FYCO1 ORF clone pFN21AE2634

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Halotag ORF Clone pFN21AE2634

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Clone info.

Species

human

Clone Name

pFN21AE2634 Sequence (with vector) Restriction Map

Product ID

FHC35180

ORF Sequence

DNA sequence (4434 bp)
Protein sequence (1478 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE2634

Symbol

FYCO1

Alias : CATC2, CTRCT18, RUFY3, ZFYVE7

Description

FYVE and coiled-coil domain containing 1

Original Clone ID

cp01721

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Features of the cloned ORF sequence

Description

Length: 4434 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 1478 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2734.1 0 100.0 FYCO1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004012 59 165 PF02759 RUN IPR000306 1169 1231 PF01363 Zinc finger HMMSmart IPR000306 1165 1232 SM00064 Zinc finger ProfileScan IPR004012 36 169 PS50826 RUN IPR017455 1173 1231 PS50178 Zinc finger IPR009038 1337 1466 PS50866 GOLD
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_078789 1478 607182,610019 100.0 100.0 XP_006713397 1478 607182,610019 100.0 100.0 XP_011532413 1478 607182,610019 100.0 100.0 XP_006713396 1478 607182,610019 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE2634 Download

>KIEE2634  4434 bp
ATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGCT
GTGACAGAACTAAGCAAAGAATTTCAGGAAGCAGGGGAACCCATCACGGATGACAGCACC
AGCTTGCATAAATTTTCTTATAAACTTGAGTATCTCCTGCAATTTGATCAGAAAGAGAAG
GCCACCCTCCTGGGCAACAAGAAGGACTACTGGGATTACTTCTGTGCCTGCCTGGCCAAG
GTGAAAGGAGCCAATGATGGGATCCGATTTGTCAAGTCTATCTCAGAGCTCCGAACATCC
TTGGGGAAAGGAAGAGCATTTATTCGCTACTCCTTGGTGCACCAGAGGTTGGCAGACACC
TTACAGCAGTGCTTCATGAACACCAAAGTGACCAGTGACTGGTACTATGCAAGAAGCCCC
TTTCTGCAGCCAAAGCTGAGCTCGGACATTGTGGGCCAACTCTATGAGCTGACTGAGGTT
CAGTTTGACCTGGCGTCGAGGGGCTTTGACTTGGATGCTGCCTGGCCAACATTTGCCAGG
AGGACGCTGACCACTGGCTCTTCTGCTTACCTGTGGAAACCCCCTAGCCGCAGCTCCAGC
ATGAGCAGCTTGGTGAGCAGCTACCTGCAGACTCAAGAGATGGTGTCCAACTTTGACCTG
AACAGCCCCCTAAACAACGAGGCATTGGAGGGCTTTGATGAGATGCGACTAGAGCTGGAC
CAGTTGGAGGTGCGGGAGAAGCAGCTACGGGAGCGCATGCAGCAGCTGGACAGAGAGAAC
CAGGAGCTGAGGGCAGCTGTCAGCCAGCAAGGGGAGCAACTGCAGACAGAGAGGGAGAGG
GGGCGCACTGCAGCGGAGGACAACGTTCGCCTCACTTGCTTGGTAGCTGAGCTCCAGAAG
CAGTGGGAGGTCACCCAGGCCACCCAGAACACTGTGAAGGAGCTGCAGACATGCCTGCAG
GGCCTGGAGCTAGGAGCAGCAGAGAAGGAGGAGGACTACCACACAGCCCTGCGGCGGCTG
GAGTCCATGCTGCAGCCCTTGGCACAGGAGCTTGAGGCCACACGGGACTCACTGGACAAG
AAAAACCAGCATTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGGCAGAT
ACGGCATCAGACACAAAGGGCCGGCAAGAACCTATTCCCAGTGATGCGGCCCAGGAGATG
CAGGAGCTAGGGGAGAAGCTTCAAGCCCTAGAAAGGGAGAGAACCAAGGTCGAGGAGGTC
AACAGACAGCAGAGTGCCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGAAAGAGGAT
GCCCGGGCCAGCCTGGAGCGCCTGGTGAAGGAGATGGCCCCACTCCAGGAGGAGTTGTCT
GGGAAGGGACAGGAGGCAGACCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCACACG
AGCTCCTGGGAGGAGGAGCTAGCAGAGTTGAGGCGGGAGAAAAAACAGCAACAGGAGGAG
AAGGAGCTGCTGGAGCAGGAGGTCAGGTCTCTGACCCGGCAGCTGCAGTTCCTGGAGACC
CAGCTGGCACAGGTGAGCCAACATGTGAGTGACCTGGAGGAGCAGAAGAAGCAGCTCATT
CAGGACAAAGACCACCTCAGCCAGCAGGTGGGTATGCTCGAGCGGCTTGCTGGGCCGCCT
GGCCCAGAACTGCCAGTGGCAGGTGAGAAGAATGAGGCCCTGGTCCCTGTGAACTCCAGT
CTGCAAGAGGCCTGGGGGAAGCCAGAGGAGGAGCAGAGGGGCCTGCAGGAGGCACAGTTA
GACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAG
CTGGAGAAGGAGCTACAGAATGTGGTCGGGCGTAACCAGCTCCTGGAGGGCAAGCTGCAA
GCCCTGCAGGCCGATTACCAGGCTTTGCAGCAGCGGGAATCAGCCATCCAGGGCTCCTTG
GCCTCCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGATGGAGGCGAGC
TTGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGCC
ATTCTACAGAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGAGGTGGAGCAGTGCCAG
CAACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAG
ACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACT
GACAATGAAGCCCGTGAGCTGGCTGCCCAGCTAGCCCTGTCTCAGGCGCAGCTGGAAGTC
CATCAGGGGGAGGTCCAACGGCTGCAGGCTCAGGTGGTGGACCTCCAGGCCAAGATGCGG
GCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTG
AGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGCC
CATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGGGCC
GATGAGGCCCAGCAGAGGGAGGAGGAGCTGCGGGCCCTGCAGGAGGAGCTGTCCCAGGCC
AAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGG
GCCAACACAGACACAGCTGAGCTGGGCATCCAGGTTTGCGCACTGACCGTGGAAAAGGAG
CGAGTGGAGGAGGCACTGGCCTGTGCTGTCCAGGAGCTCCAGGACGCCAAAGAGGCAGCC
TCAAGGGAGCGAGAGGGCCTGGAGCGCCAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAGC
TTGCAGGAGAAGCTGAAGGCGGCCAAGGCAGCAGCCGGCTCACTGCCTGGCCTGCAGGCC
CAGCTCGCCCAGGCAGAGCAGCGGGCCCAGAGCCTCCAAGAGGCTGCACACCAGGAGCTC
AACACCCTCAAGTTCCAGCTGAGTGCTGAAATCATGGACTACCAGAGCAGACTTAAGAAT
GCTGGTGAAGAGTGCAAGAGCCTCAGGGGCCAGCTTGAGGAGCAAGGCCGGCAGCTGCAG
GCTGCTGAGGAAGCTGTGGAGAAGCTGAAGGCCACCCAAGCAGACATGGGAGAGAAGCTG
AGCTGCACTAGCAACCATCTTGCAGAGTGCCAGGCGGCCATGCTGAGGAAGGACAAGGAG
GGGGCTGCCCTGCGTGAAGACCTAGAAAGGACCCAGAAGGAACTCGAAAAAGCCACAACA
AAAATCCAAGAGTATTACAACAAACTCTGCCAGGAGGTGACAAATCGTGAGAGGAATGAC
CAGAAGATGCTTGCTGACCTGGATGACCTCAACAGAACCAAGAAGTATCTCGAGGAGCGG
CTGATAGAGCTGCTCAGGGACAAGGATGCTCTCTGGCAGAAGTCAGATGCCCTGGAATTC
CAGCAGAAGCTCAGTGCTGAGGAGAGATGGCTCGGAGACACAGAGGCAAACCACTGCCTC
GACTGTAAGCGGGAGTTCAGCTGGATGGTGCGGCGGCACCACTGCAGGATATGTGGCCGC
ATCTTCTGTTACTACTGCTGCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAAAGGAG
CGCTGCTGCCGAGCCTGTTTCCAGAAGCTCAGTGAAGGCCCTGGCTCCCCTGATAGCAGT
GGCTCAGGCACTAGCCAGGGAGAGCCCAGCCCTGCACTGTCACCAGCCTCACCTGGGCCC
CAGGCCACAGGAGGCCAAGGAGCAAATACAGACTACAGGCCACCGGACGACGCTGTGTTT
GATATCATCACAGATGAGGAATTGTGCCAGATACAGGAGTCCGGCTCCTCTTTGCCTGAA
ACACCCACTGAAACTGATTCTCTCGACCCAAATGCGGCTGAACAGGATACTACATCAACC
TCGCTAACGCCTGAGGACACTGAAGACATGCCCGTGGGGCAGGATTCGGAAATCTGCCTG
CTGAAGTCTGGAGAACTGATGATCAAAGTACCCCTCACAGTGGATGAGATCGCCAGCTTC
GGGGAGGGTAGCAGGGAGCTGTTTGTGAGGTCCAGCACCTACAGCCTGATCCCCATCACT
GTGGCCGAGGCAGGCCTCACCATCAGCTGGGTCTTCTCCTCTGACCCCAAGAGCATCTCC
TTCAGTGTGGTCTTCCAGGAGGCCGAGGACACACCGCTGGATCAGTGTAAGGTCCTCATT
CCCACGACCCGATGCAACTCCCACAAGGAGAACATCCAGGGCCAGCTCAAGGTTCGCACA
CCCGGCATCTACATGCTCATCTTCGACAATACCTTCTCAAGGTTTGTCTCTAAAAAGGTA
TTTTATCACTTGACGGTTGATCGGCCTGTGATCTACGATGGAAGTGATTTCCTG

ORF Protein

Cloned ORF protein sequence for pFN21AE2634 Download

>KIEE2634  1478 aa
MASTNAESQLQRIIRDLQDAVTELSKEFQEAGEPITDDSTSLHKFSYKLEYLLQFDQKEK
ATLLGNKKDYWDYFCACLAKVKGANDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLQPKLSSDIVGQLYELTEVQFDLASRGFDLDAAWPTFAR
RTLTTGSSAYLWKPPSRSSSMSSLVSSYLQTQEMVSNFDLNSPLNNEALEGFDEMRLELD
QLEVREKQLRERMQQLDRENQELRAAVSQQGEQLQTERERGRTAAEDNVRLTCLVAELQK
QWEVTQATQNTVKELQTCLQGLELGAAEKEEDYHTALRRLESMLQPLAQELEATRDSLDK
KNQHLASFPGWLAMAQQKADTASDTKGRQEPIPSDAAQEMQELGEKLQALERERTKVEEV
NRQQSAQLEQLVKELQLKEDARASLERLVKEMAPLQEELSGKGQEADQLWRRLQELLAHT
SSWEEELAELRREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQHVSDLEEQKKQLI
QDKDHLSQQVGMLERLAGPPGPELPVAGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQL
DDTKVQEGSQEEELRQANRELEKELQNVVGRNQLLEGKLQALQADYQALQQRESAIQGSL
ASLEAEQASIRHLGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQLREEVEQCQ
QLAEARHRELRALESQCQQQTQLIEVLTAEKGQQGVGPPTDNEARELAAQLALSQAQLEV
HQGEVQRLQAQVVDLQAKMRAALDDQDKVQSQLSMAEAVLREHKTLVQQLKEQNEALNRA
HVQELLQCSEREGALQEERADEAQQREEELRALQEELSQAKCSSEEAQLEHAELQEQLHR
ANTDTAELGIQVCALTVEKERVEEALACAVQELQDAKEAASREREGLERQVAGLQQEKES
LQEKLKAAKAAAGSLPGLQAQLAQAEQRAQSLQEAAHQELNTLKFQLSAEIMDYQSRLKN
AGEECKSLRGQLEEQGRQLQAAEEAVEKLKATQADMGEKLSCTSNHLAECQAAMLRKDKE
GAALREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEER
LIELLRDKDALWQKSDALEFQQKLSAEERWLGDTEANHCLDCKREFSWMVRRHHCRICGR
IFCYYCCNNYVLSKHGGKKERCCRACFQKLSEGPGSPDSSGSGTSQGEPSPALSPASPGP
QATGGQGANTDYRPPDDAVFDIITDEELCQIQESGSSLPETPTETDSLDPNAAEQDTTST
SLTPEDTEDMPVGQDSEICLLKSGELMIKVPLTVDEIASFGEGSRELFVRSSTYSLIPIT
VAEAGLTISWVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRT
PGIYMLIFDNTFSRFVSKKVFYHLTVDRPVIYDGSDFL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE2634 Download