TRAIP ORF clone pFN21AE1930

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1930

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Clone info.

Species

human

Clone Name

pFN21AE1930 Sequence (with vector) Restriction Map

Product ID

FHC21547

ORF Sequence

DNA sequence (1407 bp)
Protein sequence (469 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590668]

Gene

KIEE1930

Symbol

TRAIP

Alias : RNF206, SCKL9, TRIP

Description

TRAF interacting protein

Original Clone ID

cs02830

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1407 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 469 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2806.1 7.3e-92 100.0 TRAIP The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 7 49 PF00097 Zinc finger HMMSmart IPR001841 7 49 SM00184 Zinc finger ProfileScan IPR001841 7 50 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005870 469 605958,616777 100.0 100.0 XP_011531566 392 605958,616777 100.0 80.2 XP_016861015 370 605958,616777 78.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1930 Download

>KIEE1930  1407 bp
ATGCCTATCCGTGCTCTGTGCACTATCTGCTCCGACTTCTTCGATCACTCCCGCGACGTG
GCCGCCATCCACTGCGGCCACACCTTCCACTTGCAGTGCCTAATTCAGTGGTTTGAGACA
GCACCAAGTCGGACCTGCCCACAGTGCCGAATCCAGGTTGGCAAAAGAACCATTATCAAT
AAGCTCTTCTTTGATCTTGCCCAGGAGGAGGAGAATGTCTTGGATGCAGAATTCTTAAAG
AATGAACTGGACAATGTCAGAGCCCAGCTTTCCCAGAAAGACAAGGAGAAACGAGACAGC
CAGGTCATCATCGACACTCTGCGGGATACGCTGGAAGAACGCAATGCTACTGTGGTATCT
CTGCAGCAGGCCTTGGGCAAGGCCGAGATGCTGTGCTCCACACTGAAAAAGCAGATGAAG
TACTTAGAGCAGCAGCAGGATGAGACCAAACAAGCACAAGAGGAGGCCCGCCGGCTCAGG
AGCAAGATGAAGACCATGGAGCAGATTGAGCTTCTACTCCAGAGCCAGCGCCCTGAGGTG
GAGGAGATGATCCGAGACATGGGTGTGGGACAGTCAGCGGTGGAACAGCTGGCTGTGTAC
TGTGTGTCTCTCAAGAAAGAGTACGAGAATCTAAAAGAGGCACGGAAGGCCTCAGGGGAG
GTGGCTGACAAGCTGAGGAAGGATTTGTTTTCCTCCAGAAGCAAGTTGCAGACAGTCTAC
TCTGAATTGGATCAGGCCAAGTTAGAACTGAAGTCAGCCCAGAAGGACTTACAGAGTGCT
GACAAGGAAATCATGAGCCTGAAAAAGAAGCTAACGATGCTGCAGGAAACCTTGAACCTG
CCACCAGTGGCCAGTGAGACTGTCGACCGCCTGGTTTTAGAGAGCCCAGCCCCTGTGGAG
GTGAATCTGAAGCTCCGCCGGCCATCCTTCCGTGATGATATTGATCTCAATGCTACCTTT
GATGTGGATACTCCCCCAGCCCGGCCCTCCAGCTCCCAGCATGGTTACTACGAAAAACTT
TGCCTAGAGAAGTCACACTCCCCAATTCAGGATGTCCCCAAGAAGATATGCAAAGGCCCC
AGGAAGGAGTCCCAGCTCTCACTGGGTGGCCAGAGCTGTGCAGGAGAGCCAGATGAGGAA
CTGGTTGGTGCCTTCCCTATTTTTGTCCGGAATGCCATCCTAGGCCAGAAACAGCCCAAG
AGGCCCAGGTCAGAGTCCTCTTGCAGCAAAGATGTGGTAAGGACAGGCTTCGATGGGCTC
GGTGGCCGGACAAAATTCATCCAGCCTACTGACACAGTCATGATCCGCCCATTGCCTGTT
AAGCCCAAGACCAAGGTTAAGCAGAGGGTGAGGGTGAAGACAGTGCCTTCTCTCTTCCAG
GCCAAGCTGGACACCTTCCTGTGGTCG

ORF Protein

Cloned ORF protein sequence for pFN21AE1930 Download

>KIEE1930  469 aa
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIIN
KLFFDLAQEEENVLDAEFLKNELDNVRAQLSQKDKEKRDSQVIIDTLRDTLEERNATVVS
LQQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGEVADKLRKDLFSSRSKLQTVY
SELDQAKLELKSAQKDLQSADKEIMSLKKKLTMLQETLNLPPVASETVDRLVLESPAPVE
VNLKLRRPSFRDDIDLNATFDVDTPPARPSSSQHGYYEKLCLEKSHSPIQDVPKKICKGP
RKESQLSLGGQSCAGEPDEELVGAFPIFVRNAILGQKQPKRPRSESSCSKDVVRTGFDGL
GGRTKFIQPTDTVMIRPLPVKPKTKVKQRVRVKTVPSLFQAKLDTFLWS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1930 Download

>pFN21AE1930  6112 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCTATCCGTGCTCTGTGCACTATCTGCTCCGA
CTTCTTCGATCACTCCCGCGACGTGGCCGCCATCCACTGCGGCCACACCTTCCACTTGCA
GTGCCTAATTCAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCACAGTGCCGAATCCA
GGTTGGCAAAAGAACCATTATCAATAAGCTCTTCTTTGATCTTGCCCAGGAGGAGGAGAA
TGTCTTGGATGCAGAATTCTTAAAGAATGAACTGGACAATGTCAGAGCCCAGCTTTCCCA
GAAAGACAAGGAGAAACGAGACAGCCAGGTCATCATCGACACTCTGCGGGATACGCTGGA
AGAACGCAATGCTACTGTGGTATCTCTGCAGCAGGCCTTGGGCAAGGCCGAGATGCTGTG
CTCCACACTGAAAAAGCAGATGAAGTACTTAGAGCAGCAGCAGGATGAGACCAAACAAGC
ACAAGAGGAGGCCCGCCGGCTCAGGAGCAAGATGAAGACCATGGAGCAGATTGAGCTTCT
ACTCCAGAGCCAGCGCCCTGAGGTGGAGGAGATGATCCGAGACATGGGTGTGGGACAGTC
AGCGGTGGAACAGCTGGCTGTGTACTGTGTGTCTCTCAAGAAAGAGTACGAGAATCTAAA
AGAGGCACGGAAGGCCTCAGGGGAGGTGGCTGACAAGCTGAGGAAGGATTTGTTTTCCTC
CAGAAGCAAGTTGCAGACAGTCTACTCTGAATTGGATCAGGCCAAGTTAGAACTGAAGTC
AGCCCAGAAGGACTTACAGAGTGCTGACAAGGAAATCATGAGCCTGAAAAAGAAGCTAAC
GATGCTGCAGGAAACCTTGAACCTGCCACCAGTGGCCAGTGAGACTGTCGACCGCCTGGT
TTTAGAGAGCCCAGCCCCTGTGGAGGTGAATCTGAAGCTCCGCCGGCCATCCTTCCGTGA
TGATATTGATCTCAATGCTACCTTTGATGTGGATACTCCCCCAGCCCGGCCCTCCAGCTC
CCAGCATGGTTACTACGAAAAACTTTGCCTAGAGAAGTCACACTCCCCAATTCAGGATGT
CCCCAAGAAGATATGCAAAGGCCCCAGGAAGGAGTCCCAGCTCTCACTGGGTGGCCAGAG
CTGTGCAGGAGAGCCAGATGAGGAACTGGTTGGTGCCTTCCCTATTTTTGTCCGGAATGC
CATCCTAGGCCAGAAACAGCCCAAGAGGCCCAGGTCAGAGTCCTCTTGCAGCAAAGATGT
GGTAAGGACAGGCTTCGATGGGCTCGGTGGCCGGACAAAATTCATCCAGCCTACTGACAC
AGTCATGATCCGCCCATTGCCTGTTAAGCCCAAGACCAAGGTTAAGCAGAGGGTGAGGGT
GAAGACAGTGCCTTCTCTCTTCCAGGCCAAGCTGGACACCTTCCTGTGGTCGGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT