JADE2 ORF clone pF1KSDA0239

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Flexi ORF Clone pF1KSDA0239

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Clone info.

Species

human

Clone Name

pF1KSDA0239 Sequence (with vector) Restriction Map

Product ID

FXC00474

HaloTag Clone PID

FHC00474

ORF Sequence

DNA sequence (2370 bp)
Protein sequence (790 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383816]

Gene

KIAA0239

Symbol

JADE2

Alias : JADE-2, PHF15

Description

jade family PHD finger 2, transcript variant 3

Original Clone ID

ha06313

Features of the cloned ORF sequence

Description

Length: 2370 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 790 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4176.1 7.4e-148 99.9 JADE2 CCDS75305.1 1.6e-147 99.7 JADE2 CCDS78061.1 7.6e-95 94.5 JADE2 CCDS14271.1 2.4e-45 43.6 JADE3 CCDS75191.1 1.8e-42 49.5 JADE1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019542 42 176 PF10513 Enhancer of polycomb-like IPR019787 201 247 PF00628 Zinc finger HMMSmart IPR001965 201 247 SM00249 Zinc finger IPR001965 310 365 SM00249 Zinc finger ProfileScan IPR019787 199 249 PS50016 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056103 790 610515 99.9 100.0 NP_001276913 791 610515 99.7 100.0 XP_016864771 833 610515 94.6 98.6 XP_005272005 834 610515 94.5 98.5 NP_001295072 834 610515 94.5 98.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0239 Download

>KIAA0239  2370 bp
ATGGAAGAGAAGAGGCGAAAATACTCCATCAGCAGTGACAACTCTGACACCACTGACAGT
CATGCGACATCTACATCCGCATCAAGATGCTCCAAACTGCCCAGCAGCACCAAGTCGGGC
TGGCCCCGACAGAACGAAAAGAAGCCCTCCGAGGTTTTCCGGACAGACTTGATCACAGCC
ATGAAGATCCCGGACTCATACCAGCTCAGCCCGGATGACTACTACATCCTGGCAGACCCA
TGGCGACAGGAATGGGAGAAAGGTGTGCAGGTGCCTGCCGGGGCAGAGGCCATCCCAGAG
CCCGTGGTGAGGATCCTCCCACCACTGGAAGGCCCCCCTGCCCAGGCATCCCCGAGCAGC
ACCATGCTTGGTGAGGGCTCCCAGCCTGATTGGCCAGGGGGCAGCCGCTATGACTTGGAC
GAGATTGATGCCTACTGGCTGGAGCTCATCAACTCGGAGCTTAAGGAGATGGAGAGGCCG
GAGCTGGACGAGCTGACATTAGAGCGTGTGCTGGAGGAGCTGGAGACCCTGTGCCACCAG
AATATGGCCAGGGCCATTGAGACGCAGGAGGGGCTGGGCATCGAGTACGACGAGGATGTT
GTCTGCGACGTGTGTCGCTCTCCTGAGGGCGAGGATGGCAACGAGATGGTCTTCTGTGAC
AAGTGCAACGTCTGTGTGCATCAGGCATGCTACGGGATCCTCAAGGTGCCCACGGGCAGC
TGGCTGTGCCGGACGTGTGCCCTGGGTGTCCAGCCAAAGTGCCTGCTCTGCCCCAAGCGA
GGAGGAGCCTTGAAGCCCACTAGAAGTGGGACCAAGTGGGTGCATGTCAGCTGTGCCCTA
TGGATTCCTGAGGTCAGCATCGGCTGCCCAGAGAAGATGGAGCCCATCACCAAGATCTCG
CATATCCCAGCCAGCCGCTGGGCTCTGTCCTGCAGCCTCTGCAAGGAATGCACAGGCACC
TGCATCCAGTGTTCCATGCCTTCCTGCGTCATAGCGTTCCATGTCACATGCGCCTTTGAC
CACGGCCTGGAAATGCGGACTATATTAGCAGACAACGATGAGGTCAAGTTCAAGTCATTC
TGCCAGGAGCACAGTGACGGGGGCCCACGTAATGAGCCCACATCTGAGCCCACGGAACCC
AGCCAGGCTGGCGAGGACCTGGAAAAGGTGACCCTGCGCAAGCAGCGGCTGCAGCAGCTA
GAGGAGGACTTCTACGAGCTGGTGGAGCCGGCTGAGGTGGCTGAGCGGCTGGACCTGGCT
GAGGCACTGGTCGACTTCATCTACCAGTACTGGAAGCTGAAGAGGAAAGCCAATGCCAAC
CAGCCGCTGCTGACCCCCAAGACCGACGAGGTGGACAACCTGGCCCAGCAGGAGCAGGAC
GTCCTCTACCGCCGCCTGAAGCTCTTCACCCATCTGCGGCAGGACCTAGAGAGGGTTAGA
AATCTGTGCTACATGGTGACAAGGCGCGAGAGAACGAAACACGCCATCTGCAAACTCCAG
GAGCAGATATTCCACCTGCAGATGAAACTTATTGAACAGGATCTGTGTCGAGGCCTGTCC
ACCTCATTCCCCATCGATGGCACCTTCTTCAACAGCTGGCTGGCACAGTCGGTGCAGATC
ACAGCAGAGAACATGGCCATGAGCGAGTGGCCACTGAACAATGGGCACCGCGAGGACCCT
GCTCCAGGGCTGCTGTCAGAGGAACTGCTGCAGGACGAGGAGACACTGCTCAGCTTCATG
CGGGACCCCTCGCTGCGACCTGGTGACCCTGCTAGGAAGGCCCGAGGCCGCACCCGCCTG
CCTGCCAAGAAGAAACCACCACCACCACCACCGCAGGACGGGCCTGGTTCACGGACGACT
CCAGACAAAGCCCCCAAGAAGACCTGGGGCCAGGATGCAGGCAGTGGCAAGGGGGGTCAA
GGGCCACCTACCAGGAAGCCACCACGTCGGACATCTTCTCACTTGCCGTCCAGCCCTGCA
GCCGGGGACTGTCCCATCCTAGCCACCCCTGAAAGCCCCCCGCCACTGGCCCCTGAGACC
CCGGACGAGGCAGCCTCAGTAGCTGCTGACTCAGATGTCCAAGTGCCTGGCCCTGCAGCA
AGCCCTAAGCCTTTGGGCCGGCTCCGGCCACCCCGCGAGAGCAAGGTAACCCGGAGATTG
CCGGGTGCCAGGCCTGATGCTGGGATGGGACCACCTTCAGCTGTGGCTGAGAGGCCCAAG
GTCAGCCTGCATTTTGACACTGAGACTGATGGCTACTTCTCTGATGGGGAGATGAGCGAC
TCAGATGTAGAGGCCGAGGACGGTGGGGTGCAGCGGGGTCCCCGGGAGGCAGGGGCAGAG
GAGGTGGTCCGCATGGGCGTACTGGCCTCC

ORF Protein

Cloned ORF protein sequence for pF1KSDA0239 Download

>KIAA0239  790 aa
MEEKRRKYSISSDNSDTTDSHATSTSASRCSKLPSSTKSGWPRQNEKKPSEVFRTDLITA
MKIPDSYQLSPDDYYILADPWRQEWEKGVQVPAGAEAIPEPVVRILPPLEGPPAQASPSS
TMLGEGSQPDWPGGSRYDLDEIDAYWLELINSELKEMERPELDELTLERVLEELETLCHQ
NMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPTGS
WLCRTCALGVQPKCLLCPKRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKIS
HIPASRWALSCSLCKECTGTCIQCSMPSCVIAFHVTCAFDHGLEMRTILADNDEVKFKSF
CQEHSDGGPRNEPTSEPTEPSQAGEDLEKVTLRKQRLQQLEEDFYELVEPAEVAERLDLA
EALVDFIYQYWKLKRKANANQPLLTPKTDEVDNLAQQEQDVLYRRLKLFTHLRQDLERVR
NLCYMVTRRERTKHAICKLQEQIFHLQMKLIEQDLCRGLSTSFPIDGTFFNSWLAQSVQI
TAENMAMSEWPLNNGHREDPAPGLLSEELLQDEETLLSFMRDPSLRPGDPARKARGRTRL
PAKKKPPPPPPQDGPGSRTTPDKAPKKTWGQDAGSGKGGQGPPTRKPPRRTSSHLPSSPA
AGDCPILATPESPPPLAPETPDEAASVAADSDVQVPGPAASPKPLGRLRPPRESKVTRRL
PGARPDAGMGPPSAVAERPKVSLHFDTETDGYFSDGEMSDSDVEAEDGGVQRGPREAGAE
EVVRMGVLAS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0239 Download

>pF1KSDA0239  5507 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGAAGAGAAGAGGCGAAAATACTCCATCAGCAGTGACAACTCTGACACCACT
GACAGTCATGCGACATCTACATCCGCATCAAGATGCTCCAAACTGCCCAGCAGCACCAAG
TCGGGCTGGCCCCGACAGAACGAAAAGAAGCCCTCCGAGGTTTTCCGGACAGACTTGATC
ACAGCCATGAAGATCCCGGACTCATACCAGCTCAGCCCGGATGACTACTACATCCTGGCA
GACCCATGGCGACAGGAATGGGAGAAAGGTGTGCAGGTGCCTGCCGGGGCAGAGGCCATC
CCAGAGCCCGTGGTGAGGATCCTCCCACCACTGGAAGGCCCCCCTGCCCAGGCATCCCCG
AGCAGCACCATGCTTGGTGAGGGCTCCCAGCCTGATTGGCCAGGGGGCAGCCGCTATGAC
TTGGACGAGATTGATGCCTACTGGCTGGAGCTCATCAACTCGGAGCTTAAGGAGATGGAG
AGGCCGGAGCTGGACGAGCTGACATTAGAGCGTGTGCTGGAGGAGCTGGAGACCCTGTGC
CACCAGAATATGGCCAGGGCCATTGAGACGCAGGAGGGGCTGGGCATCGAGTACGACGAG
GATGTTGTCTGCGACGTGTGTCGCTCTCCTGAGGGCGAGGATGGCAACGAGATGGTCTTC
TGTGACAAGTGCAACGTCTGTGTGCATCAGGCATGCTACGGGATCCTCAAGGTGCCCACG
GGCAGCTGGCTGTGCCGGACGTGTGCCCTGGGTGTCCAGCCAAAGTGCCTGCTCTGCCCC
AAGCGAGGAGGAGCCTTGAAGCCCACTAGAAGTGGGACCAAGTGGGTGCATGTCAGCTGT
GCCCTATGGATTCCTGAGGTCAGCATCGGCTGCCCAGAGAAGATGGAGCCCATCACCAAG
ATCTCGCATATCCCAGCCAGCCGCTGGGCTCTGTCCTGCAGCCTCTGCAAGGAATGCACA
GGCACCTGCATCCAGTGTTCCATGCCTTCCTGCGTCATAGCGTTCCATGTCACATGCGCC
TTTGACCACGGCCTGGAAATGCGGACTATATTAGCAGACAACGATGAGGTCAAGTTCAAG
TCATTCTGCCAGGAGCACAGTGACGGGGGCCCACGTAATGAGCCCACATCTGAGCCCACG
GAACCCAGCCAGGCTGGCGAGGACCTGGAAAAGGTGACCCTGCGCAAGCAGCGGCTGCAG
CAGCTAGAGGAGGACTTCTACGAGCTGGTGGAGCCGGCTGAGGTGGCTGAGCGGCTGGAC
CTGGCTGAGGCACTGGTCGACTTCATCTACCAGTACTGGAAGCTGAAGAGGAAAGCCAAT
GCCAACCAGCCGCTGCTGACCCCCAAGACCGACGAGGTGGACAACCTGGCCCAGCAGGAG
CAGGACGTCCTCTACCGCCGCCTGAAGCTCTTCACCCATCTGCGGCAGGACCTAGAGAGG
GTTAGAAATCTGTGCTACATGGTGACAAGGCGCGAGAGAACGAAACACGCCATCTGCAAA
CTCCAGGAGCAGATATTCCACCTGCAGATGAAACTTATTGAACAGGATCTGTGTCGAGGC
CTGTCCACCTCATTCCCCATCGATGGCACCTTCTTCAACAGCTGGCTGGCACAGTCGGTG
CAGATCACAGCAGAGAACATGGCCATGAGCGAGTGGCCACTGAACAATGGGCACCGCGAG
GACCCTGCTCCAGGGCTGCTGTCAGAGGAACTGCTGCAGGACGAGGAGACACTGCTCAGC
TTCATGCGGGACCCCTCGCTGCGACCTGGTGACCCTGCTAGGAAGGCCCGAGGCCGCACC
CGCCTGCCTGCCAAGAAGAAACCACCACCACCACCACCGCAGGACGGGCCTGGTTCACGG
ACGACTCCAGACAAAGCCCCCAAGAAGACCTGGGGCCAGGATGCAGGCAGTGGCAAGGGG
GGTCAAGGGCCACCTACCAGGAAGCCACCACGTCGGACATCTTCTCACTTGCCGTCCAGC
CCTGCAGCCGGGGACTGTCCCATCCTAGCCACCCCTGAAAGCCCCCCGCCACTGGCCCCT
GAGACCCCGGACGAGGCAGCCTCAGTAGCTGCTGACTCAGATGTCCAAGTGCCTGGCCCT
GCAGCAAGCCCTAAGCCTTTGGGCCGGCTCCGGCCACCCCGCGAGAGCAAGGTAACCCGG
AGATTGCCGGGTGCCAGGCCTGATGCTGGGATGGGACCACCTTCAGCTGTGGCTGAGAGG
CCCAAGGTCAGCCTGCATTTTGACACTGAGACTGATGGCTACTTCTCTGATGGGGAGATG
AGCGACTCAGATGTAGAGGCCGAGGACGGTGGGGTGCAGCGGGGTCCCCGGGAGGCAGGG
GCAGAGGAGGTGGTCCGCATGGGCGTACTGGCCTCCTACGTAGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT