GBX1 ORF clone pFN21AE0612

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0612

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Clone info.

Species

human

Clone Name

pFN21AE0612 Sequence (with vector) Restriction Map

Product ID

FHC30249

ORF Sequence

DNA sequence (1089 bp)
Protein sequence (363 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE0612

Symbol

GBX1

Alias : Huh-17

Description

gastrulation brain homeobox 1

Original Clone ID

cs02112

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1089 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 363 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43682.1 3.1e-72 100.0 GBX1 CCDS2515.1 7e-17 51.9 GBX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 283 294 PR00024 Homeobox IPR020479 298 308 PR00024 Homeobox IPR020479 308 317 PR00024 Homeobox HMMPfam IPR001356 262 318 PF00046 Homeobox HMMSmart IPR001356 261 323 SM00389 Homeobox ProfileScan IPR001356 259 319 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001092304 363 603354 100.0 100.0 NP_001476 348 601135 51.9 94.8 NP_002132 320 142953 32.2 88.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0612 Download

>KIEE0612  1089 bp
ATGCAGCGGGCCGGAGGCGGTAGCGCCCCTGGGGGCAACGGCGGGGGCGGCGGCGGGGGC
CCGGGCACTGCCTTCTCCATCGACTCCCTAATCGGGCCGCCGCCGCCGCGCTCCGGCCAC
TTGCTGTACACCGGCTACCCCATGTTCATGCCCTACCGGCCGCTCGTGCTGCCGCAGGCG
CTGGCCCCTGCGCCGCTGCCCGCTGGCCTCCCGCCCCTCGCCCCGCTAGCCTCTTTCGCC
GGCCGCCTTACCAACACCTTCTGCGCGGGGCTGGGTCAGGCTGTGCCCTCGATGGTGGCG
CTGACCACCGCGCTGCCCAGCTTCGCGGAGCCGCCCGACGCTTTCTACGGGCCCCAGGAG
CTCGCCGCCGCCGCTGCCGCCGCCGCCGCCACTGCCGCCCGAAACAACCCCGAGCCAGGC
GGCCGACGCCCAGAGGGTGGGCTGGAAGCTGATGAGCTGCTGCCGGCCCGGGAGAAAGTG
GCAGAGCCCCCACCACCTCCGCCTCCGCACTTCTCAGAGACTTTTCCAAGTCTGCCCGCA
GAGGGGAAGGTGTACAGCTCAGATGAGGAGAAGCTGGAGGCATCAGCAGGAGACCCAGCA
GGCAGCGAACAGGAGGAAGAGGGCTCAGGCGGTGACAGCGAGGATGACGGTTTCCTGGAC
AGTTCTGCAGGGGGCCCAGGGGCTCTTCTGGGACCTAAACCGAAGCTAAAGGGAAGCCTG
GGGACTGGAGCTGAGGAGGGGGCACCGGTGACAGCAGGGGTCACAGCTCCTGGGGGGAAA
AGCCGACGGCGCCGCACAGCATTTACCAGCGAGCAGCTTTTGGAATTGGAGAAGGAATTT
CATTGCAAGAAATACCTGAGCTTGACAGAGCGCTCTCAGATCGCCCACGCCCTCAAGCTC
AGTGAGGTGCAGGTCAAGATCTGGTTTCAGAATCGACGGGCCAAGTGGAAGCGCATCAAA
GCTGGCAATGTGAGCAGCCGTTCTGGGGAGCCCGTAAGAAACCCCAAGATTGTTGTCCCC
ATACCTGTGCATGTCAACAGGTTTGCTGTGCGGAGCCAGCACCAACAAATGGAGCAGGGG
GCCCGGCCC

ORF Protein

Cloned ORF protein sequence for pFN21AE0612 Download

>KIEE0612  363 aa
MQRAGGGSAPGGNGGGGGGGPGTAFSIDSLIGPPPPRSGHLLYTGYPMFMPYRPLVLPQA
LAPAPLPAGLPPLAPLASFAGRLTNTFCAGLGQAVPSMVALTTALPSFAEPPDAFYGPQE
LAAAAAAAAATAARNNPEPGGRRPEGGLEADELLPAREKVAEPPPPPPPHFSETFPSLPA
EGKVYSSDEEKLEASAGDPAGSEQEEEGSGGDSEDDGFLDSSAGGPGALLGPKPKLKGSL
GTGAEEGAPVTAGVTAPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKL
SEVQVKIWFQNRRAKWKRIKAGNVSSRSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQG
ARP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0612 Download

>pFN21AE0612  5794 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAGCGGGCCGGAGGCGGTAGCGCCCCTGGGGG
CAACGGCGGGGGCGGCGGCGGGGGCCCGGGCACTGCCTTCTCCATCGACTCCCTAATCGG
GCCGCCGCCGCCGCGCTCCGGCCACTTGCTGTACACCGGCTACCCCATGTTCATGCCCTA
CCGGCCGCTCGTGCTGCCGCAGGCGCTGGCCCCTGCGCCGCTGCCCGCTGGCCTCCCGCC
CCTCGCCCCGCTAGCCTCTTTCGCCGGCCGCCTTACCAACACCTTCTGCGCGGGGCTGGG
TCAGGCTGTGCCCTCGATGGTGGCGCTGACCACCGCGCTGCCCAGCTTCGCGGAGCCGCC
CGACGCTTTCTACGGGCCCCAGGAGCTCGCCGCCGCCGCTGCCGCCGCCGCCGCCACTGC
CGCCCGAAACAACCCCGAGCCAGGCGGCCGACGCCCAGAGGGTGGGCTGGAAGCTGATGA
GCTGCTGCCGGCCCGGGAGAAAGTGGCAGAGCCCCCACCACCTCCGCCTCCGCACTTCTC
AGAGACTTTTCCAAGTCTGCCCGCAGAGGGGAAGGTGTACAGCTCAGATGAGGAGAAGCT
GGAGGCATCAGCAGGAGACCCAGCAGGCAGCGAACAGGAGGAAGAGGGCTCAGGCGGTGA
CAGCGAGGATGACGGTTTCCTGGACAGTTCTGCAGGGGGCCCAGGGGCTCTTCTGGGACC
TAAACCGAAGCTAAAGGGAAGCCTGGGGACTGGAGCTGAGGAGGGGGCACCGGTGACAGC
AGGGGTCACAGCTCCTGGGGGGAAAAGCCGACGGCGCCGCACAGCATTTACCAGCGAGCA
GCTTTTGGAATTGGAGAAGGAATTTCATTGCAAGAAATACCTGAGCTTGACAGAGCGCTC
TCAGATCGCCCACGCCCTCAAGCTCAGTGAGGTGCAGGTCAAGATCTGGTTTCAGAATCG
ACGGGCCAAGTGGAAGCGCATCAAAGCTGGCAATGTGAGCAGCCGTTCTGGGGAGCCCGT
AAGAAACCCCAAGATTGTTGTCCCCATACCTGTGCATGTCAACAGGTTTGCTGTGCGGAG
CCAGCACCAACAAATGGAGCAGGGGGCCCGGCCCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT