SNTA1 ORF clone pFN21AB5917

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5917

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Clone info.

Species

human

Clone Name

pFN21AB5917 Sequence (with vector) Restriction Map

Product ID

FHC09192

ORF Sequence

DNA sequence (1515 bp)
Protein sequence (505 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590297]

Gene

KIBB5917

Symbol

SNTA1

Alias : LQT12, SNT1, TACIP1, dJ1187J4.5

Description

syntrophin, alpha 1

Original Clone ID

cs00617

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1515 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 505 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13220.1 2.1e-147 100.0 SNTA1 CCDS6334.1 3.9e-68 50.8 SNTB1 CCDS10873.1 3e-60 47.6 SNTB2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001478 89 166 PF00595 PDZ/DHR/GLGF HMMSmart IPR001849 7 271 SM00233 Pleckstrin homology domain IPR001478 96 170 SM00228 PDZ/DHR/GLGF IPR001849 294 403 SM00233 Pleckstrin homology domain ProfileScan IPR001849 6 269 PS50003 Pleckstrin homology domain IPR001478 87 170 PS50106 PDZ/DHR/GLGF IPR001849 293 401 PS50003 Pleckstrin homology domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003089 505 601017,612955 100.0 100.0 XP_005260574 504 601017,612955 99.8 100.0 XP_011527310 495 601017,612955 100.0 81.6 XP_011527309 496 601017,612955 100.0 81.6 NP_066301 538 600026 50.8 99.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5917 Download

>KIBB5917  1515 bp
ATGGCGTCCGGCAGGCGCGCCCCGCGCACCGGGCTGCTGGAGCTGCGCGCCGGGGCGGGC
TCGGGGGCCGGCGGCGAGCGATGGCAGCGGGTGCTGCTGAGTCTGGCGGAGGACGTGCTG
ACCGTGAGCCCCGCCGACGGCGACCCTGGTCCCGAGCCCGGCGCTCCGCGGGAGCAGGAG
CCCGCGCAGCTCAACGGCGCCGCGGAGCCGGGCGCCGGGCCCCCGCAGCTGCCAGAGGCG
CTACTGCTCCAGCGGCGCCGCGTGACGGTGCGCAAGGCCGACGCCGGTGGGCTGGGCATC
AGCATCAAAGGCGGCCGGGAGAACAAGATGCCTATTCTCATTTCCAAGATCTTCAAGGGA
TTGGCAGCTGACCAGACAGAGGCCCTTTTTGTGGGGGATGCCATCCTGTCTGTGAATGGG
GAAGACTTGTCCTCTGCTACCCATGATGAGGCGGTGCAGGTCCTCAAGAAGACAGGCAAG
GAGGTGGTGCTGGAGGTCAAGTATATGAAGGACGTCTCACCGTATTTCAAGAACTCTACT
GGTGGGACCTCGGTCGGCTGGGACTCACCTCCTGCCTCACCCCTTCAGCGGCAGCCTTCC
TCCCCTGGCCCCACACCCCGGAACTTCAGCGAGGCCAAACACATGTCCTTGAAGATGGCA
TATGTCTCGAAGAGGTGCACCCCCAATGACCCGGAGCCCAGGTATCTGGAGATCTGCTCG
GCAGATGGTCAAGACACCCTCTTCCTGAGGGCCAAGGATGAGGCTAGTGCGAGGTCGTGG
GCGACTGCCATCCAAGCCCAGGTCAATACTCTGACGCCGCGGGTCAAGGATGAGCTGCAG
GCACTGTTGGCAGCCACCAGCACAGCTGGGAGCCAGGACATCAAGCAGATTGGCTGGCTA
ACTGAGCAGCTGCCCAGTGGGGGCACAGCCCCCACCCTGGCCCTGCTAACTGAAAAGGAA
CTGCTCCTCTACTTGTCTCTCCCCGAGACCCGCGAGGCCCTGAGCCGGCCAGCCCGTACT
GCCCCACTCATCGCCACCAGACTGGTGCACTCAGGCCCCTCCAAGGGCTCAGTGCCCTAC
GATGCAGAGCTCTCTTTTGCCCTGCGCACGGGCACGCGTCACGGTGTGGACACTCACCTG
TTCAGCGTGGAGTCACCGCAGGAGCTGGCTGCCTGGACCCGCCAGCTTGTGGATGGCTGT
CACCGGGCCGCCGAGGGTGTGCAGGAGGTGTCTACAGCCTGCACGTGGAATGGGCGTCCC
TGCAGCCTGTCTGTGCACATCGACAAGGGCTTCACACTGTGGGCGGCTGAGCCAGGTGCA
GCCCGAGCTGTGCTCCTGCGACAGCCCTTCGAGAAGCTGCAGATGTCTTCAGATGACGGT
GCCAGTCTCCTTTTCCTGGATTTTGGAGGTGCTGAAGGCGAGATCCAGCTGGACCTGCAC
TCGTGTCCCAAAACCATAGTCTTCATCATCCACTCCTTCCTGTCGGCCAAAGTCACCCGC
CTCGGGCTGTTGGCC

ORF Protein

Cloned ORF protein sequence for pFN21AB5917 Download

>KIBB5917  505 aa
MASGRRAPRTGLLELRAGAGSGAGGERWQRVLLSLAEDVLTVSPADGDPGPEPGAPREQE
PAQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKG
LAADQTEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGKEVVLEVKYMKDVSPYFKNST
GGTSVGWDSPPASPLQRQPSSPGPTPRNFSEAKHMSLKMAYVSKRCTPNDPEPRYLEICS
ADGQDTLFLRAKDEASARSWATAIQAQVNTLTPRVKDELQALLAATSTAGSQDIKQIGWL
TEQLPSGGTAPTLALLTEKELLLYLSLPETREALSRPARTAPLIATRLVHSGPSKGSVPY
DAELSFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRP
CSLSVHIDKGFTLWAAEPGAARAVLLRQPFEKLQMSSDDGASLLFLDFGGAEGEIQLDLH
SCPKTIVFIIHSFLSAKVTRLGLLA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5917 Download

>pFN21AB5917  6220 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGTCCGGCAGGCGCGCCCCGCGCACCGGGCT
GCTGGAGCTGCGCGCCGGGGCGGGCTCGGGGGCCGGCGGCGAGCGATGGCAGCGGGTGCT
GCTGAGTCTGGCGGAGGACGTGCTGACCGTGAGCCCCGCCGACGGCGACCCTGGTCCCGA
GCCCGGCGCTCCGCGGGAGCAGGAGCCCGCGCAGCTCAACGGCGCCGCGGAGCCGGGCGC
CGGGCCCCCGCAGCTGCCAGAGGCGCTACTGCTCCAGCGGCGCCGCGTGACGGTGCGCAA
GGCCGACGCCGGTGGGCTGGGCATCAGCATCAAAGGCGGCCGGGAGAACAAGATGCCTAT
TCTCATTTCCAAGATCTTCAAGGGATTGGCAGCTGACCAGACAGAGGCCCTTTTTGTGGG
GGATGCCATCCTGTCTGTGAATGGGGAAGACTTGTCCTCTGCTACCCATGATGAGGCGGT
GCAGGTCCTCAAGAAGACAGGCAAGGAGGTGGTGCTGGAGGTCAAGTATATGAAGGACGT
CTCACCGTATTTCAAGAACTCTACTGGTGGGACCTCGGTCGGCTGGGACTCACCTCCTGC
CTCACCCCTTCAGCGGCAGCCTTCCTCCCCTGGCCCCACACCCCGGAACTTCAGCGAGGC
CAAACACATGTCCTTGAAGATGGCATATGTCTCGAAGAGGTGCACCCCCAATGACCCGGA
GCCCAGGTATCTGGAGATCTGCTCGGCAGATGGTCAAGACACCCTCTTCCTGAGGGCCAA
GGATGAGGCTAGTGCGAGGTCGTGGGCGACTGCCATCCAAGCCCAGGTCAATACTCTGAC
GCCGCGGGTCAAGGATGAGCTGCAGGCACTGTTGGCAGCCACCAGCACAGCTGGGAGCCA
GGACATCAAGCAGATTGGCTGGCTAACTGAGCAGCTGCCCAGTGGGGGCACAGCCCCCAC
CCTGGCCCTGCTAACTGAAAAGGAACTGCTCCTCTACTTGTCTCTCCCCGAGACCCGCGA
GGCCCTGAGCCGGCCAGCCCGTACTGCCCCACTCATCGCCACCAGACTGGTGCACTCAGG
CCCCTCCAAGGGCTCAGTGCCCTACGATGCAGAGCTCTCTTTTGCCCTGCGCACGGGCAC
GCGTCACGGTGTGGACACTCACCTGTTCAGCGTGGAGTCACCGCAGGAGCTGGCTGCCTG
GACCCGCCAGCTTGTGGATGGCTGTCACCGGGCCGCCGAGGGTGTGCAGGAGGTGTCTAC
AGCCTGCACGTGGAATGGGCGTCCCTGCAGCCTGTCTGTGCACATCGACAAGGGCTTCAC
ACTGTGGGCGGCTGAGCCAGGTGCAGCCCGAGCTGTGCTCCTGCGACAGCCCTTCGAGAA
GCTGCAGATGTCTTCAGATGACGGTGCCAGTCTCCTTTTCCTGGATTTTGGAGGTGCTGA
AGGCGAGATCCAGCTGGACCTGCACTCGTGTCCCAAAACCATAGTCTTCATCATCCACTC
CTTCCTGTCGGCCAAAGTCACCCGCCTCGGGCTGTTGGCCGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT