NKX3-2 ORF clone pFN21AB8956

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB8956

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Clone info.

Species

human

Clone Name

pFN21AB8956 Sequence (with vector) Restriction Map

Product ID

FHC06157

Flexi Clone PID

FXC06157

ORF Sequence

DNA sequence (999 bp)
Protein sequence (333 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463932]

Gene

KIBB8956

Symbol

NKX3-2

Alias : BAPX1, NKX3.2, NKX3B, SMMD

Description

NK3 homeobox 2

Original Clone ID

cp00991

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 999 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 333 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3410.1 2.3e-93 100.0 2 CCDS41558.1 1.2e-11 49.0 3 CCDS59095.1 3.9e-11 53.2 1 CCDS6042.1 5.1e-11 39.6 1 CCDS41575.1 6.3e-11 33.0 HMX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 228 239 PR00024 Homeobox IPR020479 243 253 PR00024 Homeobox IPR020479 253 262 PR00024 Homeobox HMMPfam IPR001356 207 263 PF00046 Homeobox HMMSmart IPR001356 206 268 SM00389 Homeobox ProfileScan IPR001356 204 264 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001180 333 602183,613330 100.0 100.0 NP_001099044 357 613380 33.0 93.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8956 Download

>KIBB8956  999 bp
ATGGCTGTGCGCGGCGCCAACACCTTGACGTCCTTCTCCATCCAGGCGATCCTCAACAAG
AAAGAGGAGCGCGGCGGGCTGGCCGCGCCAGAGGGGCGCCCGGCGCCCGGGGGCACAGCG
GCATCGGTGGCCGCGGCTCCCGCTGTCTGCTGTTGGCGGCTCTTTGGGGAGAGGGACGCG
GGCGCGTTGGGGGGCGCCGAGGACTCTCTGCTGGCGTCTCCTGCCGGTACCAGAACAGCT
GCGGGGAGGACTGCGGAGAGCCCGGAAGGCTGGGACTCGGACTCCGCGCTCAGCGAGGAG
AACGAGAGCAGGCGGCGCTGCGCGGACGCGCGGGGGGCCAGCGGGGCCGGCCTTGCGGGG
GGATCCTTGAGCCTCGGCCAGCCGGTCTGTGAGCTGGCCGCTTCCAAAGACCTAGAGGAG
GAAGCCGCGGGCCGGAGCGACAGCGAGATGTCCGCCAGCGTCTCAGGCGACCGCAGCCCA
AGGACCGAGGACGACGGTGTTGGCCCCAGAGGTGCACACGTGTCCGCGCTGTGCAGCGGG
GCCGGCGGCGGGGGCGGCAGCGGGCCGGCAGGCGTCGCGGAGGAGGAGGAGGAGCCGGCG
GCGCCCAAGCCACGCAAGAAGCGCTCGCGGGCCGCTTTCTCCCACGCGCAGGTCTTCGAG
CTGGAGCGCCGCTTTAACCACCAGCGCTACCTGTCCGGGCCCGAGCGCGCAGACCTGGCC
GCGTCGCTGAAGCTCACCGAGACGCAGGTGAAAATCTGGTTCCAGAACCGTCGCTACAAG
ACAAAGCGCCGGCAGATGGCAGCCGACCTGCTGGCCTCGGCGCCCGCCGCCAAGAAGGTG
GCCGTAAAGGTGCTGGTGCGCGACGACCAGAGACAATACCTGCCCGGCGAAGTGCTGCGG
CCACCCTCGCTTCTGCCACTGCAGCCCTCCTACTATTACCCGTACTACTGCCTCCCAGGC
TGGGCGCTCTCCACCTGCGCAGCTGCCGCAGGCACCCAG

ORF Protein

Cloned ORF protein sequence for pFN21AB8956 Download

>KIBB8956  333 aa
MAVRGANTLTSFSIQAILNKKEERGGLAAPEGRPAPGGTAASVAAAPAVCCWRLFGERDA
GALGGAEDSLLASPAGTRTAAGRTAESPEGWDSDSALSEENESRRRCADARGASGAGLAG
GSLSLGQPVCELAASKDLEEEAAGRSDSEMSASVSGDRSPRTEDDGVGPRGAHVSALCSG
AGGGGGSGPAGVAEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLA
ASLKLTETQVKIWFQNRRYKTKRRQMAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLR
PPSLLPLQPSYYYPYYCLPGWALSTCAAAAGTQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8956 Download

>pFN21AB8956  5704 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGTGCGCGGCGCCAACACCTTGACGTCCTT
CTCCATCCAGGCGATCCTCAACAAGAAAGAGGAGCGCGGCGGGCTGGCCGCGCCAGAGGG
GCGCCCGGCGCCCGGGGGCACAGCGGCATCGGTGGCCGCGGCTCCCGCTGTCTGCTGTTG
GCGGCTCTTTGGGGAGAGGGACGCGGGCGCGTTGGGGGGCGCCGAGGACTCTCTGCTGGC
GTCTCCTGCCGGTACCAGAACAGCTGCGGGGAGGACTGCGGAGAGCCCGGAAGGCTGGGA
CTCGGACTCCGCGCTCAGCGAGGAGAACGAGAGCAGGCGGCGCTGCGCGGACGCGCGGGG
GGCCAGCGGGGCCGGCCTTGCGGGGGGATCCTTGAGCCTCGGCCAGCCGGTCTGTGAGCT
GGCCGCTTCCAAAGACCTAGAGGAGGAAGCCGCGGGCCGGAGCGACAGCGAGATGTCCGC
CAGCGTCTCAGGCGACCGCAGCCCAAGGACCGAGGACGACGGTGTTGGCCCCAGAGGTGC
ACACGTGTCCGCGCTGTGCAGCGGGGCCGGCGGCGGGGGCGGCAGCGGGCCGGCAGGCGT
CGCGGAGGAGGAGGAGGAGCCGGCGGCGCCCAAGCCACGCAAGAAGCGCTCGCGGGCCGC
TTTCTCCCACGCGCAGGTCTTCGAGCTGGAGCGCCGCTTTAACCACCAGCGCTACCTGTC
CGGGCCCGAGCGCGCAGACCTGGCCGCGTCGCTGAAGCTCACCGAGACGCAGGTGAAAAT
CTGGTTCCAGAACCGTCGCTACAAGACAAAGCGCCGGCAGATGGCAGCCGACCTGCTGGC
CTCGGCGCCCGCCGCCAAGAAGGTGGCCGTAAAGGTGCTGGTGCGCGACGACCAGAGACA
ATACCTGCCCGGCGAAGTGCTGCGGCCACCCTCGCTTCTGCCACTGCAGCCCTCCTACTA
TTACCCGTACTACTGCCTCCCAGGCTGGGCGCTCTCCACCTGCGCAGCTGCCGCAGGCAC
CCAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT