FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2634, 1478 aa 1>>>pF1KE2634 1478 - 1478 aa - 1478 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.9570+/-0.00124; mu= -4.5157+/- 0.074 mean_var=496.3064+/-106.033, 0's: 0 Z-trim(112.2): 206 B-trim: 0 in 0/54 Lambda= 0.057570 statistics sampled from 12791 (12981) to 12791 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.399), width: 16 Scan time: 3.540 The best scores are: opt bits E(32554) CCDS2734.1 FYCO1 gene_id:79443|Hs108|chr3 (1478) 9561 810.4 0 >>CCDS2734.1 FYCO1 gene_id:79443|Hs108|chr3 (1478 aa) initn: 9561 init1: 9561 opt: 9561 Z-score: 4311.7 bits: 810.4 E(32554): 0 Smith-Waterman score: 9561; 100.0% identity (100.0% similar) in 1478 aa overlap (1-1478:1-1478) 10 20 30 40 50 60 pF1KE2 MASTNAESQLQRIIRDLQDAVTELSKEFQEAGEPITDDSTSLHKFSYKLEYLLQFDQKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 MASTNAESQLQRIIRDLQDAVTELSKEFQEAGEPITDDSTSLHKFSYKLEYLLQFDQKEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ATLLGNKKDYWDYFCACLAKVKGANDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 ATLLGNKKDYWDYFCACLAKVKGANDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 LQQCFMNTKVTSDWYYARSPFLQPKLSSDIVGQLYELTEVQFDLASRGFDLDAAWPTFAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 LQQCFMNTKVTSDWYYARSPFLQPKLSSDIVGQLYELTEVQFDLASRGFDLDAAWPTFAR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RTLTTGSSAYLWKPPSRSSSMSSLVSSYLQTQEMVSNFDLNSPLNNEALEGFDEMRLELD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 RTLTTGSSAYLWKPPSRSSSMSSLVSSYLQTQEMVSNFDLNSPLNNEALEGFDEMRLELD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 QLEVREKQLRERMQQLDRENQELRAAVSQQGEQLQTERERGRTAAEDNVRLTCLVAELQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 QLEVREKQLRERMQQLDRENQELRAAVSQQGEQLQTERERGRTAAEDNVRLTCLVAELQK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 QWEVTQATQNTVKELQTCLQGLELGAAEKEEDYHTALRRLESMLQPLAQELEATRDSLDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 QWEVTQATQNTVKELQTCLQGLELGAAEKEEDYHTALRRLESMLQPLAQELEATRDSLDK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KNQHLASFPGWLAMAQQKADTASDTKGRQEPIPSDAAQEMQELGEKLQALERERTKVEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 KNQHLASFPGWLAMAQQKADTASDTKGRQEPIPSDAAQEMQELGEKLQALERERTKVEEV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 NRQQSAQLEQLVKELQLKEDARASLERLVKEMAPLQEELSGKGQEADQLWRRLQELLAHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 NRQQSAQLEQLVKELQLKEDARASLERLVKEMAPLQEELSGKGQEADQLWRRLQELLAHT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SSWEEELAELRREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQHVSDLEEQKKQLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 SSWEEELAELRREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQHVSDLEEQKKQLI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 QDKDHLSQQVGMLERLAGPPGPELPVAGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 QDKDHLSQQVGMLERLAGPPGPELPVAGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 DDTKVQEGSQEEELRQANRELEKELQNVVGRNQLLEGKLQALQADYQALQQRESAIQGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 DDTKVQEGSQEEELRQANRELEKELQNVVGRNQLLEGKLQALQADYQALQQRESAIQGSL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 ASLEAEQASIRHLGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQLREEVEQCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 ASLEAEQASIRHLGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQLREEVEQCQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 QLAEARHRELRALESQCQQQTQLIEVLTAEKGQQGVGPPTDNEARELAAQLALSQAQLEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 QLAEARHRELRALESQCQQQTQLIEVLTAEKGQQGVGPPTDNEARELAAQLALSQAQLEV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 HQGEVQRLQAQVVDLQAKMRAALDDQDKVQSQLSMAEAVLREHKTLVQQLKEQNEALNRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 HQGEVQRLQAQVVDLQAKMRAALDDQDKVQSQLSMAEAVLREHKTLVQQLKEQNEALNRA 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE2 HVQELLQCSEREGALQEERADEAQQREEELRALQEELSQAKCSSEEAQLEHAELQEQLHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 HVQELLQCSEREGALQEERADEAQQREEELRALQEELSQAKCSSEEAQLEHAELQEQLHR 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE2 ANTDTAELGIQVCALTVEKERVEEALACAVQELQDAKEAASREREGLERQVAGLQQEKES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 ANTDTAELGIQVCALTVEKERVEEALACAVQELQDAKEAASREREGLERQVAGLQQEKES 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE2 LQEKLKAAKAAAGSLPGLQAQLAQAEQRAQSLQEAAHQELNTLKFQLSAEIMDYQSRLKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 LQEKLKAAKAAAGSLPGLQAQLAQAEQRAQSLQEAAHQELNTLKFQLSAEIMDYQSRLKN 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE2 AGEECKSLRGQLEEQGRQLQAAEEAVEKLKATQADMGEKLSCTSNHLAECQAAMLRKDKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 AGEECKSLRGQLEEQGRQLQAAEEAVEKLKATQADMGEKLSCTSNHLAECQAAMLRKDKE 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE2 GAALREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 GAALREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEER 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE2 LIELLRDKDALWQKSDALEFQQKLSAEERWLGDTEANHCLDCKREFSWMVRRHHCRICGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 LIELLRDKDALWQKSDALEFQQKLSAEERWLGDTEANHCLDCKREFSWMVRRHHCRICGR 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE2 IFCYYCCNNYVLSKHGGKKERCCRACFQKLSEGPGSPDSSGSGTSQGEPSPALSPASPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 IFCYYCCNNYVLSKHGGKKERCCRACFQKLSEGPGSPDSSGSGTSQGEPSPALSPASPGP 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE2 QATGGQGANTDYRPPDDAVFDIITDEELCQIQESGSSLPETPTETDSLDPNAAEQDTTST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 QATGGQGANTDYRPPDDAVFDIITDEELCQIQESGSSLPETPTETDSLDPNAAEQDTTST 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE2 SLTPEDTEDMPVGQDSEICLLKSGELMIKVPLTVDEIASFGEGSRELFVRSSTYSLIPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 SLTPEDTEDMPVGQDSEICLLKSGELMIKVPLTVDEIASFGEGSRELFVRSSTYSLIPIT 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE2 VAEAGLTISWVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 VAEAGLTISWVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRT 1390 1400 1410 1420 1430 1440 1450 1460 1470 pF1KE2 PGIYMLIFDNTFSRFVSKKVFYHLTVDRPVIYDGSDFL :::::::::::::::::::::::::::::::::::::: CCDS27 PGIYMLIFDNTFSRFVSKKVFYHLTVDRPVIYDGSDFL 1450 1460 1470 1478 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 17:32:51 2016 done: Tue Nov 8 17:32:51 2016 Total Scan time: 3.540 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]