ZSCAN21 ORF clone pFN21AB8295

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Halotag ORF Clone pFN21AB8295

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Clone info.

Species

human

Clone Name

pFN21AB8295 Sequence (with vector) Restriction Map

Product ID

FHC02732

Flexi Clone PID

FXC02732

ORF Sequence

DNA sequence (1419 bp)
Protein sequence (473 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464370]

Gene

KIBB8295

Symbol

ZSCAN21

Alias : NY-REN-21, ZNF38, Zipro1

Description

zinc finger and SCAN domain containing 21

Original Clone ID

oc00071

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1419 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 473 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5681.1 2.1e-120 100.0 ZSCAN21 CCDS42427.1 1.4e-46 46.2 ZSCAN30 CCDS78119.1 6.6e-37 43.4 ZSCAN26 CCDS4643.1 9.5e-37 42.1 ZNF165 CCDS14649.1 6.1e-31 40.2 ZNF449 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 40 133 PF02023 Transcription regulator SCAN IPR007087 277 299 PF00096 Zinc finger IPR007087 305 327 PF00096 Zinc finger IPR007087 360 382 PF00096 Zinc finger IPR007087 388 410 PF00096 Zinc finger IPR007087 416 438 PF00096 Zinc finger HMMSmart IPR003309 41 153 SM00431 Transcription regulator SCAN IPR015880 277 299 SM00355 Zinc finger IPR015880 305 327 SM00355 Zinc finger IPR015880 333 354 SM00355 Zinc finger IPR015880 360 382 SM00355 Zinc finger IPR015880 388 410 SM00355 Zinc finger IPR015880 416 438 SM00355 Zinc finger IPR015880 444 466 SM00355 Zinc finger ProfileScan IPR003309 45 127 PS50804 Transcription regulator SCAN IPR007087 277 304 PS50157 Zinc finger IPR007087 305 332 PS50157 Zinc finger IPR007087 333 359 PS50157 Zinc finger IPR007087 360 387 PS50157 Zinc finger IPR007087 388 415 PS50157 Zinc finger IPR007087 416 443 PS50157 Zinc finger IPR007087 444 471 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005250625 473 601261 100.0 100.0 NP_666019 473 601261 100.0 100.0 XP_006716176 473 601261 100.0 100.0 XP_016868073 473 601261 100.0 100.0 XP_016866753 478 616474 43.4 89.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8295 Download

>KIBB8295  1419 bp
ATGATGACCAAGGTACTAGGCATGGCCCCAGTTCTGGGCCCTAGGCCTCCACAGGAGCAG
GTGGGGCCTCTGATGGTAAAAGTCGAGGAGAAAGAAGAGAAAGGCAAGTACCTTCCTAGC
CTGGAGATGTTCCGCCAGCGCTTCAGGCAGTTTGGGTACCATGATACCCCTGGACCCCGA
GAGGCCCTGAGCCAACTCCGGGTGCTCTGCTGTGAGTGGCTGAGGCCCGAGATCCACACC
AAGGAGCAGATCCTGGAGCTACTGGTGCTGGAGCAGTTCCTGACCATCCTGCCCCAGGAG
CTCCAGGCCTGGGTGCAGGAGCATTGCCCGGAGAGCGCTGAAGAGGCTGTCACTCTCCTC
GAAGATCTGGAGCGGGAACTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAA
CAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGC
ATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATC
CAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATTGCAGA
TTGAGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGCAGAGGGGCTC
AAAGGGGATATAATTTCTGTGATTATCGCCAATAAACCTGAGGCCAGCTTAGAGAGGCAG
TGCGTAAACCTTGAAAATGAAAAAGGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAAG
AAAGGTAGAGAATCAGTTCCTACTAAACCTACCCCAGGAGAGAGACGTTATATATGTGCT
GAATGTGGCAAAGCCTTTAGTAATAGCTCAAATCTCACCAAACACAGGAGAACACACACT
GGGGAGAAACCTTACGTGTGCACCAAGTGTGGGAAAGCTTTCAGCCACAGCTCAAACCTC
ACCCTCCACTACAGAACACACTTGGTGGACCGGCCCTATGACTGTAAGTGTGGAAAAGCT
TTTGGGCAGAGCTCAGACCTTCTTAAACATCAGAGAATGCACACAGAAGAGGCGCCATAT
CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCGG
ATCCACACTGGGGAGAAGCCTTATCAGTGTAACGAATGTGGGAAGAGCTTCAGTCAGCAT
GCGGGCCTCAGCTCCCACCAGAGACTCCACACCGGAGAGAAGCCATATAAGTGTAAGGAG
TGTGGGAAAGCCTTCAACCACAGCTCCAACTTCAATAAACACCACAGAATCCACACCGGG
GAAAAGCCCTACTGGTGTCATCACTGTGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCC
AAACATCAGCGAGTCCACACTGGAGAGGGAGAAGCACCG

ORF Protein

Cloned ORF protein sequence for pFN21AB8295 Download

>KIBB8295  473 aa
MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8295 Download

>pFN21AB8295  6124 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATGACCAAGGTACTAGGCATGGCCCCAGTTCT
GGGCCCTAGGCCTCCACAGGAGCAGGTGGGGCCTCTGATGGTAAAAGTCGAGGAGAAAGA
AGAGAAAGGCAAGTACCTTCCTAGCCTGGAGATGTTCCGCCAGCGCTTCAGGCAGTTTGG
GTACCATGATACCCCTGGACCCCGAGAGGCCCTGAGCCAACTCCGGGTGCTCTGCTGTGA
GTGGCTGAGGCCCGAGATCCACACCAAGGAGCAGATCCTGGAGCTACTGGTGCTGGAGCA
GTTCCTGACCATCCTGCCCCAGGAGCTCCAGGCCTGGGTGCAGGAGCATTGCCCGGAGAG
CGCTGAAGAGGCTGTCACTCTCCTCGAAGATCTGGAGCGGGAACTGGATGAGCCAGGACA
CCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGG
AACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTCACAAATA
CGAGTCTTGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGA
TCCAAGAAAGGTCCGAGATTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGATGAGCA
GAAAGGTTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTTCTGTGATTATCGCCAATAA
ACCTGAGGCCAGCTTAGAGAGGCAGTGCGTAAACCTTGAAAATGAAAAAGGAACAAAACC
CCCTCTTCAAGAGGCAGGCTCCAAGAAAGGTAGAGAATCAGTTCCTACTAAACCTACCCC
AGGAGAGAGACGTTATATATGTGCTGAATGTGGCAAAGCCTTTAGTAATAGCTCAAATCT
CACCAAACACAGGAGAACACACACTGGGGAGAAACCTTACGTGTGCACCAAGTGTGGGAA
AGCTTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGGCC
CTATGACTGTAAGTGTGGAAAAGCTTTTGGGCAGAGCTCAGACCTTCTTAAACATCAGAG
AATGCACACAGAAGAGGCGCCATATCAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAA
AGGCAGCCTCATTCGTCACTATCGGATCCACACTGGGGAGAAGCCTTATCAGTGTAACGA
ATGTGGGAAGAGCTTCAGTCAGCATGCGGGCCTCAGCTCCCACCAGAGACTCCACACCGG
AGAGAAGCCATATAAGTGTAAGGAGTGTGGGAAAGCCTTCAACCACAGCTCCAACTTCAA
TAAACACCACAGAATCCACACCGGGGAAAAGCCCTACTGGTGTCATCACTGTGGAAAGAC
CTTCTGTAGCAAGTCCAATCTTTCCAAACATCAGCGAGTCCACACTGGAGAGGGAGAAGC
ACCGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT