Result of FASTA (omim) for
pFN21AB8295
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8295, 473 aa
1>>>pF1KB8295 473 - 473 aa - 473 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2152+/-0.000383; mu= 10.8534+/- 0.024
mean_var=257.2641+/-54.047, 0's: 0 Z-trim(120.3): 1953 B-trim: 127 in 1/58
Lambda= 0.079962
statistics sampled from 33124 (35416) to 33124 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.415), width: 16
Scan time: 5.980
The best scores are: opt bits E(85289)
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 3321 396.6 7.8e-110
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 3321 396.6 7.8e-110
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 3321 396.6 7.8e-110
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 3321 396.6 7.8e-110
XP_016868074 (OMIM: 601261) PREDICTED: zinc finger ( 450) 1784 219.3 1.8e-56
XP_016866753 (OMIM: 616474) PREDICTED: zinc finger ( 478) 1114 142.0 3.4e-33
NP_001104509 (OMIM: 616474) zinc finger and SCAN d ( 478) 1114 142.0 3.4e-33
XP_016866748 (OMIM: 600834) PREDICTED: zinc finger ( 485) 1110 141.6 4.8e-33
XP_016866747 (OMIM: 600834) PREDICTED: zinc finger ( 485) 1110 141.6 4.8e-33
XP_016866749 (OMIM: 600834) PREDICTED: zinc finger ( 485) 1110 141.6 4.8e-33
NP_003438 (OMIM: 600834) zinc finger protein 165 [ ( 485) 1110 141.6 4.8e-33
XP_011513177 (OMIM: 602246) PREDICTED: zinc finger ( 583) 998 128.8 4.1e-29
NP_689908 (OMIM: 300627) zinc finger protein 449 [ ( 518) 957 123.9 1e-27
XP_011529614 (OMIM: 300627) PREDICTED: zinc finger ( 518) 957 123.9 1e-27
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 958 124.2 1e-27
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 958 124.2 1e-27
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 958 124.2 1e-27
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 958 124.2 1.1e-27
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 958 124.2 1.1e-27
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 958 124.2 1.1e-27
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 958 124.2 1.1e-27
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 958 124.2 1.1e-27
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 958 124.2 1.1e-27
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 958 124.2 1.1e-27
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 932 120.9 6.4e-27
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 932 120.9 6.4e-27
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 932 120.9 6.4e-27
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 932 120.9 6.4e-27
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 932 121.1 8e-27
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 932 121.1 8e-27
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 932 121.1 8e-27
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 932 121.1 8e-27
XP_016885222 (OMIM: 300573) PREDICTED: zinc finger ( 513) 925 120.3 1.3e-26
XP_016885221 (OMIM: 300573) PREDICTED: zinc finger ( 513) 925 120.3 1.3e-26
XP_011542247 (OMIM: 300573) PREDICTED: zinc finger ( 514) 925 120.3 1.3e-26
XP_016885219 (OMIM: 300573) PREDICTED: zinc finger ( 514) 925 120.3 1.3e-26
XP_016885220 (OMIM: 300573) PREDICTED: zinc finger ( 514) 925 120.3 1.3e-26
XP_016885217 (OMIM: 300573) PREDICTED: zinc finger ( 514) 925 120.3 1.3e-26
XP_016885218 (OMIM: 300573) PREDICTED: zinc finger ( 514) 925 120.3 1.3e-26
XP_011542246 (OMIM: 300573) PREDICTED: zinc finger ( 545) 925 120.3 1.4e-26
NP_001139763 (OMIM: 300573) zinc finger protein 67 ( 575) 925 120.3 1.4e-26
NP_001177346 (OMIM: 300573) zinc finger protein 67 ( 576) 925 120.3 1.4e-26
XP_011542245 (OMIM: 300573) PREDICTED: zinc finger ( 580) 925 120.3 1.4e-26
NP_001034980 (OMIM: 300573) zinc finger protein 67 ( 581) 925 120.3 1.4e-26
XP_011542243 (OMIM: 300573) PREDICTED: zinc finger ( 581) 925 120.3 1.4e-26
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 921 119.6 1.5e-26
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 921 119.7 1.7e-26
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 921 119.7 1.7e-26
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 921 119.7 1.7e-26
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 921 119.7 1.7e-26
>>XP_005250625 (OMIM: 601261) PREDICTED: zinc finger and (473 aa)
initn: 3321 init1: 3321 opt: 3321 Z-score: 2092.9 bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)
10 20 30 40 50 60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
430 440 450 460 470
>>NP_666019 (OMIM: 601261) zinc finger and SCAN domain-c (473 aa)
initn: 3321 init1: 3321 opt: 3321 Z-score: 2092.9 bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)
10 20 30 40 50 60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
430 440 450 460 470
>>XP_006716176 (OMIM: 601261) PREDICTED: zinc finger and (473 aa)
initn: 3321 init1: 3321 opt: 3321 Z-score: 2092.9 bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)
10 20 30 40 50 60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
430 440 450 460 470
>>XP_016868073 (OMIM: 601261) PREDICTED: zinc finger and (473 aa)
initn: 3321 init1: 3321 opt: 3321 Z-score: 2092.9 bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)
10 20 30 40 50 60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
430 440 450 460 470
>>XP_016868074 (OMIM: 601261) PREDICTED: zinc finger and (450 aa)
initn: 1778 init1: 1778 opt: 1784 Z-score: 1134.9 bits: 219.3 E(85289): 1.8e-56
Smith-Waterman score: 1784; 89.3% identity (92.3% similar) in 300 aa overlap (1-300:1-293)
10 20 30 40 50 60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
::::::::::::::::::::::.... : :: .: ... . ::
XP_016 CVNLENEKGTKPPLQEAGSKKGEHTLG-------RNLTCAPSVGKLSATAQTSPSTTEHT
250 260 270 280 290
310 320 330 340 350 360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
XP_016 WWTGPMTVSVEKLLGRAQTFLNIRECTQKRRHISAKIVARLSAGKAASFVTIGSTLGRSL
300 310 320 330 340 350
>>XP_016866753 (OMIM: 616474) PREDICTED: zinc finger and (478 aa)
initn: 1611 init1: 704 opt: 1114 Z-score: 716.9 bits: 142.0 E(85289): 3.4e-33
Smith-Waterman score: 1137; 43.4% identity (67.6% similar) in 438 aa overlap (46-466:52-472)
20 30 40 50 60 70
pF1KB8 PPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPREALSQLRVLCCEWLR
..:::. :..: :::::::.:: :: .::.
XP_016 RVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYEETTGPREALSRLRELCQQWLQ
30 40 50 60 70 80
80 90 100 110 120 130
pF1KB8 PEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLEDLERELDEPGHQVS
:: :::::::::::::::: :::.:::: :::: ::: :..:..::::. .: : :.:
XP_016 PETHTKEQILELLVLEQFLIILPKELQARVQEHHPESREDVVVVLEDLQLDLGETGQQDP
90 100 110 120 130 140
140 150 160 170 180 190
pF1KB8 TPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYIQESGEEQEFAQDPRK
:..:: . :... ...: : .. :. : : .:.::: .. .
XP_016 DQPKKQKILVEEMAPL-------KGVQEQ--QVRHECEVTKPE--KEKGEETRIENGKLI
150 160 170 180 190
200 210 220 230 240 250
pF1KB8 V--RDC-RLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQCVNLENEKGTKP
: .: :. .. . : . .:. .:. ::. ..: .: . :.. .
XP_016 VVTDSCGRVESSGKISEPMEAHNEGSNLERH------QAKPKEKIEYKCSEREQRFIQHL
200 210 220 230 240
260 270 280 290
pF1KB8 PLQE-AGSKKGR---ES--VPTKPTPGERRYI-------CAECGKAFSNSSNLTKHRRTH
: : :... :. :: .. :... . : ::::::. ::.:..:.. :
XP_016 DLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIH
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 TGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-KCGKAFGQSSDLLKHQRMHTEEA
::::: :..:::.::....: : : : ..:: : .::: : .:: : .:::.:..:
XP_016 LGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 PYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKC
: .::.:::.:: : .: :::. : .:::::::.:: . : :.:.::::::.::
XP_016 PCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 KECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
. : ::: .:.. .: :::. :::: : .::..: ..:.: .::: :
XP_016 NICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
430 440 450 460 470
>>NP_001104509 (OMIM: 616474) zinc finger and SCAN domai (478 aa)
initn: 1611 init1: 704 opt: 1114 Z-score: 716.9 bits: 142.0 E(85289): 3.4e-33
Smith-Waterman score: 1137; 43.4% identity (67.6% similar) in 438 aa overlap (46-466:52-472)
20 30 40 50 60 70
pF1KB8 PPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPREALSQLRVLCCEWLR
..:::. :..: :::::::.:: :: .::.
NP_001 RVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYEETTGPREALSRLRELCQQWLQ
30 40 50 60 70 80
80 90 100 110 120 130
pF1KB8 PEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLEDLERELDEPGHQVS
:: :::::::::::::::: :::.:::: :::: ::: :..:..::::. .: : :.:
NP_001 PETHTKEQILELLVLEQFLIILPKELQARVQEHHPESREDVVVVLEDLQLDLGETGQQDP
90 100 110 120 130 140
140 150 160 170 180 190
pF1KB8 TPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYIQESGEEQEFAQDPRK
:..:: . :... ...: : .. :. : : .:.::: .. .
NP_001 DQPKKQKILVEEMAPL-------KGVQEQ--QVRHECEVTKPE--KEKGEETRIENGKLI
150 160 170 180 190
200 210 220 230 240 250
pF1KB8 V--RDC-RLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQCVNLENEKGTKP
: .: :. .. . : . .:. .:. ::. ..: .: . :.. .
NP_001 VVTDSCGRVESSGKISEPMEAHNEGSNLERH------QAKPKEKIEYKCSEREQRFIQHL
200 210 220 230 240
260 270 280 290
pF1KB8 PLQE-AGSKKGR---ES--VPTKPTPGERRYI-------CAECGKAFSNSSNLTKHRRTH
: : :... :. :: .. :... . : ::::::. ::.:..:.. :
NP_001 DLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIH
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 TGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-KCGKAFGQSSDLLKHQRMHTEEA
::::: :..:::.::....: : : : ..:: : .::: : .:: : .:::.:..:
NP_001 LGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 PYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKC
: .::.:::.:: : .: :::. : .:::::::.:: . : :.:.::::::.::
NP_001 PCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 KECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
. : ::: .:.. .: :::. :::: : .::..: ..:.: .::: :
NP_001 NICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA
430 440 450 460 470
>>XP_016866748 (OMIM: 600834) PREDICTED: zinc finger pro (485 aa)
initn: 1812 init1: 587 opt: 1110 Z-score: 714.3 bits: 141.6 E(85289): 4.8e-33
Smith-Waterman score: 1169; 42.1% identity (68.0% similar) in 478 aa overlap (17-469:14-481)
10 20 30 40 50
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
:... : :.::.::.: .... : . :. :: ::::
XP_016 MATEPKKAAAQNSPEDE-GLLIVKIEEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
XP_016 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
120 130 140 150 160 170
180 190 200 210 220
pF1KB8 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISVII
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
XP_016 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
180 190 200 210 220 230
230 240 250 260 270
pF1KB8 ANK---PEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
: . : : : .. ...: : . .. .: : .. .. ..
XP_016 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
. : ..:. .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
XP_016 CKHGTCDQSFKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
300 310 320 330 340
340 350 360 370 380 390
pF1KB8 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
.::::: .:: : .:::.:: : :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 ECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
XP_016 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
410 420 430 440 450 460
460 470
pF1KB8 KSNLSKHQRVHTGEGEAP
.::::.:::.: :
XP_016 SSNLSQHQRIHMRENLLM
470 480
>>XP_016866747 (OMIM: 600834) PREDICTED: zinc finger pro (485 aa)
initn: 1812 init1: 587 opt: 1110 Z-score: 714.3 bits: 141.6 E(85289): 4.8e-33
Smith-Waterman score: 1169; 42.1% identity (68.0% similar) in 478 aa overlap (17-469:14-481)
10 20 30 40 50
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
:... : :.::.::.: .... : . :. :: ::::
XP_016 MATEPKKAAAQNSPEDE-GLLIVKIEEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
XP_016 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
120 130 140 150 160 170
180 190 200 210 220
pF1KB8 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISVII
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
XP_016 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
180 190 200 210 220 230
230 240 250 260 270
pF1KB8 ANK---PEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
: . : : : .. ...: : . .. .: : .. .. ..
XP_016 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
. : ..:. .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
XP_016 CKHGTCDQSFKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
300 310 320 330 340
340 350 360 370 380 390
pF1KB8 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
.::::: .:: : .:::.:: : :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 ECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
XP_016 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
410 420 430 440 450 460
460 470
pF1KB8 KSNLSKHQRVHTGEGEAP
.::::.:::.: :
XP_016 SSNLSQHQRIHMRENLLM
470 480
>>XP_016866749 (OMIM: 600834) PREDICTED: zinc finger pro (485 aa)
initn: 1812 init1: 587 opt: 1110 Z-score: 714.3 bits: 141.6 E(85289): 4.8e-33
Smith-Waterman score: 1169; 42.1% identity (68.0% similar) in 478 aa overlap (17-469:14-481)
10 20 30 40 50
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
:... : :.::.::.: .... : . :. :: ::::
XP_016 MATEPKKAAAQNSPEDE-GLLIVKIEEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
XP_016 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
120 130 140 150 160 170
180 190 200 210 220
pF1KB8 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISVII
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
XP_016 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
180 190 200 210 220 230
230 240 250 260 270
pF1KB8 ANK---PEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
: . : : : .. ...: : . .. .: : .. .. ..
XP_016 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
. : ..:. .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
XP_016 CKHGTCDQSFKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
300 310 320 330 340
340 350 360 370 380 390
pF1KB8 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
.::::: .:: : .:::.:: : :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 ECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
XP_016 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
410 420 430 440 450 460
460 470
pF1KB8 KSNLSKHQRVHTGEGEAP
.::::.:::.: :
XP_016 SSNLSQHQRIHMRENLLM
470 480
473 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:28:58 2016 done: Fri Nov 4 11:28:59 2016
Total Scan time: 5.980 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]