NKX1-2 ORF clone pFN21AB0985

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB0985

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Clone info.

Species

human

Clone Name

pFN21AB0985 Sequence (with vector) Restriction Map

Product ID

FHC11142

ORF Sequence

DNA sequence (930 bp)
Protein sequence (310 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB0985

Symbol

NKX1-2

Alias : C10orf121, NKX-1.1, bB238F13.2

Description

NK1 homeobox 2

Original Clone ID

cs02085

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 930 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 310 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS59221.1 4.3e-65 100.0 2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 185 196 PR00024 Homeobox IPR020479 200 210 PR00024 Homeobox IPR020479 210 219 PR00024 Homeobox HMMPfam IPR001356 164 220 PF00046 Homeobox HMMSmart IPR001356 163 225 SM00389 Homeobox ProfileScan IPR001356 161 221 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000200 283 125853,260370,600733,606176,606392 30.6 86.8 NP_002132 320 142953 30.1 81.3 NP_002439 303 106600,142983,189500,608874 33.7 85.5 XP_011523010 488 142966 30.0 84.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB0985 Download

>KIBB0985  930 bp
ATGCTGGCATGGCAGGACGGCGGGGCCAAGGCGGCTCCCTCCCACCACAAGATTTCTTTC
TCTGTCCTGGACATCCTGGACCCACAGAAATTCACCCGCGCAGCGCTCCCTGCCGTGCGC
CCGGCTCCCCGGGAAGCCAGGAAAAGTTTGGCGGAGGTCGAAGCGGGGAAAGATGCCAGC
TCCAGGGACCCTGTCCGACAGCTGGAGACCCCTGATGCTGCGGGCCCAGGCGCCGGCCAG
GCGTCCCCCCTGGAGGGTTCCGAGGCGGAAGAGGAGGAGGATGCGGAGGATCCGAGGAGG
CCGCGGCTGCGGGAGCGGGCTGCGCGCTTGCTGCCGGGCCTAGCGCGCTCACCTGACGCC
CCGGCCGGGGCATTGGCGTCTGGGGAGCCCTGCGAGGACGGCGGGGGCGGCCCTGTGAGG
TCCCCCCCGGGATCCCCCGGCTCCCCGCGTCCCAGGCGCCGGCGCCTGGAGCCCAACTGC
GCCAAGCCGCGGCGCGCGCGCACCGCCTTCACCTACGAGCAGCTGGTGGCCTTGGAGAAC
AAGTTCCGGGCCACGCGCTACCTGTCAGTGTGCGAGCGCCTGAACCTCGCGCTGTCTCTC
AGCCTCACCGAGACGCAGGTCAAAATCTGGTTCCAGAATCGCAGGACCAAGTGGAAGAAG
CAGAACCCGGGTGCCGACGGCGCGGCGCAGGTGGGGGGTGGCGCGCCCCAGCCAGGGGCG
GCGGGGGGCGGCGGCGGCGGCGGCTCGGGGGGCAGTCCTGGCCCTCCCGGCACCGGCGCT
CTGCACTTCCAGACTTTCCCCTCCTACTCCGCGGCCAATGTCCTCTTCCCGTCCGCCGCC
TCCTTCCCGCTGACGGCTGCCGCCCCCGGGAGCCCTTTCGCGCCGTTCCTTGGGCCTTCC
TACCTGACCCCCTTCTACGCCCCGCGTCTA

ORF Protein

Cloned ORF protein sequence for pFN21AB0985 Download

>KIBB0985  310 aa
MLAWQDGGAKAAPSHHKISFSVLDILDPQKFTRAALPAVRPAPREARKSLAEVEAGKDAS
SRDPVRQLETPDAAGPGAGQASPLEGSEAEEEEDAEDPRRPRLRERAARLLPGLARSPDA
PAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALEN
KFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQVGGGAPQPGA
AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSPFAPFLGPS
YLTPFYAPRL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB0985 Download

>pFN21AB0985  5635 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGGCATGGCAGGACGGCGGGGCCAAGGCGGC
TCCCTCCCACCACAAGATTTCTTTCTCTGTCCTGGACATCCTGGACCCACAGAAATTCAC
CCGCGCAGCGCTCCCTGCCGTGCGCCCGGCTCCCCGGGAAGCCAGGAAAAGTTTGGCGGA
GGTCGAAGCGGGGAAAGATGCCAGCTCCAGGGACCCTGTCCGACAGCTGGAGACCCCTGA
TGCTGCGGGCCCAGGCGCCGGCCAGGCGTCCCCCCTGGAGGGTTCCGAGGCGGAAGAGGA
GGAGGATGCGGAGGATCCGAGGAGGCCGCGGCTGCGGGAGCGGGCTGCGCGCTTGCTGCC
GGGCCTAGCGCGCTCACCTGACGCCCCGGCCGGGGCATTGGCGTCTGGGGAGCCCTGCGA
GGACGGCGGGGGCGGCCCTGTGAGGTCCCCCCCGGGATCCCCCGGCTCCCCGCGTCCCAG
GCGCCGGCGCCTGGAGCCCAACTGCGCCAAGCCGCGGCGCGCGCGCACCGCCTTCACCTA
CGAGCAGCTGGTGGCCTTGGAGAACAAGTTCCGGGCCACGCGCTACCTGTCAGTGTGCGA
GCGCCTGAACCTCGCGCTGTCTCTCAGCCTCACCGAGACGCAGGTCAAAATCTGGTTCCA
GAATCGCAGGACCAAGTGGAAGAAGCAGAACCCGGGTGCCGACGGCGCGGCGCAGGTGGG
GGGTGGCGCGCCCCAGCCAGGGGCGGCGGGGGGCGGCGGCGGCGGCGGCTCGGGGGGCAG
TCCTGGCCCTCCCGGCACCGGCGCTCTGCACTTCCAGACTTTCCCCTCCTACTCCGCGGC
CAATGTCCTCTTCCCGTCCGCCGCCTCCTTCCCGCTGACGGCTGCCGCCCCCGGGAGCCC
TTTCGCGCCGTTCCTTGGGCCTTCCTACCTGACCCCCTTCTACGCCCCGCGTCTAGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT