGGTAACAAAAATCTCACCTTAGATCAAATGATACGTATTTTG
TTATGTCTGAAAAACAATGGTAATTGGCAAGAGGCTCTGCAATTCGTTCCCAAGAGAAAA
CATACTGGTTTTCTGGAGATTTCTCAGCATTCTCAAGAGTTTATCAACAGACTAAAGAAG
GCAAAGACT

ORF Protein

Cloned ORF protein sequence for pFN21AE3172 Download

>KIEE3172  403 aa
MAAFLKMSVSVNFFRPFTRFLVPFTLHRKRNNLTILQRYMSSKIPAVTYPKNESTPPSEE
LELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELKTL
MECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFL
RLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDP
FHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHVDLFPKDSIIYLTADSPNVMTT
FRHDKVYVIGSFVDKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRIL
LCLKNNGNWQEALQFVPKRKHTGFLEISQHSQEFINRLKKAKT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3172 Download

>pFN21AE3172  5914 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGCTTTCCTCAAAATGAGTGTTAGTGTCAA
TTTCTTCAGACCTTTCACCAGGTTTTTGGTGCCATTTACCCTTCATAGGAAGAGAAATAA
CTTAACAATTTTGCAGAGATACATGTCTTCCAAAATACCAGCTGTTACTTATCCTAAAAA
TGAGAGTACACCCCCTTCTGAAGAGCTAGAGTTGGATAAGTGGAAAACTACCATGAAATC
TAGTGTGCAAGAAGAATGTGTTTCAACAATCTCAAGCAGTAAGGATGAAGATCCTCTAGC
TGCCACCAGAGAGTTCATTGAGATGTGGAGATTGCTTGGCAGAGAAGTACCAGAACACAT
CACTGAAGAAGAGCTCAAAACCCTTATGGAATGTGTTTCTAACACAGCAAAAAAAAAATA
TTTAAAATATTTATATACGAAGGAAAAAGTGAAAAAAGCTAGGCAAATAAAAAAGGAAAT
GAAAGCAGCAGCAAGGGAAGAAGCAAAAAATATCAAGCTGCTAGAAACCACTGAGGAAGA
TAAACAGAAAAACTTTCTATTTTTACGACTTTGGGATAGGAATATGGACATAGCAATGGG
CTGGAAGGGTGCCCAGGCCATGCAGTTTGGACAACCTTTGGTTTTTGACATGGCTTACGA
AAATTATATGAAACGAAAAGAATTGCAGAATACTGTTTCCCAGCTTTTAGAAAGTGAAGG
ATGGAACAGAAGAAATGTTGATCCTTTCCATATTTATTTCTGCAATCTAAAAATAGATGG
TGCTTTGCACAGAGAGTTAGTTAAACGGTATCAAGAAAAATGGGACAAATTGCTTTTAAC
ATCAACAGAAAAGTCTCATGTAGATTTATTTCCAAAGGACAGTATTATCTATTTAACTGC
AGATTCTCCCAATGTTATGACTACTTTCAGGCATGACAAAGTTTATGTAATTGGGTCTTT
TGTTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGC
AACTGAATGCCTTCCATTAGATAAATATTTACAATGGGAAATTGGTAACAAAAATCTCAC
CTTAGATCAAATGATACGTATTTTGTTATGTCTGAAAAACAATGGTAATTGGCAAGAGGC
TCTGCAATTCGTTCCCAAGAGAAAACATACTGGTTTTCTGGAGATTTCTCAGCATTCTCA
AGAGTTTATCAACAGACTAAAGAAGGCAAAGACTGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT