PATZ1 ORF clone pFN21AB3020

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB3020

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Clone info.

Species

human

Clone Name

pFN21AB3020 Sequence (with vector) Restriction Map

Product ID

FHC01717

Flexi Clone PID

FXC01717

ORF Sequence

DNA sequence (1923 bp)
Protein sequence (641 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384725]

Gene

KIBB3020

Symbol

PATZ1

Alias : MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23

Description

POZ (BTB) and AT hook containing zinc finger 1, transcript variant 2

Original Clone ID

ha03335

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1923 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 641 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13895.1 1.5e-137 99.8 PATZ1 CCDS46691.1 9.9e-107 95.5 PATZ1 CCDS13894.1 1.2e-106 93.0 PATZ1 CCDS13896.1 3.2e-93 99.8 PATZ1 CCDS61902.1 4e-23 40.7 MAZ The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013069 30 159 PF00651 BTB/POZ IPR007087 413 436 PF00096 Zinc finger IPR007087 559 582 PF00096 Zinc finger HMMSmart IPR000210 41 160 SM00225 BTB/POZ-like IPR015880 292 314 SM00355 Zinc finger IPR015880 355 377 SM00355 Zinc finger IPR015880 383 405 SM00355 Zinc finger IPR015880 413 436 SM00355 Zinc finger IPR015880 442 464 SM00355 Zinc finger IPR015880 468 489 SM00355 Zinc finger IPR015880 559 582 SM00355 Zinc finger ProfileScan IPR000210 41 130 PS50097 BTB/POZ-like IPR007087 292 314 PS50157 Zinc finger IPR007087 355 382 PS50157 Zinc finger IPR007087 383 410 PS50157 Zinc finger IPR007087 413 441 PS50157 Zinc finger IPR007087 442 469 PS50157 Zinc finger IPR007087 559 582 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_114439 641 605165 99.8 100.0 NP_114441 537 605165 95.5 83.0 NP_055138 687 605165 93.0 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB3020 Download

>KIBB3020  1923 bp
ATGGAGCGGGTGAACGACGCTTCGTGCGGCCCGTCTGGCTGCTACACATACCAGGTGAGC
AGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTC
TGCGACGTGCTCTTGCGGGTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTGCTGGCC
GCCTGCAGCGAGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGGAGCTGCG
GACGGGGGTCCGGCTGATGTAGGGGGCGCGACGGCAGCACCAGGCGGCGGGGCCGGGGGC
AGCCGGGAGCTGGAGATGCACACTATCAGCTCCAAGGTATTTGGGGACATTCTGGACTTC
GCCTACACTTCCCGCATCGTGGTGCGCTTGGAGAGCTTTCCCGAACTCATGACGGCCGCC
AAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAAC
GTACAGATCCTGGTACCCCCTGCCCGCGCCGATATAATGCTCTTTCGCCCCCCTGGGACC
TCGGACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAAT
GGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATT
GCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGTGGACCGCTTGCCCATGGTGGCTGGA
CCCCTATCCCCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTGCCCCTCCC
CTGACTGGCAAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTGCTGGACTCAATGTTT
GGGTCCCCAGGGGGCCTGAGGGAGGCAGGCACCCTTCCATGCGGTCTATGTGGTAAGGTG
TTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAG
CTGGGCTACATCGACCTTCCTCCTCCGAGGCTGGGTGAGAATGGGCTACCCATCTCTGAA
GACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGC
GGCAAGATCTTCCGTGATGTGTATCATCTTAACCGGCACAAGCTGTCCCACTCTGGGGAG
AAGCCCTACTCCTGCCCTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCATGTCCTAC
CATGTGCGGTCCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCCAGAGCTGTGGGAAA
GGCTTCTCCAGGCCTGATCACTTGAACGGACATATCAAGCAGGTGCACACTTCTGAGCGG
CCTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGCGCTCCCAC
CTGGCCTGTCATGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCA
TACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGT
AACCGAGAAGGCCAGAAATGCTCACATCAGGATCCGATTGAGAGCTCTGACTCCTATGGT
GACCTCTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTC
TCCTGCGACATGGCAGTCCCCAAAAACAAAATGGAGTCTGATGGGGAGAAGAAGTACCCA
TGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCCTACTTGAACAAACACATCCAGAAG
GTGCATGTCCGGGCTCTCGGGGGCCCCCTGGGGGACCTGGGCCCTGCCCTTGGCTCACCT
TTCTCTCCTCAGCAGAACATGTCTCTCCTCGAGTCCTTTGGGTTTCAGATTGTTCAGTCG
GCATTTGCGTCATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGG
AAA

ORF Protein

Cloned ORF protein sequence for pFN21AB3020 Download

>KIBB3020  641 aa
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA
ACSEYFESVFSAQLGDGGAADGGPADVGGATAAPGGGAGGSRELEMHTISSKVFGDILDF
AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT
SDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAG
PLSPQLLTSPFPSVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGTLPCGLCGKV
FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC
GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK
GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA
YMADHLKKHSEGPSNFCSICNREGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSF
SCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSP
FSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEGK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB3020 Download

>pFN21AB3020  6628 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGCGGGTGAACGACGCTTCGTGCGGCCCGTC
TGGCTGCTACACATACCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCA
GCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTTGCGGGTAGGCGACGAGAGCTT
CCCAGCGCACCGCGCCGTGCTGGCCGCCTGCAGCGAGTACTTTGAGTCGGTGTTCAGCGC
CCAGTTGGGCGACGGCGGAGCTGCGGACGGGGGTCCGGCTGATGTAGGGGGCGCGACGGC
AGCACCAGGCGGCGGGGCCGGGGGCAGCCGGGAGCTGGAGATGCACACTATCAGCTCCAA
GGTATTTGGGGACATTCTGGACTTCGCCTACACTTCCCGCATCGTGGTGCGCTTGGAGAG
CTTTCCCGAACTCATGACGGCCGCCAAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTG
CCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTGGTACCCCCTGCCCGCGCCGATAT
AATGCTCTTTCGCCCCCCTGGGACCTCGGACTTGGGCTTCCCTTTGGACATGACCAACGG
GGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGC
AGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGT
GGACCGCTTGCCCATGGTGGCTGGACCCCTATCCCCCCAACTGCTGACTTCCCCATTCCC
CAGTGTGGCATCCAGTGCCCCTCCCCTGACTGGCAAGCGAGGCCGGGGCCGCCCAAGGAA
GGCCAACCTGCTGGACTCAATGTTTGGGTCCCCAGGGGGCCTGAGGGAGGCAGGCACCCT
TCCATGCGGTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCACGAGGC
CCAGCACGGTGTCACCAGCCTCCAGCTGGGCTACATCGACCTTCCTCCTCCGAGGCTGGG
TGAGAATGGGCTACCCATCTCTGAAGACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAG
GAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATGTGTATCATCTTAACCG
GCACAAGCTGTCCCACTCTGGGGAGAAGCCCTACTCCTGCCCTGTGTGTGGGTTGCGGTT
CAAGAGAAAAGACCGCATGTCCTACCATGTGCGGTCCCATGATGGGTCCGTGGGCAAGCC
TTACATCTGCCAGAGCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGAACGGACATAT
CAAGCAGGTGCACACTTCTGAGCGGCCTCACAAGTGTCAGACCTGCAATGCTTCTTTTGC
CACCCGAGACCGTCTGCGCTCCCACCTGGCCTGTCATGAAGACAAGGTGCCCTGCCAGGT
GTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGG
GCCCAGCAACTTCTGCAGTATCTGTAACCGAGAAGGCCAGAAATGCTCACATCAGGATCC
GATTGAGAGCTCTGACTCCTATGGTGACCTCTCAGATGCCAGCGACCTGAAGACGCCAGA
GAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGACATGGCAGTCCCCAAAAACAAAATGGA
GTCTGATGGGGAGAAGAAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTC
CTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGGGGGCCCCCTGGGGGA
CCTGGGCCCTGCCCTTGGCTCACCTTTCTCTCCTCAGCAGAACATGTCTCTCCTCGAGTC
CTTTGGGTTTCAGATTGTTCAGTCGGCATTTGCGTCATCTTTAGTAGATCCTGAGGTTGA
CCAGCAGCCCATGGGGCCTGAAGGGAAAGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT