NPTXR ORF clone pFN21AE0384

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Halotag ORF Clone pFN21AE0384

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Clone info.

Species

human

Clone Name

pFN21AE0384 Sequence (with vector) Restriction Map

Product ID

FHC11003

Flexi Clone PID

FXC11003

ORF Sequence

DNA sequence (1467 bp)
Protein sequence (489 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527378]

Gene

KIEE0384

Symbol

NPTXR

Alias : NPR

Description

neuronal pentraxin receptor

Original Clone ID

oc01084

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1467 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 489 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33647.1 1e-116 100.0 NPTXR CCDS5657.1 1.2e-47 51.5 NPTX2 CCDS32762.1 8.1e-42 48.7 NPTX1 CCDS48004.1 5.9e-11 39.0 SVEP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001759 305 319 PR00895 Pentaxin IPR001759 327 341 PR00895 Pentaxin IPR001759 370 388 PR00895 Pentaxin IPR001759 397 416 PR00895 Pentaxin IPR001759 417 436 PR00895 Pentaxin IPR001759 436 450 PR00895 Pentaxin IPR001759 456 467 PR00895 Pentaxin HMMPfam IPR001759 291 472 PF00354 Pentaxin HMMSmart IPR001759 277 483 SM00159 Pentaxin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MLAFLGAVICIIASVPLAASPAR 23 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055108 500 609474 100.0 100.0 NP_002514 431 600750 51.5 86.1 NP_002513 432 602367 48.7 83.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0384 Download

>KIEE0384  1467 bp
ATGCTGGCGTTCCTCGGTGCCGTCATCTGCATCATCGCCAGCGTGCCCCTGGCGGCCAGC
CCGGCGCGGGCGCTGCCCGGCGGCGCCGACAATGCTTCGGTCGCCTCGGGCGCCGCCGCG
TCCCCGGGCCCGCAGCGGAGCCTGAGCGCGCTGCACGGCGCGGGCGGTTCAGCCGGGCCC
CCCGCGCTGCCCGGGGCACCCGCGGCCAGCGCGCACCCGCTGCCGCCCGGGCCCCTGTTC
AGCCGCTTCCTGTGCACGCCGCTGGCTGCTGCCTGCCCGTCGGGGGCCCAGCAGGGGGAC
GCGGCGGGCGCTGCGCCGGGCGAGCGCGAAGAGCTGCTGCTGCTGCAGAGCACGGCCGAG
CAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCATC
CGTGAGCTCACCGGCAAGCTGGGCCGCTGCGAGAGCGGCCTGCCGCGCGGCCTCCAGGGC
GCCGGGCCCCGCCGCGACACCATGGCCGACGGGCCCTGGGACTCGCCTGCGCTCATTCTG
GAGCTGGAGGACGCCGTGCGCGCCCTGCGGGACCGCATCGACCGCCTGGAGCAGGAGCTT
CCAGCCCGTGTGAACCTCTCAGCTGCCCCAGCCCCAGTCTCTGCTGTGCCCACCGGCCTA
CACTCCAAGATGGACCAGCTGGAGGGGCAGCTGCTGGCCCAGGTGCTGGCACTGGAGAAG
GAGCGTGTGGCCCTCAGCCACAGCAGCCGCCGGCAGAGGCAGGAAGTGGAAAAGGAGTTG
GACGTCCTGCAGGGTCGTGTGGCTGAGCTGGAGCACGGGTCCTCAGCCTACAGTCCTCCA
GATGCCTTCAAGATCAGCATCCCCATCCGTAACAACTACATGTACGCCCGCGTGCGGAAG
GCTCTGCCCGAGCTCTACGCATTCACCGCCTGCATGTGGCTGCGGTCCAGGTCCAGCGGC
ACCGGCCAGGGCACCCCCTTCTCCTACTCAGTGCCCGGGCAGGCCAACGAGATTGTACTG
CTAGAGGCGGGCCATGAGCCCATGGAGCTGCTGATCAACGACAAGGTGGCCCAGCTGCCC
CTGAGCCTGAAGGACAATGGCTGGCACCACATCTGCATCGCCTGGACCACAAGGGATGGC
CTATGGTCTGCCTACCAGGACGGGGAGCTGCAGGGCTCCGGTGAGAACCTGGCTGCCTGG
CACCCCATCAAGCCTCATGGGATCCTTATCTTGGGCCAGGAGCAGGATACCCTGGGTGGC
CGGTTTGATGCCACCCAGGCCTTTGTCGGTGACATTGCCCAGTTTAACCTGTGGGACCAC
GCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAAC
GTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTTTGGGGGTGCAACAAAGGCTGCCTTC
GATGTCTGCAAGGGGAGGGCCAAGGCA

ORF Protein

Cloned ORF protein sequence for pFN21AE0384 Download

>KIEE0384  489 aa
MLAFLGAVICIIASVPLAASPARALPGGADNASVASGAAASPGPQRSLSALHGAGGSAGP
PALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAPGEREELLLLQSTAE
QLRQTALQQEARIRADQDTIRELTGKLGRCESGLPRGLQGAGPRRDTMADGPWDSPALIL
ELEDAVRALRDRIDRLEQELPARVNLSAAPAPVSAVPTGLHSKMDQLEGQLLAQVLALEK
ERVALSHSSRRQRQEVEKELDVLQGRVAELEHGSSAYSPPDAFKISIPIRNNYMYARVRK
ALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQANEIVLLEAGHEPMELLINDKVAQLP
LSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSGENLAAWHPIKPHGILILGQEQDTLGG
RFDATQAFVGDIAQFNLWDHALTPAQVLGIANCTAPLLGNVLPWEDKLVEAFGGATKAAF
DVCKGRAKA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0384 Download

>pFN21AE0384  6172 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGGCGTTCCTCGGTGCCGTCATCTGCATCAT
CGCCAGCGTGCCCCTGGCGGCCAGCCCGGCGCGGGCGCTGCCCGGCGGCGCCGACAATGC
TTCGGTCGCCTCGGGCGCCGCCGCGTCCCCGGGCCCGCAGCGGAGCCTGAGCGCGCTGCA
CGGCGCGGGCGGTTCAGCCGGGCCCCCCGCGCTGCCCGGGGCACCCGCGGCCAGCGCGCA
CCCGCTGCCGCCCGGGCCCCTGTTCAGCCGCTTCCTGTGCACGCCGCTGGCTGCTGCCTG
CCCGTCGGGGGCCCAGCAGGGGGACGCGGCGGGCGCTGCGCCGGGCGAGCGCGAAGAGCT
GCTGCTGCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCG
CATCCGCGCCGACCAGGACACCATCCGTGAGCTCACCGGCAAGCTGGGCCGCTGCGAGAG
CGGCCTGCCGCGCGGCCTCCAGGGCGCCGGGCCCCGCCGCGACACCATGGCCGACGGGCC
CTGGGACTCGCCTGCGCTCATTCTGGAGCTGGAGGACGCCGTGCGCGCCCTGCGGGACCG
CATCGACCGCCTGGAGCAGGAGCTTCCAGCCCGTGTGAACCTCTCAGCTGCCCCAGCCCC
AGTCTCTGCTGTGCCCACCGGCCTACACTCCAAGATGGACCAGCTGGAGGGGCAGCTGCT
GGCCCAGGTGCTGGCACTGGAGAAGGAGCGTGTGGCCCTCAGCCACAGCAGCCGCCGGCA
GAGGCAGGAAGTGGAAAAGGAGTTGGACGTCCTGCAGGGTCGTGTGGCTGAGCTGGAGCA
CGGGTCCTCAGCCTACAGTCCTCCAGATGCCTTCAAGATCAGCATCCCCATCCGTAACAA
CTACATGTACGCCCGCGTGCGGAAGGCTCTGCCCGAGCTCTACGCATTCACCGCCTGCAT
GTGGCTGCGGTCCAGGTCCAGCGGCACCGGCCAGGGCACCCCCTTCTCCTACTCAGTGCC
CGGGCAGGCCAACGAGATTGTACTGCTAGAGGCGGGCCATGAGCCCATGGAGCTGCTGAT
CAACGACAAGGTGGCCCAGCTGCCCCTGAGCCTGAAGGACAATGGCTGGCACCACATCTG
CATCGCCTGGACCACAAGGGATGGCCTATGGTCTGCCTACCAGGACGGGGAGCTGCAGGG
CTCCGGTGAGAACCTGGCTGCCTGGCACCCCATCAAGCCTCATGGGATCCTTATCTTGGG
CCAGGAGCAGGATACCCTGGGTGGCCGGTTTGATGCCACCCAGGCCTTTGTCGGTGACAT
TGCCCAGTTTAACCTGTGGGACCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAA
CTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTT
TGGGGGTGCAACAAAGGCTGCCTTCGATGTCTGCAAGGGGAGGGCCAAGGCAGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT