STRBP ORF clone FXC01534

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Flexi ORF Clone FXC01534

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Clone info.

Species

human

Clone Name

pF1KB5567 Sequence (with vector) Restriction Map

Product ID

FXC01534

HaloTag Clone PID

FHC01534

ORF Sequence

DNA sequence (2016 bp)
Protein sequence (672 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385122]

Gene

KIBB5567

Symbol

STRBP

Alias : HEL162, ILF3L, SPNR, p74

Description

spermatid perinuclear RNA binding protein, transcript variant 1

Original Clone ID

ef05103

Features of the cloned ORF sequence

Description

Length: 2016 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 672 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6851.1 0 100.0 STRBP CCDS55337.1 0 100.0 STRBP CCDS45966.1 9.1e-134 57.7 ILF3 CCDS12247.1 9.2e-134 57.7 ILF3 CCDS12246.1 1.1e-133 57.7 ILF3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006561 87 333 PF07528 DZF IPR001159 393 450 PF00035 Double-stranded RNA-binding IPR001159 515 574 PF00035 Double-stranded RNA-binding HMMSmart IPR006561 81 334 SM00572 DZF IPR001159 388 452 SM00358 Double-stranded RNA-binding IPR001159 511 575 SM00358 Double-stranded RNA-binding ProfileScan IPR001159 387 453 PS50137 Double-stranded RNA-binding IPR001159 510 576 PS50137 Double-stranded RNA-binding
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016870383 672 611138 100.0 100.0 NP_060857 672 611138 100.0 100.0 XP_016870385 672 611138 100.0 100.0 XP_016870384 672 611138 100.0 100.0 NP_001164608 658 611138 100.0 97.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5567 Download

>KIBB5567  2016 bp
ATGAGATCTATTCGATCTTTTGCTAATGATGATCGCCATGTTATGGTGAAACATTCAACA
ATCTATCCATCTCCGGAGGAACTTGAAGCTGTTCAGAATATGGTATCTACTGTTGAATGT
GCTCTTAAACATGTCTCAGATTGGTTGGATGAAACAAATAAAGGCACAAAAACAGAGGGT
GAGACAGAAGTGAAGAAAGATGAGGCCGGAGAAAACTATTCCAAGGATCAAGGTGGTCGG
ACATTGTGTGGTGTAATGAGGATTGGCCTGGTTGCAAAAGGCTTGCTGATTAAAGATGAT
ATGGACTTGGAGCTGGTTTTAATGTGCAAAGACAAACCCACAGAGACCCTGTTAAATACA
GTCAAAGATAATCTTCCTATTCAGATTCAGAAACTCACAGAAGAGAAATATCAAGTGGAA
CAATGTGTAAATGAGGCATCTATTATAATTCGGAATACAAAAGAGCCCACGCTAACTTTG
AAGGTGATACTTACCTCACCTCTAATTAGGGACGAATTGGAGAAGAAGGATGGAGAAAAT
GTTTCGATGAAAGATCCTCCGGACTTATTGGACAGGCAGAAATGCCTGAACGCCTTGGCG
TCTCTTCGACATGCCAAATGGTTTCAGGCAAGGGCAAATGGATTAAAATCATGTGTAATT
GTCCTCCGCATTCTGCGTGATTTGTGCAACAGAGTCCCCACATGGGCACCATTGAAAGGA
TGGCCACTAGAACTTATATGTGAAAAGTCTATAGGTACTTGTAATAGACCTTTGGGCGCT
GGGGAGGCCTTGAGACGAGTAATGGAGTGTTTGGCATCTGGAATACTACTTCCTGGGGGT
CCTGGTCTTCATGATCCTTGTGAGCGAGACCCAACAGATGCTCTGAGCTATATGACCATC
CAGCAAAAAGAAGATATTACCCACAGTGCACAGCATGCACTCAGACTATCAGCCTTTGGT
CAGATTTACAAAGTGCTGGAGATGGACCCCCTTCCATCTAGTAAGCCTTTTCAGAAGTAT
TCCTGGTCAGTTACTGATAAAGAAGGTGCTGGGTCTTCAGCTCTAAAGAGGCCATTTGAA
GATGGATTAGGGGATGATAAAGACCCCAACAAGAAGATGAAACGAAACTTAAGGAAAATT
CTGGATAGTAAAGCAATAGACCTTATGAATGCACTAATGAGGCTAAATCAGATCAGGCCT
GGGCTTCAGTATAAGCTCCTATCTCAGTCTGGCCCCGTTCATGCCCCAGTCTTCACAATG
TCTGTAGATGTGGATGGCACAACATATGAAGCCTCAGGACCATCCAAGAAAACAGCAAAA
CTTCACGTAGCGGTGAAGGTATTGCAGGCAATGGGATATCCAACAGGCTTTGATGCAGAT
ATTGAATGTATGAGTTCCGATGAAAAATCAGATAATGAAAGTAAAAATGAAACAGTGTCT
TCAAACTCAAGCAATAATACTGGAAATTCTACAACTGAAACCTCCAGTACCTTAGAGGTA
AGAACTCAGGGCCCTATCCTCACAGCAAGTGGCAAAAACCCTGTAATGGAGCTCAATGAA
AAAAGAAGAGGTCTCAAGTATGAACTCATCTCAGAGACTGGTGGAAGCCATGACAAGCGC
TTTGTAATGGAGGTAGAAGTAGATGGACAGAAATTCAGAGGCGCAGGTCCAAATAAGAAA
GTGGCAAAGGCGAGTGCAGCTTTAGCTGCCTTGGAGAAACTGTTTTCTGGACCCAATGCG
GCAAATAATAAGAAAAAGAAGATTATCCCTCAGGCAAAGGGCGTTGTGAATACAGCTGTG
TCTGCAGCAGTCCAAGCTGTTCGGGGCAGAGGAAGAGGAACTCTAACAAGGGGAGCTTTT
GTTGGGGCGACAGCTGCTCCTGGCTACATAGCTCCAGGCTATGGAACACCATATGGTTAC
AGCACAGCTGCCCCTGCCTATGGTTTACCCAAGAGAATGGTTCTGTTACCCGTTATGAAA
TTTCCAACATATCCTGTTCCCCACTACTCATTCTTT

ORF Protein

Cloned ORF protein sequence for pF1KB5567 Download

>KIBB5567  672 aa
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNKGTKTEG
ETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPTETLLNT
VKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDELEKKDGEN
VSMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKG
WPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERDPTDALSYMTI
QQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWSVTDKEGAGSSALKRPFE
DGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADIECMSSDEKSDNESKNETVS
SNSSNNTGNSTTETSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAV
SAAVQAVRGRGRGTLTRGAFVGATAAPGYIAPGYGTPYGYSTAAPAYGLPKRMVLLPVMK
FPTYPVPHYSFF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5567 Download

>pF1KB5567  5129 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGATCTATT
CGATCTTTTGCTAATGATGATCGCCATGTTATGGTGAAACATTCAACAATCTATCCATCT
CCGGAGGAACTTGAAGCTGTTCAGAATATGGTATCTACTGTTGAATGTGCTCTTAAACAT
GTCTCAGATTGGTTGGATGAAACAAATAAAGGCACAAAAACAGAGGGTGAGACAGAAGTG
AAGAAAGATGAGGCCGGAGAAAACTATTCCAAGGATCAAGGTGGTCGGACATTGTGTGGT
GTAATGAGGATTGGCCTGGTTGCAAAAGGCTTGCTGATTAAAGATGATATGGACTTGGAG
CTGGTTTTAATGTGCAAAGACAAACCCACAGAGACCCTGTTAAATACAGTCAAAGATAAT
CTTCCTATTCAGATTCAGAAACTCACAGAAGAGAAATATCAAGTGGAACAATGTGTAAAT
GAGGCATCTATTATAATTCGGAATACAAAAGAGCCCACGCTAACTTTGAAGGTGATACTT
ACCTCACCTCTAATTAGGGACGAATTGGAGAAGAAGGATGGAGAAAATGTTTCGATGAAA
GATCCTCCGGACTTATTGGACAGGCAGAAATGCCTGAACGCCTTGGCGTCTCTTCGACAT
GCCAAATGGTTTCAGGCAAGGGCAAATGGATTAAAATCATGTGTAATTGTCCTCCGCATT
CTGCGTGATTTGTGCAACAGAGTCCCCACATGGGCACCATTGAAAGGATGGCCACTAGAA
CTTATATGTGAAAAGTCTATAGGTACTTGTAATAGACCTTTGGGCGCTGGGGAGGCCTTG
AGACGAGTAATGGAGTGTTTGGCATCTGGAATACTACTTCCTGGGGGTCCTGGTCTTCAT
GATCCTTGTGAGCGAGACCCAACAGATGCTCTGAGCTATATGACCATCCAGCAAAAAGAA
GATATTACCCACAGTGCACAGCATGCACTCAGACTATCAGCCTTTGGTCAGATTTACAAA
GTGCTGGAGATGGACCCCCTTCCATCTAGTAAGCCTTTTCAGAAGTATTCCTGGTCAGTT
ACTGATAAAGAAGGTGCTGGGTCTTCAGCTCTAAAGAGGCCATTTGAAGATGGATTAGGG
GATGATAAAGACCCCAACAAGAAGATGAAACGAAACTTAAGGAAAATTCTGGATAGTAAA
GCAATAGACCTTATGAATGCACTAATGAGGCTAAATCAGATCAGGCCTGGGCTTCAGTAT
AAGCTCCTATCTCAGTCTGGCCCCGTTCATGCCCCAGTCTTCACAATGTCTGTAGATGTG
GATGGCACAACATATGAAGCCTCAGGACCATCCAAGAAAACAGCAAAACTTCACGTAGCG
GTGAAGGTATTGCAGGCAATGGGATATCCAACAGGCTTTGATGCAGATATTGAATGTATG
AGTTCCGATGAAAAATCAGATAATGAAAGTAAAAATGAAACAGTGTCTTCAAACTCAAGC
AATAATACTGGAAATTCTACAACTGAAACCTCCAGTACCTTAGAGGTAAGAACTCAGGGC
CCTATCCTCACAGCAAGTGGCAAAAACCCTGTAATGGAGCTCAATGAAAAAAGAAGAGGT
CTCAAGTATGAACTCATCTCAGAGACTGGTGGAAGCCATGACAAGCGCTTTGTAATGGAG
GTAGAAGTAGATGGACAGAAATTCAGAGGCGCAGGTCCAAATAAGAAAGTGGCAAAGGCG
AGTGCAGCTTTAGCTGCCTTGGAGAAACTGTTTTCTGGACCCAATGCGGCAAATAATAAG
AAAAAGAAGATTATCCCTCAGGCAAAGGGCGTTGTGAATACAGCTGTGTCTGCAGCAGTC
CAAGCTGTTCGGGGCAGAGGAAGAGGAACTCTAACAAGGGGAGCTTTTGTTGGGGCGACA
GCTGCTCCTGGCTACATAGCTCCAGGCTATGGAACACCATATGGTTACAGCACAGCTGCC
CCTGCCTATGGTTTACCCAAGAGAATGGTTCTGTTACCCGTTATGAAATTTCCAACATAT
CCTGTTCCCCACTACTCATTCTTTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGT
GAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTG
AGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGT
AATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCA
AGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATAC
TGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTAC
ATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCT
TACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGG
GGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACA
GCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGT
AAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTA
TCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTC
GTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGC
CTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAA
CCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT