FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB0985, 310 aa 1>>>pF1KB0985 310 - 310 aa - 310 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.5289+/-0.000824; mu= 5.9459+/- 0.050 mean_var=283.7375+/-59.099, 0's: 0 Z-trim(117.7): 159 B-trim: 1057 in 1/51 Lambda= 0.076141 statistics sampled from 18328 (18498) to 18328 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.828), E-opt: 0.2 (0.568), width: 16 Scan time: 3.330 The best scores are: opt bits E(32554) CCDS59221.1 2 gene_id:390010|Hs108|chr10 ( 310) 2123 245.4 4.3e-65 >>CCDS59221.1 2 gene_id:390010|Hs108|chr10 (310 aa) initn: 2123 init1: 2123 opt: 2123 Z-score: 1282.2 bits: 245.4 E(32554): 4.3e-65 Smith-Waterman score: 2123; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310) 10 20 30 40 50 60 pF1KB0 MLAWQDGGAKAAPSHHKISFSVLDILDPQKFTRAALPAVRPAPREARKSLAEVEAGKDAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MLAWQDGGAKAAPSHHKISFSVLDILDPQKFTRAALPAVRPAPREARKSLAEVEAGKDAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB0 SRDPVRQLETPDAAGPGAGQASPLEGSEAEEEEDAEDPRRPRLRERAARLLPGLARSPDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 SRDPVRQLETPDAAGPGAGQASPLEGSEAEEEEDAEDPRRPRLRERAARLLPGLARSPDA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB0 PAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 PAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB0 KFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQVGGGAPQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 KFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQVGGGAPQPGA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB0 AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSPFAPFLGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSPFAPFLGPS 250 260 270 280 290 300 310 pF1KB0 YLTPFYAPRL :::::::::: CCDS59 YLTPFYAPRL 310 310 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:36:39 2016 done: Sun Nov 6 04:36:40 2016 Total Scan time: 3.330 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]