UBAP1 ORF clone pFN21AB8688

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB8688

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Clone info.

Species

human

Clone Name

pFN21AB8688 Sequence (with vector) Restriction Map

Product ID

FHC02938

Flexi Clone PID

FXC02938

ORF Sequence

DNA sequence (1506 bp)
Protein sequence (502 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463329]

Gene

KIBB8688

Symbol

UBAP1

Alias : NAG20, SPG80, UAP, UBAP, UBAP-1

Description

ubiquitin associated protein 1, transcript variant 1

Original Clone ID

oc00351

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1506 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 502 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6550.1 1.6e-165 100.0 UBAP1 CCDS55303.1 1.1e-161 100.0 UBAP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition ProfileScan IPR023340 17 63 PS51497 UMA domain IPR015940 389 430 PS50030 Ubiquitin-associated/translation elongation factor EF1B IPR015940 451 498 PS50030 Ubiquitin-associated/translation elongation factor EF1B
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001164675 502 609787 100.0 100.0 NP_001164674 502 609787 100.0 100.0 XP_006716842 502 609787 100.0 100.0 XP_011516201 502 609787 100.0 100.0 XP_016870290 502 609787 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8688 Download

>KIBB8688  1506 bp
ATGGCTTCTAAGAAGTTGGGTGCAGATTTTCATGGGACTTTCAGTTACCTTGATGATGTC
CCATTTAAGACAGGAGACAAATTCAAAACACCAGCTAAAGTTGGTCTACCTATTGGCTTC
TCCTTGCCTGATTGTTTGCAGGTTGTCAGAGAAGTACAGTATGACTTCTCTTTGGAAAAG
AAAACCATTGAGTGGGCTGAAGAGATTAAGAAAATCGAAGAAGCCGAGCGGGAAGCAGAG
TGCAAAATTGCGGAAGCAGAAGCTAAAGTGAATTCTAAGAGTGGCCCAGAGGGCGATAGC
AAAATGAGCTTCTCCAAGACTCACAGTACAGCCACAATGCCACCTCCTATTAACCCCATC
CTCGCCAGCTTGCAGCACAACAGCATCCTCACACCAACTCGGGTCAGCAGTAGTGCCACG
AAACAGAAAGTTCTCAGCCCACCTCACATAAAGGCGGATTTCAATCTTGCTGACTTTGAG
TGTGAAGAAGACCCATTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAAGAGCTG
AGAAATATTCTGGTAGGAACCACTGGACCCATTATGGCTCAGTTATTGGACAATAACTTG
CCCAGGGGAGGCTCTGGGTCTGTGTTACAGGATGAGGAGGTCCTGGCATCCTTGGAACGG
GCAACCCTAGATTTCAAGCCTCTTCATAAACCCAATGGCTTTATAACCTTACCACAGTTG
GGCAACTGTGAAAAGATGTCACTGTCTTCCAAAGTGTCCCTCCCCCCTATACCTGCAGTA
AGCAATATCAAATCCCTGTCTTTCCCCAAACTTGACTCTGATGACAGCAATCAGAAGACA
GCCAAGCTGGCGAGCACTTTCCATAGCACATCCTGCCTCCGCAATGGCACGTTCCAGAAT
TCCCTAAAGCCTTCCACCCAAAGCAGTGCCAGTGAGCTCAATGGGCATCACACTCTTGGG
CTTTCAGCTTTGAACTTGGACAGTGGCACAGAGATGCCAGCCCTGACATCCTCCCAGATG
CCTTCCCTCTCTGTTTTGTCTGTGTGCACAGAGGAATCATCACCTCCAAATACTGGTCCC
ACGGTCACCCCTCCTAATTTCTCAGTGTCACAAGTGCCCAACATGCCCAGCTGTCCCCAG
GCCTATTCTGAACTGCAGATGCTGTCCCCCAGCGAGCGGCAGTGTGTGGAGACGGTGGTC
AACATGGGCTACTCGTACGAGTGTGTCCTCAGAGCCATGAAGAAGAAAGGAGAGAATATT
GAGCAGATTCTCGACTATCTCTTTGCACATGGACAGCTTTGTGAGAAGGGCTTCGACCCT
CTTTTAGTGGAAGAGGCTCTGGAAATGCACCAGTGTTCAGAAGAAAAGATGATGGAGTTT
CTTCAGTTAATGAGCAAATTTAAGGAGATGGGCTTTGAGCTGAAAGACATTAAGGAAGTT
TTGCTATTACACAACAATGACCAGGACAATGCTTTGGAAGACCTCATGGCTCGGGCAGGA
GCCAGC

ORF Protein

Cloned ORF protein sequence for pFN21AB8688 Download

>KIBB8688  502 aa
MASKKLGADFHGTFSYLDDVPFKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEK
KTIEWAEEIKKIEEAEREAECKIAEAEAKVNSKSGPEGDSKMSFSKTHSTATMPPPINPI
LASLQHNSILTPTRVSSSATKQKVLSPPHIKADFNLADFECEEDPFDNLELKTIDEKEEL
RNILVGTTGPIMAQLLDNNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFITLPQL
GNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSNQKTAKLASTFHSTSCLRNGTFQN
SLKPSTQSSASELNGHHTLGLSALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGP
TVTPPNFSVSQVPNMPSCPQAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENI
EQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEV
LLLHNNDQDNALEDLMARAGAS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8688 Download

>pFN21AB8688  6211 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTTCTAAGAAGTTGGGTGCAGATTTTCATGG
GACTTTCAGTTACCTTGATGATGTCCCATTTAAGACAGGAGACAAATTCAAAACACCAGC
TAAAGTTGGTCTACCTATTGGCTTCTCCTTGCCTGATTGTTTGCAGGTTGTCAGAGAAGT
ACAGTATGACTTCTCTTTGGAAAAGAAAACCATTGAGTGGGCTGAAGAGATTAAGAAAAT
CGAAGAAGCCGAGCGGGAAGCAGAGTGCAAAATTGCGGAAGCAGAAGCTAAAGTGAATTC
TAAGAGTGGCCCAGAGGGCGATAGCAAAATGAGCTTCTCCAAGACTCACAGTACAGCCAC
AATGCCACCTCCTATTAACCCCATCCTCGCCAGCTTGCAGCACAACAGCATCCTCACACC
AACTCGGGTCAGCAGTAGTGCCACGAAACAGAAAGTTCTCAGCCCACCTCACATAAAGGC
GGATTTCAATCTTGCTGACTTTGAGTGTGAAGAAGACCCATTTGATAATCTGGAGTTAAA
AACTATTGATGAGAAGGAAGAGCTGAGAAATATTCTGGTAGGAACCACTGGACCCATTAT
GGCTCAGTTATTGGACAATAACTTGCCCAGGGGAGGCTCTGGGTCTGTGTTACAGGATGA
GGAGGTCCTGGCATCCTTGGAACGGGCAACCCTAGATTTCAAGCCTCTTCATAAACCCAA
TGGCTTTATAACCTTACCACAGTTGGGCAACTGTGAAAAGATGTCACTGTCTTCCAAAGT
GTCCCTCCCCCCTATACCTGCAGTAAGCAATATCAAATCCCTGTCTTTCCCCAAACTTGA
CTCTGATGACAGCAATCAGAAGACAGCCAAGCTGGCGAGCACTTTCCATAGCACATCCTG
CCTCCGCAATGGCACGTTCCAGAATTCCCTAAAGCCTTCCACCCAAAGCAGTGCCAGTGA
GCTCAATGGGCATCACACTCTTGGGCTTTCAGCTTTGAACTTGGACAGTGGCACAGAGAT
GCCAGCCCTGACATCCTCCCAGATGCCTTCCCTCTCTGTTTTGTCTGTGTGCACAGAGGA
ATCATCACCTCCAAATACTGGTCCCACGGTCACCCCTCCTAATTTCTCAGTGTCACAAGT
GCCCAACATGCCCAGCTGTCCCCAGGCCTATTCTGAACTGCAGATGCTGTCCCCCAGCGA
GCGGCAGTGTGTGGAGACGGTGGTCAACATGGGCTACTCGTACGAGTGTGTCCTCAGAGC
CATGAAGAAGAAAGGAGAGAATATTGAGCAGATTCTCGACTATCTCTTTGCACATGGACA
GCTTTGTGAGAAGGGCTTCGACCCTCTTTTAGTGGAAGAGGCTCTGGAAATGCACCAGTG
TTCAGAAGAAAAGATGATGGAGTTTCTTCAGTTAATGAGCAAATTTAAGGAGATGGGCTT
TGAGCTGAAAGACATTAAGGAAGTTTTGCTATTACACAACAATGACCAGGACAATGCTTT
GGAAGACCTCATGGCTCGGGCAGGAGCCAGCGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT