ZNF550 ORF clone pFN21AB8287

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Halotag ORF Clone pFN21AB8287

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Clone info.

Species

human

Clone Name

pFN21AB8287 Sequence (with vector) Restriction Map

Product ID

FHC10804

ORF Sequence

DNA sequence (1266 bp)
Protein sequence (422 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590451]

Gene

KIBB8287

Symbol

ZNF550

Description

zinc finger protein 550, transcript variant 1

Original Clone ID

cp00647

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1266 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 422 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35500.2 3.7e-96 100.0 ZNF550 CCDS46207.1 4.9e-55 58.6 ZNF805 CCDS32991.1 6.8e-54 59.6 ZNF599 CCDS33127.1 9.5e-53 56.9 ZNF264 CCDS46208.1 6.4e-39 58.5 ZNF805 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 12 52 PF01352 Krueppel-associated box IPR007087 203 225 PF00096 Zinc finger IPR007087 231 253 PF00096 Zinc finger IPR007087 399 421 PF00096 Zinc finger HMMSmart IPR001909 12 72 SM00349 Krueppel-associated box IPR015880 203 225 SM00355 Zinc finger IPR015880 231 253 SM00355 Zinc finger IPR015880 259 281 SM00355 Zinc finger IPR015880 287 309 SM00355 Zinc finger IPR015880 315 337 SM00355 Zinc finger IPR015880 343 365 SM00355 Zinc finger IPR015880 371 393 SM00355 Zinc finger IPR015880 399 421 SM00355 Zinc finger ProfileScan IPR001909 12 83 PS50805 Krueppel-associated box IPR007087 203 230 PS50157 Zinc finger IPR007087 231 258 PS50157 Zinc finger IPR007087 259 286 PS50157 Zinc finger IPR007087 287 314 PS50157 Zinc finger IPR007087 315 342 PS50157 Zinc finger IPR007087 343 370 PS50157 Zinc finger IPR007087 371 398 PS50157 Zinc finger IPR007087 399 422 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003408 627 604668 56.9 98.8 XP_011525824 595 604668 52.6 98.8 NP_003437 506 300024 43.2 97.4 NP_003432 474 194648,615226 43.4 97.6 XP_016864080 534 194648,615226 43.4 97.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8287 Download

>KIBB8287  1266 bp
ATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGTGACCTTCAAGGATGTGGCTGTGACC
TTTACCCGGGAGGAGTGGAGACAGCTGGACCTGGCCCAGAGGACCCTGTACCGAGAGGTG
ATGCTGGAGACCTGTGGGCTTCTGGTTTCACTAGGGCATCGGGTTCCCAAACCAGAGTTG
GTCCACCTGCTAGAGCATGGGCAGGAGCTGTGGATAGTGAAGAGAGGCCTCTCACATGCT
ACCTGTGCAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTC
TTATCTGAGCGGGCCTTTCTCCGGGGAAGCCTGACTCTGGAATCTTCAACCTCAAGTGAT
TCGAGGTTGGGGAGAGCTAGGGATGAGGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTG
ACACCGGAGACAGACCTCCACAAGGAGACCCATCTTGGGAAAGTGAGCCTTGAAGGTGAA
GGTTTGGGGACAGATGATGGTCTGCACTCCAGGGCATTACAAGAGTGGTTATCAGCAGAT
GTTCTCCATGAATGTGACTCACAGCAACCAGGGAAAGACGCCTTGATTCATGCAGGGACA
AACCCCTACAAATGCAAGCAGTGTGGGAAAGGTTTTAACAGGAAGTGGTATCTTGTTCGA
CATCAGAGGGTTCACACTGGAATGAAACCCTATGAATGCAATGCATGTGGGAAAGCCTTT
AGCCAGAGCTCAACTCTCATTCGGCACTACCTCATCCACACCGGGGAGAAACCATACAAG
TGCCTTGAGTGTGGGAAGGCCTTCAAACGCAGGTCGTACCTCATGCAGCACCATCCAATC
CACACTGGAGAGAAACCCTATGAGTGTAGTCAGTGTCGAAAGGCCTTCACCCACCGGTCT
ACTTTTATTCGCCATAATAGGACCCACACTGGAGAAAAGCCCTTTGAGTGCAAAGAATGT
GAGAAAGCCTTTAGCAATAGAGCCCACCTAATTCAACATTACATCATCCACACTGGAGAG
AAGCCCTATGATTGCATGGCATGTGGAAAGGCCTTCAGATGCAGCTCAGAACTCATACAG
CACCAGCGGATTCACACTGGGGAGAAGCCCTATGAATGCACCCAGTGTGGGAAAGCCTTT
CACCGGAGCACGTACCTCATTCAGCACTCTGTCATCCACACTGGGGAGATGCCCTACAAG
TGTATCGAGTGTGGGAAGGCCTTCAAACGCAGGTCACACCTTCTGCAGCACCAAAGGGTC
CATACA

ORF Protein

Cloned ORF protein sequence for pFN21AB8287 Download

>KIBB8287  422 aa
MAETKDAAQMLVTFKDVAVTFTREEWRQLDLAQRTLYREVMLETCGLLVSLGHRVPKPEL
VHLLEHGQELWIVKRGLSHATCAGDRAQVHTREPTTYPPVLSERAFLRGSLTLESSTSSD
SRLGRARDEEGLLEMQKGKVTPETDLHKETHLGKVSLEGEGLGTDDGLHSRALQEWLSAD
VLHECDSQQPGKDALIHAGTNPYKCKQCGKGFNRKWYLVRHQRVHTGMKPYECNACGKAF
SQSSTLIRHYLIHTGEKPYKCLECGKAFKRRSYLMQHHPIHTGEKPYECSQCRKAFTHRS
TFIRHNRTHTGEKPFECKECEKAFSNRAHLIQHYIIHTGEKPYDCMACGKAFRCSSELIQ
HQRIHTGEKPYECTQCGKAFHRSTYLIQHSVIHTGEMPYKCIECGKAFKRRSHLLQHQRV
HT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8287 Download

>pFN21AB8287  5971 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGT
GACCTTCAAGGATGTGGCTGTGACCTTTACCCGGGAGGAGTGGAGACAGCTGGACCTGGC
CCAGAGGACCCTGTACCGAGAGGTGATGCTGGAGACCTGTGGGCTTCTGGTTTCACTAGG
GCATCGGGTTCCCAAACCAGAGTTGGTCCACCTGCTAGAGCATGGGCAGGAGCTGTGGAT
AGTGAAGAGAGGCCTCTCACATGCTACCTGTGCAGGTGACAGAGCACAAGTTCATACCAG
AGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTCTCCGGGGAAGCCTGAC
TCTGGAATCTTCAACCTCAAGTGATTCGAGGTTGGGGAGAGCTAGGGATGAGGAAGGGCT
TTTGGAAATGCAGAAAGGTAAAGTGACACCGGAGACAGACCTCCACAAGGAGACCCATCT
TGGGAAAGTGAGCCTTGAAGGTGAAGGTTTGGGGACAGATGATGGTCTGCACTCCAGGGC
ATTACAAGAGTGGTTATCAGCAGATGTTCTCCATGAATGTGACTCACAGCAACCAGGGAA
AGACGCCTTGATTCATGCAGGGACAAACCCCTACAAATGCAAGCAGTGTGGGAAAGGTTT
TAACAGGAAGTGGTATCTTGTTCGACATCAGAGGGTTCACACTGGAATGAAACCCTATGA
ATGCAATGCATGTGGGAAAGCCTTTAGCCAGAGCTCAACTCTCATTCGGCACTACCTCAT
CCACACCGGGGAGAAACCATACAAGTGCCTTGAGTGTGGGAAGGCCTTCAAACGCAGGTC
GTACCTCATGCAGCACCATCCAATCCACACTGGAGAGAAACCCTATGAGTGTAGTCAGTG
TCGAAAGGCCTTCACCCACCGGTCTACTTTTATTCGCCATAATAGGACCCACACTGGAGA
AAAGCCCTTTGAGTGCAAAGAATGTGAGAAAGCCTTTAGCAATAGAGCCCACCTAATTCA
ACATTACATCATCCACACTGGAGAGAAGCCCTATGATTGCATGGCATGTGGAAAGGCCTT
CAGATGCAGCTCAGAACTCATACAGCACCAGCGGATTCACACTGGGGAGAAGCCCTATGA
ATGCACCCAGTGTGGGAAAGCCTTTCACCGGAGCACGTACCTCATTCAGCACTCTGTCAT
CCACACTGGGGAGATGCCCTACAAGTGTATCGAGTGTGGGAAGGCCTTCAAACGCAGGTC
ACACCTTCTGCAGCACCAAAGGGTCCATACAGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT