TCEANC ORF clone pFN21AE3163

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Halotag ORF Clone pFN21AE3163

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Clone info.

Species

human

Clone Name

pFN21AE3163 Sequence (with vector) Restriction Map

Product ID

FHC31287

ORF Sequence

DNA sequence (1143 bp)
Protein sequence (381 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3163

Symbol

TCEANC

Description

transcription elongation factor A (SII) N-terminal and central domain containing, transcript variant 1

Original Clone ID

cp93163

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1143 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 381 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS48081.1 1.1e-144 100.0 TCEANC CCDS75954.1 2.3e-133 100.0 TCEANC CCDS44086.1 2e-13 29.4 TCEA3 CCDS47857.1 3.7e-13 29.4 TCEA1 CCDS47858.1 9e-13 27.9 TCEA1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR017923 59 108 PF08711 Transcription factor IIS IPR003618 201 311 PF07500 Transcription elongation factor S-II HMMSmart IPR017890 201 302 SM00510 Transcription elongation factor S-IIM ProfileScan IPR017923 35 112 PS51319 Transcription factor IIS IPR003618 203 319 PS51321 Transcription elongation factor S-II
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016857692 450 604128 31.0 80.8 XP_016857690 466 604128 30.1 85.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3163 Download

>KIEE3163  1143 bp
ATGATCTCGGCTCACCGCAAACTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCGGCC
TTCCGAGTAGCTGGGACTACAGCTGTAAAGATGTCTGACAAGAACCAGATAGCTGCCAGA
GCTTCTCTTATTGAGCAACTGATGTCCAAAAGGAATTTTGAGGATCTTGGCAACCACCTT
ACTGAGCTAGAAACAATTTATGTGACTAAGGAGCATCTCCAGGAGACAGATGTGGTCAGA
GCTGTGTACAGAGTCCTCAAAAACTGCCCCTCTGTGGCTTTGAAAAAGAAAGCCAAGTGT
TTGCTATCAAAGTGGAAAGCTGTTTATAAGCAGACTCACTCCAAAGCGAGGAACAGCCCT
AAATTATTTCCTGTGAGGGGTAATAAAGAAGAAAATTCAGGACCTTCTCATGACCCAAGT
CAGAATGAGACACTGGGCATCTGCAGCTCGAATTCTCTGTCTTCCCAAGACGTTGCAAAA
CTCAGTGAAATGATTGTGCCTGAAAATAGAGCCATTCAATTGAAACCTAAGGAAGAGCAT
TTTGGGGATGGTGACCCTGAATCCACTGGCAAGAGATCGAGTGAGTTGCTGGATCCCACA
ACACCCATGAGAACTAAATGCATAGAGCTTCTTTACGCAGCTTTAACTAGTTCTTCCACA
GATCAACCCAAAGCTGATTTGTGGCAAAACTTTGCAAGAGAAATTGAAGAGCATGTTTTT
ACCCTTTATTCAAAGAACATCAAAAAATATAAAACTTGCATCAGAAGCAAAGTTGCCAAT
TTGAAGAACCCCAGAAATTCTCATTTACAACAAAACTTGCTCTCTGGGACCACGTCTCCA
CGAGAATTTGCTGAAATGACTGTCATGGAGATGGCAAATAAGGAACTGAAGCAGTTGAGA
GCCTCCTACACGGAATCTTGTATCCAGGAACATTACCTTCCCCAAGTAATTGATGGCACA
CAGACAAATAAAATAAAATGCAGACGCTGTGAGAAATACAATTGCAAAGTCACTGTAATT
GACAGAGGAACACTTTTCCTTCCCAGCTGGGTGCGGAATTCAAACCCAGATGAACAAATG
ATGACTTACGTAATTTGTAACGAATGTGGGGAGCAGTGGTACCATAGCAAGTGGGTGTGC
TGG

ORF Protein

Cloned ORF protein sequence for pFN21AE3163 Download

>KIEE3163  381 aa
MISAHRKLCLPGSSNSPASAFRVAGTTAVKMSDKNQIAARASLIEQLMSKRNFEDLGNHL
TELETIYVTKEHLQETDVVRAVYRVLKNCPSVALKKKAKCLLSKWKAVYKQTHSKARNSP
KLFPVRGNKEENSGPSHDPSQNETLGICSSNSLSSQDVAKLSEMIVPENRAIQLKPKEEH
FGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIEEHVF
TLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELKQLR
ASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQM
MTYVICNECGEQWYHSKWVCW

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3163 Download

>pFN21AE3163  5848 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATCTCGGCTCACCGCAAACTCTGCCTCCCGGG
TTCAAGCAATTCTCCTGCCTCGGCCTTCCGAGTAGCTGGGACTACAGCTGTAAAGATGTC
TGACAAGAACCAGATAGCTGCCAGAGCTTCTCTTATTGAGCAACTGATGTCCAAAAGGAA
TTTTGAGGATCTTGGCAACCACCTTACTGAGCTAGAAACAATTTATGTGACTAAGGAGCA
TCTCCAGGAGACAGATGTGGTCAGAGCTGTGTACAGAGTCCTCAAAAACTGCCCCTCTGT
GGCTTTGAAAAAGAAAGCCAAGTGTTTGCTATCAAAGTGGAAAGCTGTTTATAAGCAGAC
TCACTCCAAAGCGAGGAACAGCCCTAAATTATTTCCTGTGAGGGGTAATAAAGAAGAAAA
TTCAGGACCTTCTCATGACCCAAGTCAGAATGAGACACTGGGCATCTGCAGCTCGAATTC
TCTGTCTTCCCAAGACGTTGCAAAACTCAGTGAAATGATTGTGCCTGAAAATAGAGCCAT
TCAATTGAAACCTAAGGAAGAGCATTTTGGGGATGGTGACCCTGAATCCACTGGCAAGAG
ATCGAGTGAGTTGCTGGATCCCACAACACCCATGAGAACTAAATGCATAGAGCTTCTTTA
CGCAGCTTTAACTAGTTCTTCCACAGATCAACCCAAAGCTGATTTGTGGCAAAACTTTGC
AAGAGAAATTGAAGAGCATGTTTTTACCCTTTATTCAAAGAACATCAAAAAATATAAAAC
TTGCATCAGAAGCAAAGTTGCCAATTTGAAGAACCCCAGAAATTCTCATTTACAACAAAA
CTTGCTCTCTGGGACCACGTCTCCACGAGAATTTGCTGAAATGACTGTCATGGAGATGGC
AAATAAGGAACTGAAGCAGTTGAGAGCCTCCTACACGGAATCTTGTATCCAGGAACATTA
CCTTCCCCAAGTAATTGATGGCACACAGACAAATAAAATAAAATGCAGACGCTGTGAGAA
ATACAATTGCAAAGTCACTGTAATTGACAGAGGAACACTTTTCCTTCCCAGCTGGGTGCG
GAATTCAAACCCAGATGAACAAATGATGACTTACGTAATTTGTAACGAATGTGGGGAGCA
GTGGTACCATAGCAAGTGGGTGTGCTGGGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT