ZSCAN5A ORF clone pFN21AB7754

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7754

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Clone info.

Species

human

Clone Name

pFN21AB7754 Sequence (with vector) Restriction Map

Product ID

FHC07529

Flexi Clone PID

FXC07529

ORF Sequence

DNA sequence (1488 bp)
Protein sequence (496 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464371]

Gene

KIBB7754

Symbol

ZSCAN5A

Alias : ZNF495, ZSCAN5

Description

zinc finger and SCAN domain containing 5A

Original Clone ID

cs00254

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1488 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 496 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12941.1 2.6e-118 100.0 ZSCAN5A CCDS82403.1 1.8e-117 99.6 ZSCAN5A CCDS46203.1 2.4e-92 79.0 ZSCAN5B CCDS45852.1 5.4e-20 31.5 ZNF397 CCDS5671.2 1.6e-19 32.8 ZSCAN25 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 39 121 PF02023 Transcription regulator SCAN IPR007087 440 462 PF00096 Zinc finger IPR007087 468 490 PF00096 Zinc finger HMMSmart IPR003309 40 148 SM00431 Transcription regulator SCAN IPR015880 356 378 SM00355 Zinc finger IPR015880 384 406 SM00355 Zinc finger IPR015880 412 434 SM00355 Zinc finger IPR015880 440 462 SM00355 Zinc finger IPR015880 468 490 SM00355 Zinc finger ProfileScan IPR003309 47 124 PS50804 Transcription regulator SCAN IPR007087 356 383 PS50157 Zinc finger IPR007087 384 411 PS50157 Zinc finger IPR007087 412 439 PS50157 Zinc finger IPR007087 440 467 PS50157 Zinc finger IPR007087 468 495 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011524533 534 609601 31.5 92.5 XP_016881531 534 609601 31.5 92.5 NP_001128650 534 609601 31.5 92.5 XP_011520948 500 601473 31.4 91.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7754 Download

>KIBB7754  1488 bp
ATGGCTGCAAATTGCACATCCTCATGGAGTCTAGGAGAATCCTGCAACAGACCTGGGTTG
GAGCTGCCACGGTCTATGGCATCCTCAGAAACTCAACTTGGAAATCACGACGTGGACCCT
GAGATTTCTCACGTGAACTTCAGGATGTTCAGCTGCCCGAAGGAGTCGGACCCCATCCAG
GCTCTGAGGAAACTCACTGAGCTGTGCCATCTGTGGCTGAGGCCCGACCTCCACACCAAA
GAGCAGATCCTGGACATGCTGGTGATGGAGCAGTTCATGATCTCCATGCCCCAGGAGCTC
CAGGTCTTAGTCATGATGAACGGTGTGCAGAGCTGCAAAGACCTGGAGGACCTGCTACGA
AATAACAGAAGACCCAAGAAATGGTCTGTGGTCACCTTCCACGGAAAGGAATATATTGTG
CAGGACTCAGATATCGAGATGGCTGAAGCCCCCTCCAGTGTCAGAGATGATCTGAAAGAC
GTGTCCAGCCAACGGGCCTCCTCGGTGAACCAGATGCGTCCAGGGGAAGGCCAGGCCCAC
CGAGAGCTGCAGATCCTGCCCAGGGTCCCTGCATTGTCCAGGAGGCAGGGAGAGGACTTT
CTGCTACACAAGAGTATTGACGTAACAGGTGACCCAAAGTCTCTGAGACCCAAGCAGACC
TTGGAGAAGGATCTGAAGGAAAACAGGGAAGAGAACCCAGGACTGACATCCCCAGAGCCT
CAGCTTCCAAAGAGTCCCACAGATCTGGTGAGAGCAAAGGAGGGGAAGGACCCCCCAAAA
ATAGCCTCTGTGGAAAATGTGGATGCTGACACACCTTCTGCCTGCGTTGTGGAGAGAGAA
GCTTCGACTCACAGCGGGAACAGAGGAGACGCTCTGAATCTGAGCAGTCCCAAAAGAAGC
AAACCAGATGCCTCCTCCATTTCCCAAGAAGAGCCTCAAGGAGAAGCCACACCTGTGGGC
AACAGAGAATCCCCGGGACAAGCTGGGATGAATTCAATTCATTCCCCAGGCCCTGCGAGC
CCAGTCAGTCACCCGGATGGCCAAGAAGCCAAGGCACTGCCGCCCTTTGCATGTGACGTG
TGCGAGAAGAGGTTTACGTGTAATTCCAAGCTAGTCATCCACAAGAGATCACACACAGGC
GAGAGACTCTTTCAATGTAATCTCTGTGGGAAGCGCTTCATGCAGCTTATTAGCCTCCAA
TTTCACCAGCGAACCCACACTGGCGAGAGGCCCTACACGTGTGACGTCTGCCAGAAGCAG
TTCACCCAGAAGTCCTACTTGAAGTGTCACAAGAGAAGCCACACAGGGGAGAAGCCCTTC
GAATGTAAAGACTGCAAGAAAGTTTTCACCTACAGGGGGAGCCTGAAGGAGCACCAGCGC
ATCCACTCCGGAGAGAAACCCTACAAATGTTCCAAGTGTCCAAGAGCCTTCAGTCGGCTG
AAATTGTTAAGACGCCACCAGAAAACACATCCAGAAGCTACTTCTCAG

ORF Protein

Cloned ORF protein sequence for pFN21AB7754 Download

>KIBB7754  496 aa
MAANCTSSWSLGESCNRPGLELPRSMASSETQLGNHDVDPEISHVNFRMFSCPKESDPIQ
ALRKLTELCHLWLRPDLHTKEQILDMLVMEQFMISMPQELQVLVMMNGVQSCKDLEDLLR
NNRRPKKWSVVTFHGKEYIVQDSDIEMAEAPSSVRDDLKDVSSQRASSVNQMRPGEGQAH
RELQILPRVPALSRRQGEDFLLHKSIDVTGDPKSLRPKQTLEKDLKENREENPGLTSPEP
QLPKSPTDLVRAKEGKDPPKIASVENVDADTPSACVVEREASTHSGNRGDALNLSSPKRS
KPDASSISQEEPQGEATPVGNRESPGQAGMNSIHSPGPASPVSHPDGQEAKALPPFACDV
CEKRFTCNSKLVIHKRSHTGERLFQCNLCGKRFMQLISLQFHQRTHTGERPYTCDVCQKQ
FTQKSYLKCHKRSHTGEKPFECKDCKKVFTYRGSLKEHQRIHSGEKPYKCSKCPRAFSRL
KLLRRHQKTHPEATSQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7754 Download

>pFN21AB7754  6193 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGCAAATTGCACATCCTCATGGAGTCTAGG
AGAATCCTGCAACAGACCTGGGTTGGAGCTGCCACGGTCTATGGCATCCTCAGAAACTCA
ACTTGGAAATCACGACGTGGACCCTGAGATTTCTCACGTGAACTTCAGGATGTTCAGCTG
CCCGAAGGAGTCGGACCCCATCCAGGCTCTGAGGAAACTCACTGAGCTGTGCCATCTGTG
GCTGAGGCCCGACCTCCACACCAAAGAGCAGATCCTGGACATGCTGGTGATGGAGCAGTT
CATGATCTCCATGCCCCAGGAGCTCCAGGTCTTAGTCATGATGAACGGTGTGCAGAGCTG
CAAAGACCTGGAGGACCTGCTACGAAATAACAGAAGACCCAAGAAATGGTCTGTGGTCAC
CTTCCACGGAAAGGAATATATTGTGCAGGACTCAGATATCGAGATGGCTGAAGCCCCCTC
CAGTGTCAGAGATGATCTGAAAGACGTGTCCAGCCAACGGGCCTCCTCGGTGAACCAGAT
GCGTCCAGGGGAAGGCCAGGCCCACCGAGAGCTGCAGATCCTGCCCAGGGTCCCTGCATT
GTCCAGGAGGCAGGGAGAGGACTTTCTGCTACACAAGAGTATTGACGTAACAGGTGACCC
AAAGTCTCTGAGACCCAAGCAGACCTTGGAGAAGGATCTGAAGGAAAACAGGGAAGAGAA
CCCAGGACTGACATCCCCAGAGCCTCAGCTTCCAAAGAGTCCCACAGATCTGGTGAGAGC
AAAGGAGGGGAAGGACCCCCCAAAAATAGCCTCTGTGGAAAATGTGGATGCTGACACACC
TTCTGCCTGCGTTGTGGAGAGAGAAGCTTCGACTCACAGCGGGAACAGAGGAGACGCTCT
GAATCTGAGCAGTCCCAAAAGAAGCAAACCAGATGCCTCCTCCATTTCCCAAGAAGAGCC
TCAAGGAGAAGCCACACCTGTGGGCAACAGAGAATCCCCGGGACAAGCTGGGATGAATTC
AATTCATTCCCCAGGCCCTGCGAGCCCAGTCAGTCACCCGGATGGCCAAGAAGCCAAGGC
ACTGCCGCCCTTTGCATGTGACGTGTGCGAGAAGAGGTTTACGTGTAATTCCAAGCTAGT
CATCCACAAGAGATCACACACAGGCGAGAGACTCTTTCAATGTAATCTCTGTGGGAAGCG
CTTCATGCAGCTTATTAGCCTCCAATTTCACCAGCGAACCCACACTGGCGAGAGGCCCTA
CACGTGTGACGTCTGCCAGAAGCAGTTCACCCAGAAGTCCTACTTGAAGTGTCACAAGAG
AAGCCACACAGGGGAGAAGCCCTTCGAATGTAAAGACTGCAAGAAAGTTTTCACCTACAG
GGGGAGCCTGAAGGAGCACCAGCGCATCCACTCCGGAGAGAAACCCTACAAATGTTCCAA
GTGTCCAAGAGCCTTCAGTCGGCTGAAATTGTTAAGACGCCACCAGAAAACACATCCAGA
AGCTACTTCTCAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT