PYGO1 ORF clone pFN21AB7253

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7253

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Clone info.

Species

human

Clone Name

pFN21AB7253 Sequence (with vector) Restriction Map

Product ID

FHC06549

Flexi Clone PID

FXC06549

ORF Sequence

DNA sequence (1257 bp)
Protein sequence (419 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB7253

Symbol

PYGO1

Description

pygopus family PHD finger 1

Original Clone ID

oc00469

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1257 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 419 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10155.1 8.8e-98 100.0 PYGO1 CCDS81885.1 2.1e-94 97.1 PYGO1 CCDS1075.1 5.1e-14 37.6 PYGO2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019787 343 397 PF00628 Zinc finger HMMSmart IPR001965 342 396 SM00249 Zinc finger ProfileScan IPR019787 340 398 PS50016 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056432 419 606902 100.0 100.0 NP_001354735 419 606902 97.1 100.0 NP_001317255 419 606902 97.1 100.0 NP_612157 406 606903 37.6 99.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7253 Download

>KIBB7253  1257 bp
ATGCCCGCCGAGAACTCTCCAGCTCCCGCTTACAAAGTTTCCTCGCATGGTGGTGATAGT
GGACTGGATGGGTTAGGAGGACCAGGTGTACAACTAGGAAGCCCAGATAAGAAAAAGCGC
AAGGCAAATACACAGGGACCTTCTTTCCCTCCATTGTCTGAGTATGCTCCACCACCGAAT
CCAAACTCTGACCATCTAGTGGCTGCTAATCCATTTGATGACAACTATAATACTATTTCC
TATAAACCACTACCTTCGTCAAATCCATATCTTGGCCCTGGTTATCCTGGCTTTGGAGGC
TATAGTACATTCAGAATGCCACCTCACGTTCCCCCAAGAATGTCTTCCCCATACTGTGGT
CCTTACTCACTCAGGAACCAGCCACACCCATTTCCTCAGAATCCTCTGGGCATGGGTTTT
AATCGACCTCATGCTTTTAACTTTGGGCCACATGATAATTCAAGTTTCGGTAATCCATCT
TATAATAATGCACTAAGTCAGAATGTCAACATGCCTAATCAACATTTTAGACAAAATCCT
GCTGAAAATTTCAGTCAAATTCCTCCACAGAATGCTAGCCAAGTTTCTAACCCCGATTTG
GCATCTAATTTTGTTCCTGGAAATAATTCAAATTTTACTTCTCCGTTAGAATCTAATCAT
TCTTTTATTCCTCCCCCAAACACTTTTGGTCAAGCAAAAGCACCACCCCCAAAACAAGAC
TTTACTCAAGGAGCAACCAAAAACACTAATCAAAATTCCTCTGCTCATCCACCTCACTTG
AATATGGATGACACAGTGAATCAGAGTAATATTGAATTAAAAAATGTTAATCGAAACAAT
GCAGTAAATCAGGAGAACAGCCGTTCAAGTAGCACTGAAGCCACAAACAATAACCCTGCA
AATGGGACGCAGAATAAGCCACGACAACCAAGAGGTGCAGCAGATGCCTGCACCACAGAA
AAAAGCAATAAATCCTCTCTTCACCCAAACCGTCATGGCCATTCGTCTTCTGACCCAGTG
TATCCTTGTGGAATTTGTACAAACGAGGTGAACGATGATCAGGATGCCATCTTATGTGAG
GCCTCTTGTCAGAAATGGTTTCATCGGATCTGTACTGGAATGACTGAAACAGCTTATGGC
CTCTTAACTGCAGAAGCATCTGCAGTATGGGGCTGTGATACCTGTATGGCTGACAAAGAT
GTCCAGTTAATGCGTACTAGAGAAACTTTTGGTCCATCTGCAGTGGGCAGTGATGCT

ORF Protein

Cloned ORF protein sequence for pFN21AB7253 Download

>KIBB7253  419 aa
MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN
PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG
PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP
AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD
FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA
NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE
ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7253 Download

>pFN21AB7253  5962 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCCGCCGAGAACTCTCCAGCTCCCGCTTACAA
AGTTTCCTCGCATGGTGGTGATAGTGGACTGGATGGGTTAGGAGGACCAGGTGTACAACT
AGGAAGCCCAGATAAGAAAAAGCGCAAGGCAAATACACAGGGACCTTCTTTCCCTCCATT
GTCTGAGTATGCTCCACCACCGAATCCAAACTCTGACCATCTAGTGGCTGCTAATCCATT
TGATGACAACTATAATACTATTTCCTATAAACCACTACCTTCGTCAAATCCATATCTTGG
CCCTGGTTATCCTGGCTTTGGAGGCTATAGTACATTCAGAATGCCACCTCACGTTCCCCC
AAGAATGTCTTCCCCATACTGTGGTCCTTACTCACTCAGGAACCAGCCACACCCATTTCC
TCAGAATCCTCTGGGCATGGGTTTTAATCGACCTCATGCTTTTAACTTTGGGCCACATGA
TAATTCAAGTTTCGGTAATCCATCTTATAATAATGCACTAAGTCAGAATGTCAACATGCC
TAATCAACATTTTAGACAAAATCCTGCTGAAAATTTCAGTCAAATTCCTCCACAGAATGC
TAGCCAAGTTTCTAACCCCGATTTGGCATCTAATTTTGTTCCTGGAAATAATTCAAATTT
TACTTCTCCGTTAGAATCTAATCATTCTTTTATTCCTCCCCCAAACACTTTTGGTCAAGC
AAAAGCACCACCCCCAAAACAAGACTTTACTCAAGGAGCAACCAAAAACACTAATCAAAA
TTCCTCTGCTCATCCACCTCACTTGAATATGGATGACACAGTGAATCAGAGTAATATTGA
ATTAAAAAATGTTAATCGAAACAATGCAGTAAATCAGGAGAACAGCCGTTCAAGTAGCAC
TGAAGCCACAAACAATAACCCTGCAAATGGGACGCAGAATAAGCCACGACAACCAAGAGG
TGCAGCAGATGCCTGCACCACAGAAAAAAGCAATAAATCCTCTCTTCACCCAAACCGTCA
TGGCCATTCGTCTTCTGACCCAGTGTATCCTTGTGGAATTTGTACAAACGAGGTGAACGA
TGATCAGGATGCCATCTTATGTGAGGCCTCTTGTCAGAAATGGTTTCATCGGATCTGTAC
TGGAATGACTGAAACAGCTTATGGCCTCTTAACTGCAGAAGCATCTGCAGTATGGGGCTG
TGATACCTGTATGGCTGACAAAGATGTCCAGTTAATGCGTACTAGAGAAACTTTTGGTCC
ATCTGCAGTGGGCAGTGATGCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT