NPTXR ORF clone FXC11003

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Flexi ORF Clone FXC11003

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Clone info.

Species

human

Clone Name

pF1KE0384 Sequence (with vector) Restriction Map

Product ID

FXC11003

HaloTag Clone PID

FHC11003

ORF Sequence

DNA sequence (1467 bp)
Protein sequence (489 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527378]

Gene

KIEE0384

Symbol

NPTXR

Alias : NPR

Description

neuronal pentraxin receptor

Original Clone ID

oc01084

Features of the cloned ORF sequence

Description

Length: 1467 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 489 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33647.1 1e-116 100.0 NPTXR CCDS5657.1 1.2e-47 51.5 NPTX2 CCDS32762.1 8.1e-42 48.7 NPTX1 CCDS48004.1 5.9e-11 39.0 SVEP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001759 305 319 PR00895 Pentaxin IPR001759 327 341 PR00895 Pentaxin IPR001759 370 388 PR00895 Pentaxin IPR001759 397 416 PR00895 Pentaxin IPR001759 417 436 PR00895 Pentaxin IPR001759 436 450 PR00895 Pentaxin IPR001759 456 467 PR00895 Pentaxin HMMPfam IPR001759 291 472 PF00354 Pentaxin HMMSmart IPR001759 277 483 SM00159 Pentaxin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MLAFLGAVICIIASVPLAASPAR 23 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055108 500 609474 100.0 100.0 NP_002514 431 600750 51.5 86.1 NP_002513 432 602367 48.7 83.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0384 Download

>KIEE0384  1467 bp
ATGCTGGCGTTCCTCGGTGCCGTCATCTGCATCATCGCCAGCGTGCCCCTGGCGGCCAGC
CCGGCGCGGGCGCTGCCCGGCGGCGCCGACAATGCTTCGGTCGCCTCGGGCGCCGCCGCG
TCCCCGGGCCCGCAGCGGAGCCTGAGCGCGCTGCACGGCGCGGGCGGTTCAGCCGGGCCC
CCCGCGCTGCCCGGGGCACCCGCGGCCAGCGCGCACCCGCTGCCGCCCGGGCCCCTGTTC
AGCCGCTTCCTGTGCACGCCGCTGGCTGCTGCCTGCCCGTCGGGGGCCCAGCAGGGGGAC
GCGGCGGGCGCTGCGCCGGGCGAGCGCGAAGAGCTGCTGCTGCTGCAGAGCACGGCCGAG
CAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCATC
CGTGAGCTCACCGGCAAGCTGGGCCGCTGCGAGAGCGGCCTGCCGCGCGGCCTCCAGGGC
GCCGGGCCCCGCCGCGACACCATGGCCGACGGGCCCTGGGACTCGCCTGCGCTCATTCTG
GAGCTGGAGGACGCCGTGCGCGCCCTGCGGGACCGCATCGACCGCCTGGAGCAGGAGCTT
CCAGCCCGTGTGAACCTCTCAGCTGCCCCAGCCCCAGTCTCTGCTGTGCCCACCGGCCTA
CACTCCAAGATGGACCAGCTGGAGGGGCAGCTGCTGGCCCAGGTGCTGGCACTGGAGAAG
GAGCGTGTGGCCCTCAGCCACAGCAGCCGCCGGCAGAGGCAGGAAGTGGAAAAGGAGTTG
GACGTCCTGCAGGGTCGTGTGGCTGAGCTGGAGCACGGGTCCTCAGCCTACAGTCCTCCA
GATGCCTTCAAGATCAGCATCCCCATCCGTAACAACTACATGTACGCCCGCGTGCGGAAG
GCTCTGCCCGAGCTCTACGCATTCACCGCCTGCATGTGGCTGCGGTCCAGGTCCAGCGGC
ACCGGCCAGGGCACCCCCTTCTCCTACTCAGTGCCCGGGCAGGCCAACGAGATTGTACTG
CTAGAGGCGGGCCATGAGCCCATGGAGCTGCTGATCAACGACAAGGTGGCCCAGCTGCCC
CTGAGCCTGAAGGACAATGGCTGGCACCACATCTGCATCGCCTGGACCACAAGGGATGGC
CTATGGTCTGCCTACCAGGACGGGGAGCTGCAGGGCTCCGGTGAGAACCTGGCTGCCTGG
CACCCCATCAAGCCTCATGGGATCCTTATCTTGGGCCAGGAGCAGGATACCCTGGGTGGC
CGGTTTGATGCCACCCAGGCCTTTGTCGGTGACATTGCCCAGTTTAACCTGTGGGACCAC
GCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAAC
GTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTTTGGGGGTGCAACAAAGGCTGCCTTC
GATGTCTGCAAGGGGAGGGCCAAGGCA

ORF Protein

Cloned ORF protein sequence for pF1KE0384 Download

>KIEE0384  489 aa
MLAFLGAVICIIASVPLAASPARALPGGADNASVASGAAASPGPQRSLSALHGAGGSAGP
PALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAPGEREELLLLQSTAE
QLRQTALQQEARIRADQDTIRELTGKLGRCESGLPRGLQGAGPRRDTMADGPWDSPALIL
ELEDAVRALRDRIDRLEQELPARVNLSAAPAPVSAVPTGLHSKMDQLEGQLLAQVLALEK
ERVALSHSSRRQRQEVEKELDVLQGRVAELEHGSSAYSPPDAFKISIPIRNNYMYARVRK
ALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQANEIVLLEAGHEPMELLINDKVAQLP
LSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSGENLAAWHPIKPHGILILGQEQDTLGG
RFDATQAFVGDIAQFNLWDHALTPAQVLGIANCTAPLLGNVLPWEDKLVEAFGGATKAAF
DVCKGRAKA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0384 Download

>pF1KE0384  4580 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGGCGTTC
CTCGGTGCCGTCATCTGCATCATCGCCAGCGTGCCCCTGGCGGCCAGCCCGGCGCGGGCG
CTGCCCGGCGGCGCCGACAATGCTTCGGTCGCCTCGGGCGCCGCCGCGTCCCCGGGCCCG
CAGCGGAGCCTGAGCGCGCTGCACGGCGCGGGCGGTTCAGCCGGGCCCCCCGCGCTGCCC
GGGGCACCCGCGGCCAGCGCGCACCCGCTGCCGCCCGGGCCCCTGTTCAGCCGCTTCCTG
TGCACGCCGCTGGCTGCTGCCTGCCCGTCGGGGGCCCAGCAGGGGGACGCGGCGGGCGCT
GCGCCGGGCGAGCGCGAAGAGCTGCTGCTGCTGCAGAGCACGGCCGAGCAGCTGCGCCAG
ACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCATCCGTGAGCTCACC
GGCAAGCTGGGCCGCTGCGAGAGCGGCCTGCCGCGCGGCCTCCAGGGCGCCGGGCCCCGC
CGCGACACCATGGCCGACGGGCCCTGGGACTCGCCTGCGCTCATTCTGGAGCTGGAGGAC
GCCGTGCGCGCCCTGCGGGACCGCATCGACCGCCTGGAGCAGGAGCTTCCAGCCCGTGTG
AACCTCTCAGCTGCCCCAGCCCCAGTCTCTGCTGTGCCCACCGGCCTACACTCCAAGATG
GACCAGCTGGAGGGGCAGCTGCTGGCCCAGGTGCTGGCACTGGAGAAGGAGCGTGTGGCC
CTCAGCCACAGCAGCCGCCGGCAGAGGCAGGAAGTGGAAAAGGAGTTGGACGTCCTGCAG
GGTCGTGTGGCTGAGCTGGAGCACGGGTCCTCAGCCTACAGTCCTCCAGATGCCTTCAAG
ATCAGCATCCCCATCCGTAACAACTACATGTACGCCCGCGTGCGGAAGGCTCTGCCCGAG
CTCTACGCATTCACCGCCTGCATGTGGCTGCGGTCCAGGTCCAGCGGCACCGGCCAGGGC
ACCCCCTTCTCCTACTCAGTGCCCGGGCAGGCCAACGAGATTGTACTGCTAGAGGCGGGC
CATGAGCCCATGGAGCTGCTGATCAACGACAAGGTGGCCCAGCTGCCCCTGAGCCTGAAG
GACAATGGCTGGCACCACATCTGCATCGCCTGGACCACAAGGGATGGCCTATGGTCTGCC
TACCAGGACGGGGAGCTGCAGGGCTCCGGTGAGAACCTGGCTGCCTGGCACCCCATCAAG
CCTCATGGGATCCTTATCTTGGGCCAGGAGCAGGATACCCTGGGTGGCCGGTTTGATGCC
ACCCAGGCCTTTGTCGGTGACATTGCCCAGTTTAACCTGTGGGACCACGCCCTGACACCA
GCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGG
GAAGACAAGTTGGTGGAGGCCTTTGGGGGTGCAACAAAGGCTGCCTTCGATGTCTGCAAG
GGGAGGGCCAAGGCAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACG
GTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGA
CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG
ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT
TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACC
CCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGT
AAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTA
TGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTC
TTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGAT
TACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGC
TCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT