PRDM14 ORF clone pFN21AB7877

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7877

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Clone info.

Species

human

Clone Name

pFN21AB7877 Sequence (with vector) Restriction Map

Product ID

FHC16539

ORF Sequence

DNA sequence (1713 bp)
Protein sequence (571 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB7877

Symbol

PRDM14

Alias : PFM11

Description

PR domain containing 14

Original Clone ID

cs00377

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1713 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 571 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6206.1 5.3e-133 99.8 PRDM14 CCDS9115.1 4.3e-14 30.0 PRDM4 CCDS74279.1 3.6e-12 34.6 ZNF426 CCDS12215.1 3.8e-12 34.6 ZNF426 CCDS13812.1 1.5e-11 35.9 ZNF70 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001214 266 367 PF00856 SET domain IPR007087 461 483 PF00096 Zinc finger HMMSmart IPR001214 251 373 SM00317 SET domain IPR015880 400 420 SM00355 Zinc finger IPR015880 432 455 SM00355 Zinc finger IPR015880 461 483 SM00355 Zinc finger IPR015880 489 511 SM00355 Zinc finger IPR015880 517 540 SM00355 Zinc finger IPR015880 546 568 SM00355 Zinc finger ProfileScan IPR001214 266 371 PS50280 SET domain IPR007087 400 431 PS50157 Zinc finger IPR007087 432 460 PS50157 Zinc finger IPR007087 461 488 PS50157 Zinc finger IPR007087 489 516 PS50157 Zinc finger IPR007087 517 545 PS50157 Zinc finger IPR007087 546 571 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_078780 571 611781 99.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7877 Download

>KIBB7877  1713 bp
ATGGCTCTACCCCGGCCAAGTGAGGCCGTGCCTCAGGACAAGGTGTGCTACCCGCCGGAG
AGCAGCCCGCAGAACCTGGCCGCGTACTACACGCCTTTCCCGTCCTATGGACACTACAGA
AACAGCCTGGCCACCGTGGAGGAAGACTTCCAACCTTTCCGGCAGCTGGAGGCCGCAGCG
TCTGCTGCCCCCGCCATGCCCCCCTTCCCCTTCCGGATGGCGCCTCCCTTGCTGAGCCCG
GGTCTGGGCCTACAGAGGGAGCCTCTCTACGATCTGCCCTGGTACAGCAAGCTGCCACCG
TGGTACCCAATTCCCCACGTCCCCAGGGAAGTGCCGCCCTTCCTGAGCAGCAGCCACGAG
TACGCGGGTGCCAGCAGTGAAGATCTGGGCCACCAAATCATTGGTGGCGACAACGAGAGT
GGCCCGTGTTGTGGACCTGACACTTTAATTCCACCGCCCCCTGCGGATGCTTCTCTGTTA
CCTGAGGGGCTGAGGACCTCCCAGTTATTACCTTGCTCACCCAGCAAGCAGTCAGAGGAT
GGTCCCAAACCCTCCAACCAAGAAGGGAAGTCCCCTGCTCGGTTCCAGTTCACGGAGGAG
GACCTGCACTTCGTTCTGTACGGGGTCACTCCCAGCCTGGAGCACCCAGCCAGCCTGCAC
CATGCGATTTCAGGCCTCCTGGTCCCCCCAGACAGCTCTGGATCTGATTCTCTTCCTCAA
ACTCTGGATGAAGACTCCCTTCAACTTCCAGAAGGTCTATGCCTCATGCAGACGGTGTTT
GGTGAAGTCCCACATTTTGGTGTGTTCTGCAGTAGTTTTATCGCCAAAGGAGTCAGGTTT
GGGCCCTTTCAAGGTAAAGTGGTCAATGCCAGTGAAGTGAAGACCTACGGAGACAATTCT
GTGATGTGGGAGATCTTTGAAGATGGTCATTTGAGCCACTTTATAGATGGAAAAGGAGGT
ACGGGGAACTGGATGTCCTATGTCAACTGTGCCCGCTTCCCCAAGGAGCAGAACCTAGTT
GCTGTGCAGTGTCAAGGGCATATATTTTATGAGAGCTGCAAAGAGATTCATCAGAACCAA
GAGCTCCTTGTGTGGTATGGAGACTGCTATGAGAAATTTCTGGATATTCCTGTGAGCCTT
CAGGTCACAGAGCCGGGGAAGCAGCCATCTGGGCCCTCTGAAGAGTCTGCAGAAGGCTAC
AGATGTGAAAGATGTGGGAAGGTATTTACCTACAAATATTACAGAGATAAGCACCTCAAG
TACACCCCCTGTGTGGACAAGGGCGATAGGAAATTTCCCTGTTCTCTCTGCAAACGATCC
TTTGAGAAGCGGGACCGGCTTCGGATCCACATTCTTCATGTTCATGAGAAGCACCGGCCT
CACAAGTGTTCTACATGTGGGAAATGTTTCTCTCAGTCTTCCAGCCTAAACAAACACATG
CGAGTCCACTCTGGAGACAGACCATACCAGTGTGTGTATTGTACTAAGAGGTTCACAGCC
TCCAGCATACTCCGCACACACATCAGGCAGCACTCCGGGGAGAAGCCCTTCAAATGCAAG
TACTGTGGTAAATCTTTTGCATCCCATGCGGCCCATGACAGCCATGTCCGGCGTTCACAC
AAGGAGGACGATGGCTGCTCATGCAGCATCTGTGGGAAAATCTTCTCAGATCAAGAAACA
TTCTACTCCCACATGAAGTTTCATGAAGACTAC

ORF Protein

Cloned ORF protein sequence for pFN21AB7877 Download

>KIBB7877  571 aa
MALPRPSEAVPQDKVCYPPESSPQNLAAYYTPFPSYGHYRNSLATVEEDFQPFRQLEAAA
SAAPAMPPFPFRMAPPLLSPGLGLQREPLYDLPWYSKLPPWYPIPHVPREVPPFLSSSHE
YAGASSEDLGHQIIGGDNESGPCCGPDTLIPPPPADASLLPEGLRTSQLLPCSPSKQSED
GPKPSNQEGKSPARFQFTEEDLHFVLYGVTPSLEHPASLHHAISGLLVPPDSSGSDSLPQ
TLDEDSLQLPEGLCLMQTVFGEVPHFGVFCSSFIAKGVRFGPFQGKVVNASEVKTYGDNS
VMWEIFEDGHLSHFIDGKGGTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQNQ
ELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLK
YTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHM
RVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSH
KEDDGCSCSICGKIFSDQETFYSHMKFHEDY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7877 Download

>pFN21AB7877  6418 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTCTACCCCGGCCAAGTGAGGCCGTGCCTCA
GGACAAGGTGTGCTACCCGCCGGAGAGCAGCCCGCAGAACCTGGCCGCGTACTACACGCC
TTTCCCGTCCTATGGACACTACAGAAACAGCCTGGCCACCGTGGAGGAAGACTTCCAACC
TTTCCGGCAGCTGGAGGCCGCAGCGTCTGCTGCCCCCGCCATGCCCCCCTTCCCCTTCCG
GATGGCGCCTCCCTTGCTGAGCCCGGGTCTGGGCCTACAGAGGGAGCCTCTCTACGATCT
GCCCTGGTACAGCAAGCTGCCACCGTGGTACCCAATTCCCCACGTCCCCAGGGAAGTGCC
GCCCTTCCTGAGCAGCAGCCACGAGTACGCGGGTGCCAGCAGTGAAGATCTGGGCCACCA
AATCATTGGTGGCGACAACGAGAGTGGCCCGTGTTGTGGACCTGACACTTTAATTCCACC
GCCCCCTGCGGATGCTTCTCTGTTACCTGAGGGGCTGAGGACCTCCCAGTTATTACCTTG
CTCACCCAGCAAGCAGTCAGAGGATGGTCCCAAACCCTCCAACCAAGAAGGGAAGTCCCC
TGCTCGGTTCCAGTTCACGGAGGAGGACCTGCACTTCGTTCTGTACGGGGTCACTCCCAG
CCTGGAGCACCCAGCCAGCCTGCACCATGCGATTTCAGGCCTCCTGGTCCCCCCAGACAG
CTCTGGATCTGATTCTCTTCCTCAAACTCTGGATGAAGACTCCCTTCAACTTCCAGAAGG
TCTATGCCTCATGCAGACGGTGTTTGGTGAAGTCCCACATTTTGGTGTGTTCTGCAGTAG
TTTTATCGCCAAAGGAGTCAGGTTTGGGCCCTTTCAAGGTAAAGTGGTCAATGCCAGTGA
AGTGAAGACCTACGGAGACAATTCTGTGATGTGGGAGATCTTTGAAGATGGTCATTTGAG
CCACTTTATAGATGGAAAAGGAGGTACGGGGAACTGGATGTCCTATGTCAACTGTGCCCG
CTTCCCCAAGGAGCAGAACCTAGTTGCTGTGCAGTGTCAAGGGCATATATTTTATGAGAG
CTGCAAAGAGATTCATCAGAACCAAGAGCTCCTTGTGTGGTATGGAGACTGCTATGAGAA
ATTTCTGGATATTCCTGTGAGCCTTCAGGTCACAGAGCCGGGGAAGCAGCCATCTGGGCC
CTCTGAAGAGTCTGCAGAAGGCTACAGATGTGAAAGATGTGGGAAGGTATTTACCTACAA
ATATTACAGAGATAAGCACCTCAAGTACACCCCCTGTGTGGACAAGGGCGATAGGAAATT
TCCCTGTTCTCTCTGCAAACGATCCTTTGAGAAGCGGGACCGGCTTCGGATCCACATTCT
TCATGTTCATGAGAAGCACCGGCCTCACAAGTGTTCTACATGTGGGAAATGTTTCTCTCA
GTCTTCCAGCCTAAACAAACACATGCGAGTCCACTCTGGAGACAGACCATACCAGTGTGT
GTATTGTACTAAGAGGTTCACAGCCTCCAGCATACTCCGCACACACATCAGGCAGCACTC
CGGGGAGAAGCCCTTCAAATGCAAGTACTGTGGTAAATCTTTTGCATCCCATGCGGCCCA
TGACAGCCATGTCCGGCGTTCACACAAGGAGGACGATGGCTGCTCATGCAGCATCTGTGG
GAAAATCTTCTCAGATCAAGAAACATTCTACTCCCACATGAAGTTTCATGAAGACTACGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT