LARP1B ORF clone pF1KE0048

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KE0048

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Clone info.

Species

human

Clone Name

pF1KE0048 Sequence (with vector) Restriction Map

Product ID

FXC05807

HaloTag Clone PID

FHC05807

ORF Sequence

DNA sequence (1566 bp)
Protein sequence (522 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527177]

Gene

KIEE0048

Symbol

LARP1B

Alias : LARP2

Description

La ribonucleoprotein domain family, member 1B, transcript variant 2

Original Clone ID

oc00748

Features of the cloned ORF sequence

Description

Length: 1566 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 522 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3738.1 6e-139 100.0 LARP1B CCDS64057.1 4.3e-89 100.0 LARP1B CCDS47133.1 4.5e-89 100.0 LARP1B CCDS4328.1 1.2e-59 52.6 LARP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006630 219 276 PF05383 RNA-binding protein Lupus La HMMSmart IPR006630 213 291 SM00715 RNA-binding protein Lupus La ProfileScan IPR006630 209 299 PS50961 RNA-binding protein Lupus La
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006714839 891 612059 54.0 90.4 XP_011535920 891 612059 54.0 90.4 XP_005268465 891 612059 54.0 90.4 XP_005268464 891 612059 54.0 90.4 XP_006714838 955 612059 52.6 96.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0048 Download

>KIEE0048  1566 bp
ATGGAGAATTGGCCAACACCAAGTGAATTAGTGAACACTGGATTTCAGAGCGTCCTCAGC
CAAGGAAATAAAAAGCCACAAAATAGAAAAGAAAAAGAAGAGAAGGTTGAAAAGAGAAGT
AACAGTGACAGCAAAGAAAACCGGGAAACAAAATTAAATGGTCCTGGTGAAAACGTCAGT
GAGGATGAGGCTCAGTCAAGTAATCAACGTAAGAGAGCTAATAAGCACAAGTGGGTACCA
CTCCACTTAGATGTTGTAAGATCAGAGAGTCAAGAAAGACCTGGATCCCGGAACAGCTCA
AGATGTCAACCTGAAGCAAATAAACCAACACATAACAATAGGAGAAATGATACACGAAGT
TGGAAGCGAGATAGAGAAAAAAGGGATGATCAAGATGACGTTTCCAGTGTGAGAAGTGAG
GGTGGTAATATCCGAGGTTCCTTTAGAGGTCGAGGAAGAGGCCGAGGACGGGGAAGAGGA
CGAGGCAGAGGAAATCCTCGATTGAACTTTGATTATTCATATGGTTATCAAGAACATGGT
GAAAGGACTGATCAACCATTTCAAACAGAACTTAATACCAGTATGATGTATTACTATGAT
GATGGTACAGGTGTACAGGTGTATCCTGTGGAAGAAGCATTGCTTAAAGAGTATATTAAG
CGTCAAATTGAATATTACTTCAGTGTAGAAAATTTGGAACGAGACTTCTTTCTTCGGGGA
AAGATGGATGAACAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTTCAGCGTGTTCAG
GCTCTCACTACAAACCTTAATCTCATCTTAGAGGCACTGAAGGATAGCACAGAAGTAGAA
ATTGTGGATGAGAAAATGAGAAAAAAGATAGAACCAGAAAAATGGCCAATTCCAGGCCCT
CCTCCACGCAGTGTGCCACCAACAGACTTCTCTCAACTGATTGATTGTCCAGAGTTTGTA
CCAGGCCAAGCCTTTTGCTCACATACAGAGTCTGCCCCAAATTCTCCAAGAATTGGAAGC
CCATTGAGCCCAAAGAAAAACAGTGAAACAAGTATTCTTCAAGCAATGTCTAGAGGTTTG
TCTACCAGTTTGCCTGACTTGGACTCAGAACCTTGGATAGAAGTTAAAAAAAGACATCAG
CCAGCCCCAGTGAAATTGAGGGAATCAGTGTCTGTCCCTGAAGGGTCATTAAATCAGCTA
TGTTCTTCAGAAGAACCAGAACAAGAAGAACTTGATTTTTTGTTTGATGAAGAGATTGAA
CAAATAGGACGAAAAAACACATTTACTGATTGGTCTGATAATGATTCAGATTATGAAATT
GATGACCAAGACTTAAACAAGATTTTGATTGTAACTCAGACACCACCTTATGTGAAAAAA
CATCCTGGAGGAGATCGAACAGGCACCCACATGTCTCGGGCAAAAATCACATCTGAACTT
GCTAAAGTTATCAATGATGGCTTATACTATTATGAACAGGATCTATGGATGGAAGAAGAT
GAAAACAAACACACAGCCATAAAGGTAATTGTTTCTGGCCAACATCTTTCTACTGATGCT
TTGTTT

ORF Protein

Cloned ORF protein sequence for pF1KE0048 Download

>KIEE0048  522 aa
MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS
EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS
WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG
ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG
KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP
PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL
STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE
QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL
AKVINDGLYYYEQDLWMEEDENKHTAIKVIVSGQHLSTDALF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0048 Download

>pF1KE0048  4679 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGAATTGG
CCAACACCAAGTGAATTAGTGAACACTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAA
AAGCCACAAAATAGAAAAGAAAAAGAAGAGAAGGTTGAAAAGAGAAGTAACAGTGACAGC
AAAGAAAACCGGGAAACAAAATTAAATGGTCCTGGTGAAAACGTCAGTGAGGATGAGGCT
CAGTCAAGTAATCAACGTAAGAGAGCTAATAAGCACAAGTGGGTACCACTCCACTTAGAT
GTTGTAAGATCAGAGAGTCAAGAAAGACCTGGATCCCGGAACAGCTCAAGATGTCAACCT
GAAGCAAATAAACCAACACATAACAATAGGAGAAATGATACACGAAGTTGGAAGCGAGAT
AGAGAAAAAAGGGATGATCAAGATGACGTTTCCAGTGTGAGAAGTGAGGGTGGTAATATC
CGAGGTTCCTTTAGAGGTCGAGGAAGAGGCCGAGGACGGGGAAGAGGACGAGGCAGAGGA
AATCCTCGATTGAACTTTGATTATTCATATGGTTATCAAGAACATGGTGAAAGGACTGAT
CAACCATTTCAAACAGAACTTAATACCAGTATGATGTATTACTATGATGATGGTACAGGT
GTACAGGTGTATCCTGTGGAAGAAGCATTGCTTAAAGAGTATATTAAGCGTCAAATTGAA
TATTACTTCAGTGTAGAAAATTTGGAACGAGACTTCTTTCTTCGGGGAAAGATGGATGAA
CAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTTCAGCGTGTTCAGGCTCTCACTACA
AACCTTAATCTCATCTTAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTGTGGATGAG
AAAATGAGAAAAAAGATAGAACCAGAAAAATGGCCAATTCCAGGCCCTCCTCCACGCAGT
GTGCCACCAACAGACTTCTCTCAACTGATTGATTGTCCAGAGTTTGTACCAGGCCAAGCC
TTTTGCTCACATACAGAGTCTGCCCCAAATTCTCCAAGAATTGGAAGCCCATTGAGCCCA
AAGAAAAACAGTGAAACAAGTATTCTTCAAGCAATGTCTAGAGGTTTGTCTACCAGTTTG
CCTGACTTGGACTCAGAACCTTGGATAGAAGTTAAAAAAAGACATCAGCCAGCCCCAGTG
AAATTGAGGGAATCAGTGTCTGTCCCTGAAGGGTCATTAAATCAGCTATGTTCTTCAGAA
GAACCAGAACAAGAAGAACTTGATTTTTTGTTTGATGAAGAGATTGAACAAATAGGACGA
AAAAACACATTTACTGATTGGTCTGATAATGATTCAGATTATGAAATTGATGACCAAGAC
TTAAACAAGATTTTGATTGTAACTCAGACACCACCTTATGTGAAAAAACATCCTGGAGGA
GATCGAACAGGCACCCACATGTCTCGGGCAAAAATCACATCTGAACTTGCTAAAGTTATC
AATGATGGCTTATACTATTATGAACAGGATCTATGGATGGAAGAAGATGAAAACAAACAC
ACAGCCATAAAGGTAATTGTTTCTGGCCAACATCTTTCTACTGATGCTTTGTTTGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT