SDR9C7 ORF clone pFN21AE2734

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Halotag ORF Clone pFN21AE2734

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Clone info.

Species

human

Clone Name

pFN21AE2734 Sequence (with vector) Restriction Map

Product ID

FHC24776

ORF Sequence

DNA sequence (939 bp)
Protein sequence (313 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE2734

Symbol

SDR9C7

Alias : ARCI13, RDHS, SDR-O, SDRO

Description

short chain dehydrogenase/reductase family 9C, member 7

Original Clone ID

oc01733

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Features of the cloned ORF sequence

Description

Length: 939 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 313 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8926.1 1.5e-135 100.0 SDR9C7 CCDS41797.1 5.6e-71 51.8 RDH16 CCDS8925.1 2.4e-69 50.8 HSD17B6 CCDS31829.1 1.4e-62 51.2 RDH5 CCDS2231.1 3.5e-58 46.8 DHRS9 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR002347 27 44 PR00081 Glucose/ribitol dehydrogenase IPR002347 100 111 PR00081 Glucose/ribitol dehydrogenase IPR002198 100 111 PR00080 Short-chain dehydrogenase/reductase SDR IPR002347 147 163 PR00081 Glucose/ribitol dehydrogenase IPR002198 153 161 PR00080 Short-chain dehydrogenase/reductase SDR IPR002347 172 191 PR00081 Glucose/ribitol dehydrogenase IPR002198 172 191 PR00080 Short-chain dehydrogenase/reductase SDR IPR002347 193 210 PR00081 Glucose/ribitol dehydrogenase HMMPfam IPR002198 27 190 PF00106 Short-chain dehydrogenase/reductase SDR
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_683695 313 609769,617574 100.0 100.0 XP_006719735 317 606623 50.8 100.0 XP_005269266 317 606623 50.8 100.0 XP_011537227 317 606623 50.8 100.0 XP_005269265 317 606623 50.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE2734 Download

>KIEE2734  939 bp
ATGGCGGCCCTCACAGACCTCTCATTTATGTATCGCTGGTTCAAGAACTGCAATCTGGTT
GGCAACCTCTCAGAGAAGTACGTCTTCATCACAGGCTGTGACTCTGGCTTCGGGAACCTG
CTGGCCAAACAGCTGGTTGATCGGGGCATGCAGGTGCTGGCTGCTTGCTTCACTGAGGAG
GGATCCCAGAAACTTCAGCGGGATACCTCCTATCGGCTGCAGACCACCCTACTGGATGTC
ACCAAGAGCGAAAGCATCAAGGCGGCGGCCCAGTGGGTGAGGGACAAAGTGGGCGAACAA
GGCCTCTGGGCCCTGGTGAACAATGCTGGTGTGGGCCTGCCCAGTGGTCCCAACGAATGG
CTGACCAAGGATGACTTTGTGAAGGTGATTAATGTGAACCTGGTGGGACTGATCGAAGTG
ACCCTTCACATGCTGCCCATGGTCAAGAGAGCCCGGGGCAGGGTTGTCAACATGTCCAGC
TCTGGTGGTCGTGTGGCTGTCATTGGTGGTGGCTACTGCGTCTCCAAGTTTGGCGTTGAG
GCCTTCTCTGACAGCATAAGGCGTGAGCTCTACTACTTTGGGGTGAAAGTCTGCATCATT
GAGCCAGGGAACTATCGGACAGCCATTCTCGGCAAGGAGAACCTGGAGTCACGCATGCGA
AAGCTTTGGGAGAGGCTGCCTCAGGAGACCCGGGACAGCTACGGAGAGGATTATTTCCGC
ATCTATACTGACAAGTTAAAAAACATAATGCAGGTGGCAGAGCCCAGAGTCAGAGATGTC
ATCAACAGCATGGAGCATGCTATTGTTTCCCGGAGCCCTCGCATCCGCTACAACCCTGGC
CTGGATGCCAAACTCCTCTACATCCCTCTGGCTAAGTTGCCCACCCCTGTGACAGATTTC
ATCCTAAGCCGGTACCTTCCAAGGCCAGCGGACAGTGTC

ORF Protein

Cloned ORF protein sequence for pFN21AE2734 Download

>KIEE2734  313 aa
MAALTDLSFMYRWFKNCNLVGNLSEKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEE
GSQKLQRDTSYRLQTTLLDVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEW
LTKDDFVKVINVNLVGLIEVTLHMLPMVKRARGRVVNMSSSGGRVAVIGGGYCVSKFGVE
AFSDSIRRELYYFGVKVCIIEPGNYRTAILGKENLESRMRKLWERLPQETRDSYGEDYFR
IYTDKLKNIMQVAEPRVRDVINSMEHAIVSRSPRIRYNPGLDAKLLYIPLAKLPTPVTDF
ILSRYLPRPADSV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE2734 Download

>pFN21AE2734  5644 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGCCCTCACAGACCTCTCATTTATGTATCG
CTGGTTCAAGAACTGCAATCTGGTTGGCAACCTCTCAGAGAAGTACGTCTTCATCACAGG
CTGTGACTCTGGCTTCGGGAACCTGCTGGCCAAACAGCTGGTTGATCGGGGCATGCAGGT
GCTGGCTGCTTGCTTCACTGAGGAGGGATCCCAGAAACTTCAGCGGGATACCTCCTATCG
GCTGCAGACCACCCTACTGGATGTCACCAAGAGCGAAAGCATCAAGGCGGCGGCCCAGTG
GGTGAGGGACAAAGTGGGCGAACAAGGCCTCTGGGCCCTGGTGAACAATGCTGGTGTGGG
CCTGCCCAGTGGTCCCAACGAATGGCTGACCAAGGATGACTTTGTGAAGGTGATTAATGT
GAACCTGGTGGGACTGATCGAAGTGACCCTTCACATGCTGCCCATGGTCAAGAGAGCCCG
GGGCAGGGTTGTCAACATGTCCAGCTCTGGTGGTCGTGTGGCTGTCATTGGTGGTGGCTA
CTGCGTCTCCAAGTTTGGCGTTGAGGCCTTCTCTGACAGCATAAGGCGTGAGCTCTACTA
CTTTGGGGTGAAAGTCTGCATCATTGAGCCAGGGAACTATCGGACAGCCATTCTCGGCAA
GGAGAACCTGGAGTCACGCATGCGAAAGCTTTGGGAGAGGCTGCCTCAGGAGACCCGGGA
CAGCTACGGAGAGGATTATTTCCGCATCTATACTGACAAGTTAAAAAACATAATGCAGGT
GGCAGAGCCCAGAGTCAGAGATGTCATCAACAGCATGGAGCATGCTATTGTTTCCCGGAG
CCCTCGCATCCGCTACAACCCTGGCCTGGATGCCAAACTCCTCTACATCCCTCTGGCTAA
GTTGCCCACCCCTGTGACAGATTTCATCCTAAGCCGGTACCTTCCAAGGCCAGCGGACAG
TGTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT