FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7877, 571 aa 1>>>pF1KB7877 571 - 571 aa - 571 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.3496+/-0.000434; mu= 1.4219+/- 0.027 mean_var=346.6665+/-74.034, 0's: 0 Z-trim(121.9): 1809 B-trim: 1674 in 1/56 Lambda= 0.068884 statistics sampled from 37091 (39278) to 37091 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.461), width: 16 Scan time: 10.540 The best scores are: opt bits E(85289) NP_078780 (OMIM: 611781) PR domain zinc finger pro ( 571) 4100 421.7 3.2e-117 XP_011515874 (OMIM: 611781) PREDICTED: PR domain z ( 316) 2294 241.9 2.3e-63 XP_005268650 (OMIM: 605780) PREDICTED: PR domain z ( 808) 578 71.8 9.3e-12 NP_036538 (OMIM: 605780) PR domain zinc finger pro ( 801) 576 71.6 1.1e-11 NP_068735 (OMIM: 194544) zinc finger protein 70 [H ( 446) 495 63.3 1.9e-09 NP_001092753 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 NP_005665 (OMIM: 601069) zinc finger protein 239 i ( 458) 494 63.2 2.1e-09 NP_001311276 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 NP_001092754 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 NP_001311277 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 NP_001311278 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 XP_005271889 (OMIM: 601069) PREDICTED: zinc finger ( 458) 494 63.2 2.1e-09 NP_001311279 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 NP_001092752 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 NP_001311280 (OMIM: 601069) zinc finger protein 23 ( 458) 494 63.2 2.1e-09 XP_011538540 (OMIM: 601069) PREDICTED: zinc finger ( 458) 494 63.2 2.1e-09 XP_006718066 (OMIM: 601069) PREDICTED: zinc finger ( 458) 494 63.2 2.1e-09 XP_006718064 (OMIM: 601069) PREDICTED: zinc finger ( 500) 494 63.3 2.2e-09 XP_011538537 (OMIM: 601069) PREDICTED: zinc finger ( 500) 494 63.3 2.2e-09 XP_011538536 (OMIM: 601069) PREDICTED: zinc finger ( 500) 494 63.3 2.2e-09 XP_011538539 (OMIM: 601069) PREDICTED: zinc finger ( 500) 494 63.3 2.2e-09 XP_011538538 (OMIM: 601069) PREDICTED: zinc finger ( 500) 494 63.3 2.2e-09 XP_016872229 (OMIM: 601069) PREDICTED: zinc finger ( 500) 494 63.3 2.2e-09 NP_001311281 (OMIM: 601069) zinc finger protein 23 ( 500) 494 63.3 2.2e-09 NP_001311282 (OMIM: 601069) zinc finger protein 23 ( 571) 494 63.3 2.4e-09 XP_011538534 (OMIM: 601069) PREDICTED: zinc finger ( 602) 494 63.3 2.5e-09 NP_001252529 (OMIM: 601856) zinc finger protein 21 ( 503) 492 63.1 2.6e-09 NP_001252528 (OMIM: 601856) zinc finger protein 21 ( 555) 492 63.1 2.7e-09 NP_942152 (OMIM: 601856) zinc finger protein 211 i ( 564) 492 63.1 2.7e-09 XP_011526568 (OMIM: 603971) PREDICTED: zinc finger (1092) 498 64.1 2.8e-09 XP_006722943 (OMIM: 603971) PREDICTED: zinc finger (1092) 498 64.1 2.8e-09 NP_006376 (OMIM: 601856) zinc finger protein 211 i ( 577) 492 63.1 2.8e-09 XP_016882725 (OMIM: 603971) PREDICTED: zinc finger (1118) 498 64.1 2.8e-09 XP_011526567 (OMIM: 603971) PREDICTED: zinc finger (1150) 498 64.1 2.9e-09 XP_016882724 (OMIM: 603971) PREDICTED: zinc finger (1150) 498 64.1 2.9e-09 NP_001287880 (OMIM: 603971) zinc finger protein 91 (1159) 498 64.1 2.9e-09 NP_001252527 (OMIM: 601856) zinc finger protein 21 ( 616) 492 63.2 2.9e-09 NP_003421 (OMIM: 603971) zinc finger protein 91 is (1191) 498 64.1 2.9e-09 NP_001309235 (OMIM: 601856) zinc finger protein 21 ( 627) 492 63.2 2.9e-09 NP_001252526 (OMIM: 601856) zinc finger protein 21 ( 629) 492 63.2 2.9e-09 XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 493 63.3 3e-09 NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 493 63.4 3.1e-09 XP_016882236 (OMIM: 165260) PREDICTED: zinc finger ( 327) 484 62.0 3.4e-09 XP_011525220 (OMIM: 165260) PREDICTED: zinc finger ( 327) 484 62.0 3.4e-09 XP_011525219 (OMIM: 165260) PREDICTED: zinc finger ( 491) 484 62.2 4.4e-09 NP_001308045 (OMIM: 165260) zinc finger and SCAN d ( 491) 484 62.2 4.4e-09 XP_006723255 (OMIM: 165260) PREDICTED: zinc finger ( 491) 484 62.2 4.4e-09 NP_862829 (OMIM: 165260) zinc finger and SCAN doma ( 491) 484 62.2 4.4e-09 NP_001273984 (OMIM: 601260) zinc finger protein wi ( 350) 480 61.7 4.6e-09 XP_016878355 (OMIM: 604752) PREDICTED: zinc finger ( 487) 483 62.1 4.7e-09 >>NP_078780 (OMIM: 611781) PR domain zinc finger protein (571 aa) initn: 4100 init1: 4100 opt: 4100 Z-score: 2225.5 bits: 421.7 E(85289): 3.2e-117 Smith-Waterman score: 4100; 99.8% identity (100.0% similar) in 571 aa overlap (1-571:1-571) 10 20 30 40 50 60 pF1KB7 MALPRPSEAVPQDKVCYPPESSPQNLAAYYTPFPSYGHYRNSLATVEEDFQPFRQLEAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 MALPRPSEAVPQDKVCYPPESSPQNLAAYYTPFPSYGHYRNSLATVEEDFQPFRQLEAAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 SAAPAMPPFPFRMAPPLLSPGLGLQREPLYDLPWYSKLPPWYPIPHVPREVPPFLSSSHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 SAAPAMPPFPFRMAPPLLSPGLGLQREPLYDLPWYSKLPPWYPIPHVPREVPPFLSSSHE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 YAGASSEDLGHQIIGGDNESGPCCGPDTLIPPPPADASLLPEGLRTSQLLPCSPSKQSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 YAGASSEDLGHQIIGGDNESGPCCGPDTLIPPPPADASLLPEGLRTSQLLPCSPSKQSED 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 GPKPSNQEGKSPARFQFTEEDLHFVLYGVTPSLEHPASLHHAISGLLVPPDSSGSDSLPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 GPKPSNQEGKSPARFQFTEEDLHFVLYGVTPSLEHPASLHHAISGLLVPPDSSGSDSLPQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 TLDEDSLQLPEGLCLMQTVFGEVPHFGVFCSSFIAKGVRFGPFQGKVVNASEVKTYGDNS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 TLDKDSLQLPEGLCLMQTVFGEVPHFGVFCSSFIAKGVRFGPFQGKVVNASEVKTYGDNS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 VMWEIFEDGHLSHFIDGKGGTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 VMWEIFEDGHLSHFIDGKGGTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQNQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 ELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 ELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB7 YTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 YTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB7 RVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 RVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSH 490 500 510 520 530 540 550 560 570 pF1KB7 KEDDGCSCSICGKIFSDQETFYSHMKFHEDY ::::::::::::::::::::::::::::::: NP_078 KEDDGCSCSICGKIFSDQETFYSHMKFHEDY 550 560 570 >>XP_011515874 (OMIM: 611781) PREDICTED: PR domain zinc (316 aa) initn: 2294 init1: 2294 opt: 2294 Z-score: 1258.5 bits: 241.9 E(85289): 2.3e-63 Smith-Waterman score: 2294; 100.0% identity (100.0% similar) in 316 aa overlap (256-571:1-316) 230 240 250 260 270 280 pF1KB7 LLVPPDSSGSDSLPQTLDEDSLQLPEGLCLMQTVFGEVPHFGVFCSSFIAKGVRFGPFQG :::::::::::::::::::::::::::::: XP_011 MQTVFGEVPHFGVFCSSFIAKGVRFGPFQG 10 20 30 290 300 310 320 330 340 pF1KB7 KVVNASEVKTYGDNSVMWEIFEDGHLSHFIDGKGGTGNWMSYVNCARFPKEQNLVAVQCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVVNASEVKTYGDNSVMWEIFEDGHLSHFIDGKGGTGNWMSYVNCARFPKEQNLVAVQCQ 40 50 60 70 80 90 350 360 370 380 390 400 pF1KB7 GHIFYESCKEIHQNQELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GHIFYESCKEIHQNQELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERC 100 110 120 130 140 150 410 420 430 440 450 460 pF1KB7 GKVFTYKYYRDKHLKYTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GKVFTYKYYRDKHLKYTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCST 160 170 180 190 200 210 470 480 490 500 510 520 pF1KB7 CGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKS 220 230 240 250 260 270 530 540 550 560 570 pF1KB7 FASHAAHDSHVRRSHKEDDGCSCSICGKIFSDQETFYSHMKFHEDY :::::::::::::::::::::::::::::::::::::::::::::: XP_011 FASHAAHDSHVRRSHKEDDGCSCSICGKIFSDQETFYSHMKFHEDY 280 290 300 310 >>XP_005268650 (OMIM: 605780) PREDICTED: PR domain zinc (808 aa) initn: 444 init1: 266 opt: 578 Z-score: 332.1 bits: 71.8 E(85289): 9.3e-12 Smith-Waterman score: 578; 30.4% identity (60.5% similar) in 352 aa overlap (230-569:389-732) 200 210 220 230 240 250 pF1KB7 EDLHFVLYGVTPSLEHPASLHHAISGLLVPPDSSGSDSLPQTLDEDS--LQLPEGLCLMQ :. . .:.: :. :.::. : : : XP_005 MEDSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQ 360 370 380 390 400 410 260 270 280 290 300 310 pF1KB7 TVFG-EV----PHFGVFCSSFIAKGVRFGPFQGKVVNASEVKTYGDNSV--MWEIFEDGH .. : :: : ::. . : . :::. :. .. :: . :..: .:.:...: XP_005 SIVGAEVVGVLPLTGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGV 420 430 440 450 460 470 320 330 340 350 360 pF1KB7 LSH-FIDGKGGTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQNQELLVWYGDC : .: . ::: .: :: .:::::: .:.::. . ..: ..::: .:. XP_005 LEFCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRD 480 490 500 510 520 530 370 380 390 400 410 420 pF1KB7 YEKFLDIPV--SLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDK : . . .: .... . ::. .. .: .. . ... .. . . .. : .: XP_005 YAQQIGVPEHPDVHLCNCGKECNSYTE-----FKAHLTSHIHNHLPTQGHSGSHGPSHSK 540 550 560 570 580 590 430 440 450 460 470 480 pF1KB7 GDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDR .::. ::.: ..: . ..:..:.. : .::::. :.: ::. :.: :...:.:.. XP_005 -ERKWKCSMCPQAFISPSKLHVHFMG-HMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQK 600 610 620 630 640 650 490 500 510 520 530 540 pF1KB7 PYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCS :.:. : : :: .. :..:. :.::: .:: :: : : . .:: : .. . XP_005 NYRCTLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVL-IHTQERQIK 660 670 680 690 700 710 550 560 570 pF1KB7 CSICGKIFSDQETFYSHMKFHEDY : : :.: . . .:.. :: XP_005 CPKCDKLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPE 720 730 740 750 760 770 >>NP_036538 (OMIM: 605780) PR domain zinc finger protein (801 aa) initn: 444 init1: 266 opt: 576 Z-score: 331.1 bits: 71.6 E(85289): 1.1e-11 Smith-Waterman score: 576; 30.0% identity (60.8% similar) in 347 aa overlap (230-569:389-725) 200 210 220 230 240 250 pF1KB7 EDLHFVLYGVTPSLEHPASLHHAISGLLVPPDSSGSDSLPQTLDEDS--LQLPEGLCLMQ :. . .:.: :. :.::. : : : NP_036 MEDSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQ 360 370 380 390 400 410 260 270 280 290 300 310 pF1KB7 TVFGEVPHFGVFCSSFIAKGVRFGPFQGKVVNASEVKTYGDNSV--MWEIFEDGHLSH-F .. : . ::. . : . :::. :. .. :: . :..: .:.:...: : . NP_036 SIVGA--EVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCI 420 430 440 450 460 470 320 330 340 350 360 370 pF1KB7 IDGKGGTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQNQELLVWYGDCYEKFL : . ::: .: :: .:::::: .:.::. . ..: ..::: .:. : . . NP_036 ITTDENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQQI 480 490 500 510 520 530 380 390 400 410 420 430 pF1KB7 DIPV--SLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGDRKF .: .... . ::. .. .: .. . ... .. . . .. : .: .::. NP_036 GVPEHPDVHLCNCGKECNSYTE-----FKAHLTSHIHNHLPTQGHSGSHGPSHSK-ERKW 540 550 560 570 580 590 440 450 460 470 480 490 pF1KB7 PCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPYQCV ::.: ..: . ..:..:.. : .::::. :.: ::. :.: :...:.:.. :.:. NP_036 KCSMCPQAFISPSKLHVHFMG-HMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCT 600 610 620 630 640 500 510 520 530 540 550 pF1KB7 YCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCSICG : : :: .. :..:. :.::: .:: :: : : . .:: : .. .: : NP_036 LCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVL-IHTQERQIKCPKCD 650 660 670 680 690 700 560 570 pF1KB7 KIFSDQETFYSHMKFHEDY :.: . . .:.. :: NP_036 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED 710 720 730 740 750 760 >>NP_068735 (OMIM: 194544) zinc finger protein 70 [Homo (446 aa) initn: 1705 init1: 288 opt: 495 Z-score: 290.5 bits: 63.3 E(85289): 1.9e-09 Smith-Waterman score: 495; 35.9% identity (62.6% similar) in 198 aa overlap (377-568:112-302) 350 360 370 380 390 400 pF1KB7 HIFYESCKEIHQNQELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGP-----SEESAEGYR : . .: . ::: . . :. : NP_068 GTRPQDDELFGQTFLQKSDLSMCQIIHSEEPSPCDCAETDRGDSGPNAPHRTPQPAKPYA 90 100 110 120 130 140 410 420 430 440 450 460 pF1KB7 CERCGKVFTYKYYRDKHLKYTPCVDKGDRKFPCSLCKRSFEKRDRL-RIHILHVHEKHRP :..:::.:. . . .:: . :.. . : : ..: . ..: : .:.:. :: : NP_068 CRECGKAFSQSSHLLRHL----VIHTGEKPYECCECGKAFSQSSHLLRHQIIHTGEK--P 150 160 170 180 190 470 480 490 500 510 520 pF1KB7 HKCSTCGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCK ..: ::: : :::.:..:...:.: :::.: : : :. :: :: : : :.::.:..:: NP_068 YECRECGKAFRQSSALTQHQKIHTGKRPYECRECGKDFSRSSSLRKHERIHTGERPYQCK 200 210 220 230 240 250 530 540 550 560 570 pF1KB7 YCGKSFASHAAHDSHVRRSHKEDDGCSCSICGKIFSDQETFYSHMKFHEDY ::::: . .. ..: :. : :..::: : . . :...: NP_068 ECGKSFNQSSGLSQH-RKIHTLKKPHECDLCGKAFCHRSHLIRHQRIHTGKKPYKCDECG 260 270 280 290 300 310 NP_068 KAFSQSSNLIEHRKTHTGEKPYKCQKCGKAFSQSSSLIEHQRIHTGEKPYECCQCGKAFC 320 330 340 350 360 370 >-- initn: 493 init1: 279 opt: 346 Z-score: 210.5 bits: 48.5 E(85289): 5.5e-05 Smith-Waterman score: 403; 39.0% identity (65.2% similar) in 141 aa overlap (428-568:304-441) 400 410 420 430 440 450 pF1KB7 EGYRCERCGKVFTYKYYRDKHLKYTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEK : . . :. : ..: . . : : ..: NP_068 HTLKKPHECDLCGKAFCHRSHLIRHQRIHTGKKPYKCDECGKAFSQSSNLIEH-RKTHTG 280 290 300 310 320 330 460 470 480 490 500 510 pF1KB7 HRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPF ..:.::. ::: ::::::: .:.:.:.:..::.: : : : :: : : : :.:.::. NP_068 EKPYKCQKCGKAFSQSSSLIEHQRIHTGEKPYECCQCGKAFCHSSALIQHQRIHTGKKPY 340 350 360 370 380 390 520 530 540 550 560 570 pF1KB7 KCKYCGKSFASHAAHDSHVRRSHKEDDGCSCSICGKIFSDQETFYSHMKFHEDY :. :::.: ..: : . .: .. :..::: : . . :.:.: NP_068 TCE-CGKAFRHRSALIEHYK-THTREKPYVCNLCGKSFRGSSHLIRHQKIHSGEKL 400 410 420 430 440 >>NP_001092753 (OMIM: 601069) zinc finger protein 239 is (458 aa) initn: 2085 init1: 322 opt: 494 Z-score: 289.8 bits: 63.2 E(85289): 2.1e-09 Smith-Waterman score: 494; 41.2% identity (65.3% similar) in 170 aa overlap (400-569:291-454) 370 380 390 400 410 420 pF1KB7 YEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGD :.:..::: :. . : . : :. NP_001 KPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQR----VHTGE 270 280 290 300 310 430 440 450 460 470 480 pF1KB7 RKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPY . . : : :: .:. :.:: .:: .::.::. ::: :::::.:. : .:.:..:: NP_001 KPYECEECGMSFSQRSNLHIH-QRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPY 320 330 340 350 360 370 490 500 510 520 530 540 pF1KB7 QCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCS :: : : :. :: :: :.: :.::::..: :::.:.. . : .: : . :: NP_001 QCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLIH-QRVHTGEKPYECS 380 390 400 410 420 430 550 560 570 pF1KB7 ICGKIFSDQETFYSHMKFHEDY ::: ::.. ... :.. :. NP_001 KCGKGFSQSSNLHIHQRVHKKDPR 440 450 >>NP_005665 (OMIM: 601069) zinc finger protein 239 isofo (458 aa) initn: 2085 init1: 322 opt: 494 Z-score: 289.8 bits: 63.2 E(85289): 2.1e-09 Smith-Waterman score: 494; 41.2% identity (65.3% similar) in 170 aa overlap (400-569:291-454) 370 380 390 400 410 420 pF1KB7 YEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGD :.:..::: :. . : . : :. NP_005 KPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQR----VHTGE 270 280 290 300 310 430 440 450 460 470 480 pF1KB7 RKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPY . . : : :: .:. :.:: .:: .::.::. ::: :::::.:. : .:.:..:: NP_005 KPYECEECGMSFSQRSNLHIH-QRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPY 320 330 340 350 360 370 490 500 510 520 530 540 pF1KB7 QCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCS :: : : :. :: :: :.: :.::::..: :::.:.. . : .: : . :: NP_005 QCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLIH-QRVHTGEKPYECS 380 390 400 410 420 430 550 560 570 pF1KB7 ICGKIFSDQETFYSHMKFHEDY ::: ::.. ... :.. :. NP_005 KCGKGFSQSSNLHIHQRVHKKDPR 440 450 >>NP_001311276 (OMIM: 601069) zinc finger protein 239 is (458 aa) initn: 2085 init1: 322 opt: 494 Z-score: 289.8 bits: 63.2 E(85289): 2.1e-09 Smith-Waterman score: 494; 41.2% identity (65.3% similar) in 170 aa overlap (400-569:291-454) 370 380 390 400 410 420 pF1KB7 YEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGD :.:..::: :. . : . : :. NP_001 KPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQR----VHTGE 270 280 290 300 310 430 440 450 460 470 480 pF1KB7 RKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPY . . : : :: .:. :.:: .:: .::.::. ::: :::::.:. : .:.:..:: NP_001 KPYECEECGMSFSQRSNLHIH-QRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPY 320 330 340 350 360 370 490 500 510 520 530 540 pF1KB7 QCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCS :: : : :. :: :: :.: :.::::..: :::.:.. . : .: : . :: NP_001 QCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLIH-QRVHTGEKPYECS 380 390 400 410 420 430 550 560 570 pF1KB7 ICGKIFSDQETFYSHMKFHEDY ::: ::.. ... :.. :. NP_001 KCGKGFSQSSNLHIHQRVHKKDPR 440 450 >>NP_001092754 (OMIM: 601069) zinc finger protein 239 is (458 aa) initn: 2085 init1: 322 opt: 494 Z-score: 289.8 bits: 63.2 E(85289): 2.1e-09 Smith-Waterman score: 494; 41.2% identity (65.3% similar) in 170 aa overlap (400-569:291-454) 370 380 390 400 410 420 pF1KB7 YEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGD :.:..::: :. . : . : :. NP_001 KPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQR----VHTGE 270 280 290 300 310 430 440 450 460 470 480 pF1KB7 RKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPY . . : : :: .:. :.:: .:: .::.::. ::: :::::.:. : .:.:..:: NP_001 KPYECEECGMSFSQRSNLHIH-QRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPY 320 330 340 350 360 370 490 500 510 520 530 540 pF1KB7 QCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCS :: : : :. :: :: :.: :.::::..: :::.:.. . : .: : . :: NP_001 QCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLIH-QRVHTGEKPYECS 380 390 400 410 420 430 550 560 570 pF1KB7 ICGKIFSDQETFYSHMKFHEDY ::: ::.. ... :.. :. NP_001 KCGKGFSQSSNLHIHQRVHKKDPR 440 450 >>NP_001311277 (OMIM: 601069) zinc finger protein 239 is (458 aa) initn: 2085 init1: 322 opt: 494 Z-score: 289.8 bits: 63.2 E(85289): 2.1e-09 Smith-Waterman score: 494; 41.2% identity (65.3% similar) in 170 aa overlap (400-569:291-454) 370 380 390 400 410 420 pF1KB7 YEKFLDIPVSLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGD :.:..::: :. . : . : :. NP_001 KPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQR----VHTGE 270 280 290 300 310 430 440 450 460 470 480 pF1KB7 RKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPY . . : : :: .:. :.:: .:: .::.::. ::: :::::.:. : .:.:..:: NP_001 KPYECEECGMSFSQRSNLHIH-QRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPY 320 330 340 350 360 370 490 500 510 520 530 540 pF1KB7 QCVYCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCS :: : : :. :: :: :.: :.::::..: :::.:.. . : .: : . :: NP_001 QCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLIH-QRVHTGEKPYECS 380 390 400 410 420 430 550 560 570 pF1KB7 ICGKIFSDQETFYSHMKFHEDY ::: ::.. ... :.. :. NP_001 KCGKGFSQSSNLHIHQRVHKKDPR 440 450 571 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:19:22 2016 done: Tue Nov 8 05:19:23 2016 Total Scan time: 10.540 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]