STRBP ORF clone pFN21AB5567

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Halotag ORF Clone pFN21AB5567

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Clone info.

Species

human

Clone Name

pFN21AB5567 Sequence (with vector) Restriction Map

Product ID

FHC01534

Flexi Clone PID

FXC01534

ORF Sequence

DNA sequence (2016 bp)
Protein sequence (672 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385122]

Gene

KIBB5567

Symbol

STRBP

Alias : HEL162, ILF3L, SPNR, p74

Description

spermatid perinuclear RNA binding protein, transcript variant 1

Original Clone ID

ef05103

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2016 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 672 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6851.1 0 100.0 STRBP CCDS55337.1 0 100.0 STRBP CCDS45966.1 9.1e-134 57.7 ILF3 CCDS12247.1 9.2e-134 57.7 ILF3 CCDS12246.1 1.1e-133 57.7 ILF3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006561 87 333 PF07528 DZF IPR001159 393 450 PF00035 Double-stranded RNA-binding IPR001159 515 574 PF00035 Double-stranded RNA-binding HMMSmart IPR006561 81 334 SM00572 DZF IPR001159 388 452 SM00358 Double-stranded RNA-binding IPR001159 511 575 SM00358 Double-stranded RNA-binding ProfileScan IPR001159 387 453 PS50137 Double-stranded RNA-binding IPR001159 510 576 PS50137 Double-stranded RNA-binding
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016870383 672 611138 100.0 100.0 NP_060857 672 611138 100.0 100.0 XP_016870385 672 611138 100.0 100.0 XP_016870384 672 611138 100.0 100.0 NP_001164608 658 611138 100.0 97.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5567 Download

>KIBB5567  2016 bp
ATGAGATCTATTCGATCTTTTGCTAATGATGATCGCCATGTTATGGTGAAACATTCAACA
ATCTATCCATCTCCGGAGGAACTTGAAGCTGTTCAGAATATGGTATCTACTGTTGAATGT
GCTCTTAAACATGTCTCAGATTGGTTGGATGAAACAAATAAAGGCACAAAAACAGAGGGT
GAGACAGAAGTGAAGAAAGATGAGGCCGGAGAAAACTATTCCAAGGATCAAGGTGGTCGG
ACATTGTGTGGTGTAATGAGGATTGGCCTGGTTGCAAAAGGCTTGCTGATTAAAGATGAT
ATGGACTTGGAGCTGGTTTTAATGTGCAAAGACAAACCCACAGAGACCCTGTTAAATACA
GTCAAAGATAATCTTCCTATTCAGATTCAGAAACTCACAGAAGAGAAATATCAAGTGGAA
CAATGTGTAAATGAGGCATCTATTATAATTCGGAATACAAAAGAGCCCACGCTAACTTTG
AAGGTGATACTTACCTCACCTCTAATTAGGGACGAATTGGAGAAGAAGGATGGAGAAAAT
GTTTCGATGAAAGATCCTCCGGACTTATTGGACAGGCAGAAATGCCTGAACGCCTTGGCG
TCTCTTCGACATGCCAAATGGTTTCAGGCAAGGGCAAATGGATTAAAATCATGTGTAATT
GTCCTCCGCATTCTGCGTGATTTGTGCAACAGAGTCCCCACATGGGCACCATTGAAAGGA
TGGCCACTAGAACTTATATGTGAAAAGTCTATAGGTACTTGTAATAGACCTTTGGGCGCT
GGGGAGGCCTTGAGACGAGTAATGGAGTGTTTGGCATCTGGAATACTACTTCCTGGGGGT
CCTGGTCTTCATGATCCTTGTGAGCGAGACCCAACAGATGCTCTGAGCTATATGACCATC
CAGCAAAAAGAAGATATTACCCACAGTGCACAGCATGCACTCAGACTATCAGCCTTTGGT
CAGATTTACAAAGTGCTGGAGATGGACCCCCTTCCATCTAGTAAGCCTTTTCAGAAGTAT
TCCTGGTCAGTTACTGATAAAGAAGGTGCTGGGTCTTCAGCTCTAAAGAGGCCATTTGAA
GATGGATTAGGGGATGATAAAGACCCCAACAAGAAGATGAAACGAAACTTAAGGAAAATT
CTGGATAGTAAAGCAATAGACCTTATGAATGCACTAATGAGGCTAAATCAGATCAGGCCT
GGGCTTCAGTATAAGCTCCTATCTCAGTCTGGCCCCGTTCATGCCCCAGTCTTCACAATG
TCTGTAGATGTGGATGGCACAACATATGAAGCCTCAGGACCATCCAAGAAAACAGCAAAA
CTTCACGTAGCGGTGAAGGTATTGCAGGCAATGGGATATCCAACAGGCTTTGATGCAGAT
ATTGAATGTATGAGTTCCGATGAAAAATCAGATAATGAAAGTAAAAATGAAACAGTGTCT
TCAAACTCAAGCAATAATACTGGAAATTCTACAACTGAAACCTCCAGTACCTTAGAGGTA
AGAACTCAGGGCCCTATCCTCACAGCAAGTGGCAAAAACCCTGTAATGGAGCTCAATGAA
AAAAGAAGAGGTCTCAAGTATGAACTCATCTCAGAGACTGGTGGAAGCCATGACAAGCGC
TTTGTAATGGAGGTAGAAGTAGATGGACAGAAATTCAGAGGCGCAGGTCCAAATAAGAAA
GTGGCAAAGGCGAGTGCAGCTTTAGCTGCCTTGGAGAAACTGTTTTCTGGACCCAATGCG
GCAAATAATAAGAAAAAGAAGATTATCCCTCAGGCAAAGGGCGTTGTGAATACAGCTGTG
TCTGCAGCAGTCCAAGCTGTTCGGGGCAGAGGAAGAGGAACTCTAACAAGGGGAGCTTTT
GTTGGGGCGACAGCTGCTCCTGGCTACATAGCTCCAGGCTATGGAACACCATATGGTTAC
AGCACAGCTGCCCCTGCCTATGGTTTACCCAAGAGAATGGTTCTGTTACCCGTTATGAAA
TTTCCAACATATCCTGTTCCCCACTACTCATTCTTT

ORF Protein

Cloned ORF protein sequence for pFN21AB5567 Download

>KIBB5567  672 aa
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNKGTKTEG
ETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPTETLLNT
VKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDELEKKDGEN
VSMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKG
WPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERDPTDALSYMTI
QQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWSVTDKEGAGSSALKRPFE
DGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADIECMSSDEKSDNESKNETVS
SNSSNNTGNSTTETSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAV
SAAVQAVRGRGRGTLTRGAFVGATAAPGYIAPGYGTPYGYSTAAPAYGLPKRMVLLPVMK
FPTYPVPHYSFF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5567 Download

>pFN21AB5567  6721 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGATCTATTCGATCTTTTGCTAATGATGATCG
CCATGTTATGGTGAAACATTCAACAATCTATCCATCTCCGGAGGAACTTGAAGCTGTTCA
GAATATGGTATCTACTGTTGAATGTGCTCTTAAACATGTCTCAGATTGGTTGGATGAAAC
AAATAAAGGCACAAAAACAGAGGGTGAGACAGAAGTGAAGAAAGATGAGGCCGGAGAAAA
CTATTCCAAGGATCAAGGTGGTCGGACATTGTGTGGTGTAATGAGGATTGGCCTGGTTGC
AAAAGGCTTGCTGATTAAAGATGATATGGACTTGGAGCTGGTTTTAATGTGCAAAGACAA
ACCCACAGAGACCCTGTTAAATACAGTCAAAGATAATCTTCCTATTCAGATTCAGAAACT
CACAGAAGAGAAATATCAAGTGGAACAATGTGTAAATGAGGCATCTATTATAATTCGGAA
TACAAAAGAGCCCACGCTAACTTTGAAGGTGATACTTACCTCACCTCTAATTAGGGACGA
ATTGGAGAAGAAGGATGGAGAAAATGTTTCGATGAAAGATCCTCCGGACTTATTGGACAG
GCAGAAATGCCTGAACGCCTTGGCGTCTCTTCGACATGCCAAATGGTTTCAGGCAAGGGC
AAATGGATTAAAATCATGTGTAATTGTCCTCCGCATTCTGCGTGATTTGTGCAACAGAGT
CCCCACATGGGCACCATTGAAAGGATGGCCACTAGAACTTATATGTGAAAAGTCTATAGG
TACTTGTAATAGACCTTTGGGCGCTGGGGAGGCCTTGAGACGAGTAATGGAGTGTTTGGC
ATCTGGAATACTACTTCCTGGGGGTCCTGGTCTTCATGATCCTTGTGAGCGAGACCCAAC
AGATGCTCTGAGCTATATGACCATCCAGCAAAAAGAAGATATTACCCACAGTGCACAGCA
TGCACTCAGACTATCAGCCTTTGGTCAGATTTACAAAGTGCTGGAGATGGACCCCCTTCC
ATCTAGTAAGCCTTTTCAGAAGTATTCCTGGTCAGTTACTGATAAAGAAGGTGCTGGGTC
TTCAGCTCTAAAGAGGCCATTTGAAGATGGATTAGGGGATGATAAAGACCCCAACAAGAA
GATGAAACGAAACTTAAGGAAAATTCTGGATAGTAAAGCAATAGACCTTATGAATGCACT
AATGAGGCTAAATCAGATCAGGCCTGGGCTTCAGTATAAGCTCCTATCTCAGTCTGGCCC
CGTTCATGCCCCAGTCTTCACAATGTCTGTAGATGTGGATGGCACAACATATGAAGCCTC
AGGACCATCCAAGAAAACAGCAAAACTTCACGTAGCGGTGAAGGTATTGCAGGCAATGGG
ATATCCAACAGGCTTTGATGCAGATATTGAATGTATGAGTTCCGATGAAAAATCAGATAA
TGAAAGTAAAAATGAAACAGTGTCTTCAAACTCAAGCAATAATACTGGAAATTCTACAAC
TGAAACCTCCAGTACCTTAGAGGTAAGAACTCAGGGCCCTATCCTCACAGCAAGTGGCAA
AAACCCTGTAATGGAGCTCAATGAAAAAAGAAGAGGTCTCAAGTATGAACTCATCTCAGA
GACTGGTGGAAGCCATGACAAGCGCTTTGTAATGGAGGTAGAAGTAGATGGACAGAAATT
CAGAGGCGCAGGTCCAAATAAGAAAGTGGCAAAGGCGAGTGCAGCTTTAGCTGCCTTGGA
GAAACTGTTTTCTGGACCCAATGCGGCAAATAATAAGAAAAAGAAGATTATCCCTCAGGC
AAAGGGCGTTGTGAATACAGCTGTGTCTGCAGCAGTCCAAGCTGTTCGGGGCAGAGGAAG
AGGAACTCTAACAAGGGGAGCTTTTGTTGGGGCGACAGCTGCTCCTGGCTACATAGCTCC
AGGCTATGGAACACCATATGGTTACAGCACAGCTGCCCCTGCCTATGGTTTACCCAAGAG
AATGGTTCTGTTACCCGTTATGAAATTTCCAACATATCCTGTTCCCCACTACTCATTCTT
TGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T