FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB4189, 755 aa 1>>>pF1KB4189 755 - 755 aa - 755 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.2026+/-0.00125; mu= -0.7831+/- 0.075 mean_var=372.9315+/-74.425, 0's: 0 Z-trim(111.8): 66 B-trim: 0 in 0/53 Lambda= 0.066414 statistics sampled from 12644 (12685) to 12644 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.39), width: 16 Scan time: 2.690 The best scores are: opt bits E(32554) CCDS14657.1 HTATSF1 gene_id:27336|Hs108|chrX ( 755) 5068 500.5 4e-141 >>CCDS14657.1 HTATSF1 gene_id:27336|Hs108|chrX (755 aa) initn: 5068 init1: 5068 opt: 5068 Z-score: 2647.1 bits: 500.5 E(32554): 4e-141 Smith-Waterman score: 5068; 100.0% identity (100.0% similar) in 755 aa overlap (1-755:1-755) 10 20 30 40 50 60 pF1KB4 MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKKAWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKKAWF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB4 PKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEKRKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEKRKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB4 ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB4 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB4 SMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB4 IRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 IRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB4 EREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGM 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB4 AFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 AFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSC 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB4 SQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB4 EDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENS 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB4 EFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAAD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB4 KKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 KKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDD 670 680 690 700 710 720 730 740 750 pF1KB4 SDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI ::::::::::::::::::::::::::::::::::: CCDS14 SDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI 730 740 750 755 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:56:04 2016 done: Tue Nov 8 04:56:04 2016 Total Scan time: 2.690 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]