HTATSF1 ORF clone pFN21AB4189

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB4189

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Clone info.

Species

human

Clone Name

pFN21AB4189 Sequence (with vector) Restriction Map

Product ID

FHC13802

ORF Sequence

DNA sequence (2265 bp)
Protein sequence (755 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB4189

Symbol

HTATSF1

Alias : TAT-SF1, TATSF1, dJ196E23.2

Description

HIV-1 Tat specific factor 1, transcript variant 2

Original Clone ID

oc95756

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

Features of the cloned ORF sequence

Description

Length: 2265 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 755 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14657.1 4e-141 100.0 HTATSF1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 135 212 PF00076 RNA recognition motif domain IPR000504 289 343 PF00076 RNA recognition motif domain HMMSmart IPR000504 134 214 SM00360 RNA recognition motif domain IPR000504 265 345 SM00360 RNA recognition motif domain ProfileScan IPR000504 133 218 PS50102 RNA recognition motif domain IPR000504 264 349 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005262461 755 300346 100.0 100.0 NP_001156752 755 300346 100.0 100.0 NP_055315 755 300346 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB4189 Download

>KIBB4189  2265 bp
ATGAGCGGCACCAACTTGGATGGGAACGATGAGTTTGATGAGCAGTTGCGAATGCAAGAA
TTGTACGGAGACGGCAAGGATGGTGACACCCAGACCGATGCCGGCGGAGAACCCGATTCT
CTCGGGCAGCAGCCGACGGACACTCCCTACGAGTGGGACCTGGACAAAAAGGCTTGGTTC
CCCAAGATTACTGAAGATTTCATTGCTACATATCAGGCCAATTATGGCTTCTCTAACGAT
GGCGCATCTAGTTCTACCGCAAATGTTGAAGATGTCCATGCTAGGACTGCAGAGGAACCT
CCACAAGAAAAAGCCCCGGAACCCACTGATGCCAGAAAGAAGGGAGAAAAAAGAAAGGCT
GAGTCAGGATGGTTTCATGTTGAAGAAGACAGAAATACAAATGTATACGTGTCTGGTTTG
CCTCCAGATATTACAGTGGATGAATTTATACAACTTATGTCCAAGTTTGGCATTATTATG
AGAGATCCTCAGACAGAAGAATTTAAGGTCAAACTTTACAAAGATAATCAAGGAAATCTT
AAAGGAGACGGTCTTTGCTGTTATTTGAAAAGAGAATCTGTGGAACTTGCATTAAAACTT
TTGGATGAAGATGAAATTAGAGGCTACAAATTACATGTTGAGGTGGCAAAGTTTCAACTG
AAGGGAGAATATGATGCCTCAAAGAAGAAGAAGAAGTGCAAAGACTATAAGAAGAAGCTG
TCTATGCAACAAAAGCAGTTGGATTGGAGACCTGAGAGGCGAGCCGGACCATCCCGGATG
CGCCATGAGCGAGTTGTCATCATCAAGAATATGTTTCATCCTATGGATTTTGAGGATGAT
CCGTTGGTGCTGAATGAGATCAGAGAAGACCTTCGAGTAGAGTGTTCGAAGTTTGGACAA
ATTAGGAAACTCCTTCTCTTTGATAGGCACCCAGATGGTGTGGCCTCTGTGTCCTTTCGG
GATCCAGAGGAAGCTGATTATTGTATTCAGACTCTCGATGGAAGATGGTTTGGTGGCCGT
CAAATCACTGCCCAGGCATGGGATGGGACTACAGATTATCAGGTGGAGGAAACCTCAAGA
GAAAGGGAGGAAAGGCTGAGAGGATGGGAGGCTTTCCTCAATGCTCCTGAGGCCAACAGA
GGCCTTAGGCGTTCAGATTCTGTCTCTGCTTCCGAAAGGGCAGGGCCTTCTAGAGCAAGG
CATTTTTCAGAGCACCCCAGCACATCTAAAATGAATGCTCAAGAAACTGCAACTGGAATG
GCGTTTGAAGAACCTATAGATGAGAAGAAGTTTGAAAAGACAGAAGATGGGGGAGAATTT
GAAGAAGGTGCTTCTGAAAACAATGCTAAGGAAAGTAGCCCCGAAAAAGAGGCTGAAGAA
GGCTGCCCTGAAAAAGAATCTGAAGAGGGCTGCCCCAAAAGAGGGTTTGAAGGCAGCTGC
TCCCAAAAAGAGTCTGAAGAAGGCAATCCCGTAAGAGGATCTGAAGAGGATAGTCCTAAA
AAAGAGTCTAAAAAGAAGACACTCAAAAATGATTGTGAAGAGAATGGCCTTGCAAAGGAA
TCTGAAGATGACCTCAACAAGGAGTCTGAAGAGGAGGTTGGCCCCACAAAAGAGTCCGAA
GAAGATGACTCAGAGAAAGAGTCTGATGAAGACTGCTCTGAAAAACAGTCTGAAGATGGC
TCCGAAAGAGAATTTGAAGAAAATGGTCTCGAGAAAGATTTGGACGAGGAAGGTTCTGAA
AAGGAGCTTCATGAAAATGTTCTTGACAAAGAGTTAGAAGAAAATGACTCTGAAAACTCC
GAATTTGAAGATGACGGCTCTGAAAAAGTGTTAGATGAGGAAGGCTCTGAGAGAGAGTTT
GACGAAGATTCAGATGAAAAGGAAGAAGAGGAGGATACATATGAAAAAGTATTTGATGAT
GAGTCTGATGAGAAAGAGGATGAAGAATATGCAGATGAAAAGGGGCTTGAAGCTGCTGAT
AAAAAGGCGGAAGAAGGTGATGCAGATGAAAAGCTGTTTGAAGAGTCAGATGACAAGGAA
GATGAAGATGCAGATGGAAAGGAAGTTGAAGATGCTGACGAAAAGTTGTTCGAAGATGAT
GATTCCAATGAGAAGTTGTTTGATGAGGAGGAAGATTCCAGTGAGAAGTTGTTTGACGAT
TCTGATGAGAGGGGGACTTTGGGTGGTTTTGGGAGTGTTGAAGAAGGGCCCCTATCCACT
GGCAGCAGCTTTATTCTCAGTAGCGATGATGATGACGATGATATT

ORF Protein

Cloned ORF protein sequence for pFN21AB4189 Download

>KIBB4189  755 aa
MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKKAWF
PKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEKRKA
ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNL
KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL
SMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQ
IRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSR
EREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGM
AFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSC
SQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESE
EDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENS
EFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAAD
KKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDD
SDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB4189 Download

>pFN21AB4189  6970 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCGGCACCAACTTGGATGGGAACGATGAGTT
TGATGAGCAGTTGCGAATGCAAGAATTGTACGGAGACGGCAAGGATGGTGACACCCAGAC
CGATGCCGGCGGAGAACCCGATTCTCTCGGGCAGCAGCCGACGGACACTCCCTACGAGTG
GGACCTGGACAAAAAGGCTTGGTTCCCCAAGATTACTGAAGATTTCATTGCTACATATCA
GGCCAATTATGGCTTCTCTAACGATGGCGCATCTAGTTCTACCGCAAATGTTGAAGATGT
CCATGCTAGGACTGCAGAGGAACCTCCACAAGAAAAAGCCCCGGAACCCACTGATGCCAG
AAAGAAGGGAGAAAAAAGAAAGGCTGAGTCAGGATGGTTTCATGTTGAAGAAGACAGAAA
TACAAATGTATACGTGTCTGGTTTGCCTCCAGATATTACAGTGGATGAATTTATACAACT
TATGTCCAAGTTTGGCATTATTATGAGAGATCCTCAGACAGAAGAATTTAAGGTCAAACT
TTACAAAGATAATCAAGGAAATCTTAAAGGAGACGGTCTTTGCTGTTATTTGAAAAGAGA
ATCTGTGGAACTTGCATTAAAACTTTTGGATGAAGATGAAATTAGAGGCTACAAATTACA
TGTTGAGGTGGCAAAGTTTCAACTGAAGGGAGAATATGATGCCTCAAAGAAGAAGAAGAA
GTGCAAAGACTATAAGAAGAAGCTGTCTATGCAACAAAAGCAGTTGGATTGGAGACCTGA
GAGGCGAGCCGGACCATCCCGGATGCGCCATGAGCGAGTTGTCATCATCAAGAATATGTT
TCATCCTATGGATTTTGAGGATGATCCGTTGGTGCTGAATGAGATCAGAGAAGACCTTCG
AGTAGAGTGTTCGAAGTTTGGACAAATTAGGAAACTCCTTCTCTTTGATAGGCACCCAGA
TGGTGTGGCCTCTGTGTCCTTTCGGGATCCAGAGGAAGCTGATTATTGTATTCAGACTCT
CGATGGAAGATGGTTTGGTGGCCGTCAAATCACTGCCCAGGCATGGGATGGGACTACAGA
TTATCAGGTGGAGGAAACCTCAAGAGAAAGGGAGGAAAGGCTGAGAGGATGGGAGGCTTT
CCTCAATGCTCCTGAGGCCAACAGAGGCCTTAGGCGTTCAGATTCTGTCTCTGCTTCCGA
AAGGGCAGGGCCTTCTAGAGCAAGGCATTTTTCAGAGCACCCCAGCACATCTAAAATGAA
TGCTCAAGAAACTGCAACTGGAATGGCGTTTGAAGAACCTATAGATGAGAAGAAGTTTGA
AAAGACAGAAGATGGGGGAGAATTTGAAGAAGGTGCTTCTGAAAACAATGCTAAGGAAAG
TAGCCCCGAAAAAGAGGCTGAAGAAGGCTGCCCTGAAAAAGAATCTGAAGAGGGCTGCCC
CAAAAGAGGGTTTGAAGGCAGCTGCTCCCAAAAAGAGTCTGAAGAAGGCAATCCCGTAAG
AGGATCTGAAGAGGATAGTCCTAAAAAAGAGTCTAAAAAGAAGACACTCAAAAATGATTG
TGAAGAGAATGGCCTTGCAAAGGAATCTGAAGATGACCTCAACAAGGAGTCTGAAGAGGA
GGTTGGCCCCACAAAAGAGTCCGAAGAAGATGACTCAGAGAAAGAGTCTGATGAAGACTG
CTCTGAAAAACAGTCTGAAGATGGCTCCGAAAGAGAATTTGAAGAAAATGGTCTCGAGAA
AGATTTGGACGAGGAAGGTTCTGAAAAGGAGCTTCATGAAAATGTTCTTGACAAAGAGTT
AGAAGAAAATGACTCTGAAAACTCCGAATTTGAAGATGACGGCTCTGAAAAAGTGTTAGA
TGAGGAAGGCTCTGAGAGAGAGTTTGACGAAGATTCAGATGAAAAGGAAGAAGAGGAGGA
TACATATGAAAAAGTATTTGATGATGAGTCTGATGAGAAAGAGGATGAAGAATATGCAGA
TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAGGTGATGCAGATGAAAAGCT
GTTTGAAGAGTCAGATGACAAGGAAGATGAAGATGCAGATGGAAAGGAAGTTGAAGATGC
TGACGAAAAGTTGTTCGAAGATGATGATTCCAATGAGAAGTTGTTTGATGAGGAGGAAGA
TTCCAGTGAGAAGTTGTTTGACGATTCTGATGAGAGGGGGACTTTGGGTGGTTTTGGGAG
TGTTGAAGAAGGGCCCCTATCCACTGGCAGCAGCTTTATTCTCAGTAGCGATGATGATGA
CGATGATATTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT