TRIM2 ORF clone pF1KSDA0517

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Flexi ORF Clone pF1KSDA0517

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Clone info.

Species

human

Clone Name

pF1KSDA0517 Sequence (with vector) Restriction Map

Product ID

FXC00550

HaloTag Clone PID

FHC00550

ORF Sequence

DNA sequence (2313 bp)
Protein sequence (771 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383896]

Gene

KIAA0517

Symbol

TRIM2

Alias : CMT2R, RNF86

Description

tripartite motif containing 2, transcript variant 1

Original Clone ID

hg00752

Features of the cloned ORF sequence

Description

Length: 2313 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 771 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3781.2 3e-202 100.0 TRIM2 CCDS47147.1 4.3e-194 100.0 TRIM2 CCDS7764.1 4.9e-135 67.3 TRIM3 CCDS58115.1 8.6e-112 67.2 TRIM3 CCDS893.1 6.7e-15 25.9 TRIM45 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 50 90 PF00097 Zinc finger IPR000315 143 181 PF00643 Zinc finger IPR017868 350 445 PF00630 Filamin/ABP280 repeat-like IPR001258 513 540 PF01436 NHL repeat IPR001258 560 587 PF01436 NHL repeat IPR001258 604 629 PF01436 NHL repeat IPR001258 649 676 PF01436 NHL repeat IPR001258 696 723 PF01436 NHL repeat IPR001258 740 767 PF01436 NHL repeat HMMSmart IPR001841 50 90 SM00184 Zinc finger IPR000315 140 181 SM00336 Zinc finger IPR003649 188 314 SM00502 B-box IPR001298 351 451 SM00557 Filamin/ABP280 repeat ProfileScan IPR001841 50 91 PS50089 Zinc finger IPR000315 140 181 PS50119 Zinc finger IPR017868 347 448 PS50194 Filamin/ABP280 repeat-like IPR013017 500 543 PS51125 NHL repeat IPR013017 547 590 PS51125 NHL repeat IPR013017 591 632 PS51125 NHL repeat IPR013017 636 679 PS51125 NHL repeat IPR013017 683 726 PS51125 NHL repeat IPR013017 727 770 PS51125 NHL repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056086 771 614141,615490 100.0 100.0 XP_006714220 775 614141,615490 99.5 100.0 XP_016863432 770 614141,615490 99.9 100.0 XP_006714221 774 614141,615490 99.4 100.0 XP_016863435 762 614141,615490 100.0 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0517 Download

>KIAA0517  2313 bp
ATGCACAGGAGTGGCCGTTATGGAACGCAGCAGCAGCGTGCAGGGTCAAAGACAGCCGGC
CCCCCATGTCAGTGGTCTAGGATGGCCAGTGAAGGCACCAACATCCCAAGTCCTGTGGTG
CGCCAGATTGACAAGCAGTTTCTGATTTGCAGTATATGCCTGGAACGGTACAAGAATCCC
AAGGTTCTCCCCTGTCTGCACACTTTCTGCGAGAGGTGCCTGCAGAACTACATTCCTGCC
CACAGTTTAACCCTCTCCTGCCCAGTGTGCCGCCAGACCTCCATCCTGCCCGAGAAAGGG
GTGGCCGCGCTCCAGAACAATTTCTTCATCACAAACCTGATGGACGTGCTGCAGCGAACT
CCAGGCAGCAACGCTGAGGAGTCTTCCATCCTGGAGACAGTCACTGCTGTGGCTGCGGGA
AAGCCTCTCTCTTGCCCAAACCACGATGGGAATGTGATGGAATTTTACTGCCAGTCCTGT
GAGACTGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCAGAGCACCCCACAGTTCCA
CTCAAGGATGTGGTGGAACAGCACAAGGCCTCGCTCCAGGTCCAGCTGGATGCTGTCAAC
AAAAGGCTCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCTGAAATCATTCATCAGTTA
ACCAACCAAAAGGCCAGCATCGTGGATGACATTCATTCCACCTTTGATGAGCTCCAGAAG
ACTTTAAATGTGCGCAAGAGTGTGCTGCTTATGGAATTGGAGGTCAACTATGGCCTCAAA
CACAAAGTCCTCCAGTCGCAGCTGGATACTCTGCTCCAGGGGCAGGAGAGCATTAAGAGC
TGCAGCAACTTCACAGCGCAGGCCCTCAACCATGGCACGGAGACCGAGGTCCTACTGGTG
AAGAAGCAGATGAGCGAGAAGCTGAACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCG
CGGGAGAACGACCAGCTGGATTTCATCGTGGAAACCGAGGGGCTGAAGAAGTCCATCCAC
AACCTCGGGACGATCTTAACCACCAACGCCGTTGCCTCAGAGACAGTGGCCACGGGCGAG
GGGCTGCGGCAGACCATCATCGGGCAGCCCATGTCCGTCACCATCACCACCAAGGACAAA
GACGGTGAGCTGTGCAAAACCGGCAACGCCTACCTCACCGCCGAACTGAGCACCCCCGAC
GGGAGCGTGGCAGACGGGGAGATCCTGGACAACAAGAACGGCACCTATGAGTTTTTGTAC
ACTGTCCAGAAGGAAGGGGACTTTACCCTGTCTCTGAGACTCTATGACCAGCACATCCGA
GGCAGCCCGTTTAAGCTGAAAGTGATCCGATCCGCTGATGTGTCTCCCACCACAGAAGGC
GTGAAGAGGCGCGTTAAGTCCCCGGGGAGCGGCCACGTCAAGCAGAAAGCTGTGAAAAGA
CCCGCAAGCATGTACAGCACTGGAAAACGAAAAGAGAATCCCATCGAAGACGATTTGATC
TTTCGAGTGGGTACCAAAGGAAGAAATAAAGGAGAGTTTACAAATCTTCAGGGGGTAGCT
GCATCTACAAATGGAAAGATATTAATTGCAGACAGTAACAACCAATGTGTGCAGATATTT
TCCAATGATGGCCAGTTCAAAAGTCGTTTTGGCATACGGGGACGCTCTCCGGGGCAGCTG
CAGCGGCCCACAGGAGTGGCTGTACATCCCAGTGGGGACATAATCATTGCCGATTATGAT
AATAAATGGGTCAGCATTTTCTCCTCCGATGGGAAATTTAAGACAAAAATTGGATCAGGA
AAGCTGATGGGACCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATTATTGTTGTGGAC
AACAAGGCGTGCTGCGTGTTTATCTTCCAGCCAAACGGGAAAATAGTCACCAGGTTTGGT
AGCCGAGGAAATGGGGACAGGCAGTTTGCAGGTCCCCATTTTGCAGCTGTAAATAGCAAT
AATGAGATTATTATTACAGATTTCCATAATCATTCTGTCAAGGTGTTTAATCAGGAAGGA
GAATTCATGTTGAAGTTTGGCTCAAATGGAGAAGGAAATGGGCAGTTTAATGCTCCAACA
GGTGTAGCAGTGGATTCAAATGGAAACATCATTGTGGCCGACTGGGGAAACAGCAGGATC
CAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTACATTAACACATCTGCTGACCCACTC
TATGGCCCCCAAGGCCTGGCCCTAACTTCAGATGGTCATGTTGTGGTTGCAGACTCTGGA
AATCACTGTTTCAAAGTCTATCGATACTTACAG

ORF Protein

Cloned ORF protein sequence for pF1KSDA0517 Download

>KIAA0517  771 aa
MHRSGRYGTQQQRAGSKTAGPPCQWSRMASEGTNIPSPVVRQIDKQFLICSICLERYKNP
KVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRT
PGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRECTEGEHAEHPTVP
LKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQK
TLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLV
KKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGE
GLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLY
TVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKR
PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF
SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSG
KLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSN
NEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRI
QVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0517 Download

>pF1KSDA0517  5452 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGCACAGGAGTGGCCGTTATGGAACGCAGCAGCAGCGTGCAGGGTCAAAGACA
GCCGGCCCCCCATGTCAGTGGTCTAGGATGGCCAGTGAAGGCACCAACATCCCAAGTCCT
GTGGTGCGCCAGATTGACAAGCAGTTTCTGATTTGCAGTATATGCCTGGAACGGTACAAG
AATCCCAAGGTTCTCCCCTGTCTGCACACTTTCTGCGAGAGGTGCCTGCAGAACTACATT
CCTGCCCACAGTTTAACCCTCTCCTGCCCAGTGTGCCGCCAGACCTCCATCCTGCCCGAG
AAAGGGGTGGCCGCGCTCCAGAACAATTTCTTCATCACAAACCTGATGGACGTGCTGCAG
CGAACTCCAGGCAGCAACGCTGAGGAGTCTTCCATCCTGGAGACAGTCACTGCTGTGGCT
GCGGGAAAGCCTCTCTCTTGCCCAAACCACGATGGGAATGTGATGGAATTTTACTGCCAG
TCCTGTGAGACTGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCAGAGCACCCCACA
GTTCCACTCAAGGATGTGGTGGAACAGCACAAGGCCTCGCTCCAGGTCCAGCTGGATGCT
GTCAACAAAAGGCTCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCTGAAATCATTCAT
CAGTTAACCAACCAAAAGGCCAGCATCGTGGATGACATTCATTCCACCTTTGATGAGCTC
CAGAAGACTTTAAATGTGCGCAAGAGTGTGCTGCTTATGGAATTGGAGGTCAACTATGGC
CTCAAACACAAAGTCCTCCAGTCGCAGCTGGATACTCTGCTCCAGGGGCAGGAGAGCATT
AAGAGCTGCAGCAACTTCACAGCGCAGGCCCTCAACCATGGCACGGAGACCGAGGTCCTA
CTGGTGAAGAAGCAGATGAGCGAGAAGCTGAACGAGCTGGCCGACCAGGACTTCCCCTTG
CACCCGCGGGAGAACGACCAGCTGGATTTCATCGTGGAAACCGAGGGGCTGAAGAAGTCC
ATCCACAACCTCGGGACGATCTTAACCACCAACGCCGTTGCCTCAGAGACAGTGGCCACG
GGCGAGGGGCTGCGGCAGACCATCATCGGGCAGCCCATGTCCGTCACCATCACCACCAAG
GACAAAGACGGTGAGCTGTGCAAAACCGGCAACGCCTACCTCACCGCCGAACTGAGCACC
CCCGACGGGAGCGTGGCAGACGGGGAGATCCTGGACAACAAGAACGGCACCTATGAGTTT
TTGTACACTGTCCAGAAGGAAGGGGACTTTACCCTGTCTCTGAGACTCTATGACCAGCAC
ATCCGAGGCAGCCCGTTTAAGCTGAAAGTGATCCGATCCGCTGATGTGTCTCCCACCACA
GAAGGCGTGAAGAGGCGCGTTAAGTCCCCGGGGAGCGGCCACGTCAAGCAGAAAGCTGTG
AAAAGACCCGCAAGCATGTACAGCACTGGAAAACGAAAAGAGAATCCCATCGAAGACGAT
TTGATCTTTCGAGTGGGTACCAAAGGAAGAAATAAAGGAGAGTTTACAAATCTTCAGGGG
GTAGCTGCATCTACAAATGGAAAGATATTAATTGCAGACAGTAACAACCAATGTGTGCAG
ATATTTTCCAATGATGGCCAGTTCAAAAGTCGTTTTGGCATACGGGGACGCTCTCCGGGG
CAGCTGCAGCGGCCCACAGGAGTGGCTGTACATCCCAGTGGGGACATAATCATTGCCGAT
TATGATAATAAATGGGTCAGCATTTTCTCCTCCGATGGGAAATTTAAGACAAAAATTGGA
TCAGGAAAGCTGATGGGACCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATTATTGTT
GTGGACAACAAGGCGTGCTGCGTGTTTATCTTCCAGCCAAACGGGAAAATAGTCACCAGG
TTTGGTAGCCGAGGAAATGGGGACAGGCAGTTTGCAGGTCCCCATTTTGCAGCTGTAAAT
AGCAATAATGAGATTATTATTACAGATTTCCATAATCATTCTGTCAAGGTGTTTAATCAG
GAAGGAGAATTCATGTTGAAGTTTGGCTCAAATGGAGAAGGAAATGGGCAGTTTAATGCT
CCAACAGGTGTAGCAGTGGATTCAAATGGAAACATCATTGTGGCCGACTGGGGAAACAGC
AGGATCCAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTACATTAACACATCTGCTGAC
CCACTCTATGGCCCCCAAGGCCTGGCCCTAACTTCAGATGGTCATGTTGTGGTTGCAGAC
TCTGGAAATCACTGTTTCAAAGTCTATCGATACTTACAGTACGTAGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAA
CCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCA
GGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTG
CTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGT
CAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCC
CTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCT
TCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTC
GTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTA
TCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCA
GCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAG
TGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAG
CCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGT
AGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAA
GATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGG
ATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAAT
ACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCT
TCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACG
GTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACC
TGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATG
GTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCAC
GATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGC
AGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGAC
CCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCAT
GCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGC
CTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGG
AGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATA
AACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCT
ACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT