DDX41 ORF clone FXC11846

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC11846

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KB5059 Sequence (with vector) Restriction Map

Product ID

FXC11846

HaloTag Clone PID

FHC11846

Original Clone PID

ORK11846

ORF Sequence

DNA sequence (1866 bp)
Protein sequence (622 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587378]

Gene

KIBB5059

Symbol

DDX41

Alias : ABS, MPLPF

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 41

Original Clone ID

bm04288

Features of the cloned ORF sequence

Description

Length: 1866 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 622 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4427.1 3.5e-210 100.0 DDX41 CCDS34240.1 1.2e-44 33.0 DDX46 CCDS75306.1 1.2e-44 33.0 DDX46 CCDS46706.1 5.8e-43 39.2 DDX17 CCDS33646.1 7.4e-43 40.1 DDX17 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011545 205 384 PF00270 DNA/RNA helicase IPR001650 451 527 PF00271 Helicase HMMSmart IPR014001 200 411 SM00487 DEAD-like helicase IPR001650 446 527 SM00490 Helicase ProfileScan IPR014014 181 209 PS51195 RNA helicase IPR014001 212 396 PS51192 DEAD-like helicase IPR001650 407 567 PS51194 Helicase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057306 622 608170,616871 100.0 100.0 NP_001160006 575 605281 34.5 83.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5059 Download

>KIBB5059  1866 bp
ATGGAGGAGTCGGAACCCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGA
AGCCGCTCCGAGGCGGAAGATGAGGACGACGAGGACTACGTGCCCTATGTGCCGTTACGG
CAGCGCCGGCAGCTACTGCTCCAGAAGCTGCTGCAGCGAAGACGCAAGGGAGCTGCGGAG
GAAGAGCAGCAGGACAGCGGTAGTGAACCCCGGGGAGATGAGGACGACATCCCGCTAGGC
CCTCAGTCCAACGTCAGCCTCCTGGATCAGCACCAGCACCTTAAAGAGAAGGCTGAAGCG
CGCAAAGAGTCTGCCAAGGAGAAGCAGCTGAAGGAAGAAGAGAAGATCCTGGAGAGTGTT
GCCGAGGGCCGAGCATTGATGTCAGTGAAGGAGATGGCTAAGGGCATTACGTATGATGAC
CCCATCAAAACCAGCTGGACTCCACCCCGTTATGTTCTGAGCATGTCTGAAGAGCGACAT
GAGCGCGTGCGGAAGAAATACCACATCCTGGTGGAGGGAGACGGTATCCCACCACCCATC
AAGAGCTTCAAGGAAATGAAGTTTCCTGCAGCCATCCTGAGAGGCCTGAAGAAGAAAGGC
ATTCACCACCCAACACCCATTCAGATCCAGGGCATCCCCACCATTCTATCTGGCCGTGAC
ATGATAGGCATCGCTTTCACGGGTTCAGGCAAGACACTGGTGTTCACGTTGCCCGTCATC
ATGTTCTGCCTGGAACAAGAGAAGAGGTTACCCTTCTCAAAGCGCGAGGGGCCCTATGGA
CTCATCATCTGCCCCTCGCGGGAGCTGGCCCGGCAGACCCATGGCATCCTGGAGTACTAC
TGCCGCCTGCTGCAGGAGGACAGCTCACCACTCCTGCGCTGCGCCCTCTGCATTGGGGGC
ATGTCCGTGAAAGAGCAGATGGAGACCATCCGACACGGTGTACACATGATGGTGGCCACC
CCGGGGCGCCTCATGGATTTGCTGCAGAAGAAGATGGTCAGCCTAGACATCTGTCGCTAC
CTGGCCCTGGACGAGGCTGACCGCATGATCGACATGGGCTTCGAGGGTGACATCCGTACC
ATCTTCTCCTACTTCAAGGGCCAGCGACAGACCCTGCTCTTCAGTGCCACCATGCCGAAG
AAGATTCAGAACTTTGCTAAGAGTGCCCTTGTAAAGCCTGTGACCATCAATGTGGGGCGT
GCTGGGGCTGCCAGCCTGGATGTCATCCAGGAGGTAGAATATGTGAAGGAGGAGGCCAAG
ATGGTGTACCTGCTCGAGTGCCTGCAGAAGACACCCCCGCCTGTACTCATCTTTGCAGAG
AAGAAGGCAGACGTGGACGCCATCCACGAGTACCTGCTGCTCAAGGGGGTTGAGGCCGTA
GCCATCCATGGGGGCAAAGACCAGGAGGAACGGACTAAGGCCATCGAGGCATTCCGGGAG
GGCAAGAAGGATGTCCTAGTAGCCACAGACGTTGCCTCCAAGGGCCTGGACTTCCCTGCC
ATCCAGCACGTCATCAATTATGACATGCCAGAGGAGATTGAGAACTATGTACACCGGATT
GGCCGCACCGGGCGCTCGGGAAACACAGGCATCGCCACTACCTTCATCAACAAAGCGTGT
GATGAGTCAGTGCTGATGGACCTCAAAGCGCTGCTGCTAGAAGCCAAGCAGAAGGTGCCG
CCCGTGCTGCAGGTGCTGCATTGCGGGGATGAGTCCATGCTGGACATTGGAGGAGAGCGC
GGCTGTGCCTTCTGCGGGGGCCTGGGTCATCGGATCACTGACTGCCCCAAACTCGAGGCT
ATGCAGACCAAGCAGGTCAGCAACATCGGTCGCAAGGACTACCTGGCCCACAGCTCCATG
GACTTC

ORF Protein

Cloned ORF protein sequence for pF1KB5059 Download

>KIBB5059  622 aa
MEESEPERKRARTDEVPAGGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5059 Download

>pF1KB5059  4979 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGGAGTCG
GAACCCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGAAGCCGCTCCGAG
GCGGAAGATGAGGACGACGAGGACTACGTGCCCTATGTGCCGTTACGGCAGCGCCGGCAG
CTACTGCTCCAGAAGCTGCTGCAGCGAAGACGCAAGGGAGCTGCGGAGGAAGAGCAGCAG
GACAGCGGTAGTGAACCCCGGGGAGATGAGGACGACATCCCGCTAGGCCCTCAGTCCAAC
GTCAGCCTCCTGGATCAGCACCAGCACCTTAAAGAGAAGGCTGAAGCGCGCAAAGAGTCT
GCCAAGGAGAAGCAGCTGAAGGAAGAAGAGAAGATCCTGGAGAGTGTTGCCGAGGGCCGA
GCATTGATGTCAGTGAAGGAGATGGCTAAGGGCATTACGTATGATGACCCCATCAAAACC
AGCTGGACTCCACCCCGTTATGTTCTGAGCATGTCTGAAGAGCGACATGAGCGCGTGCGG
AAGAAATACCACATCCTGGTGGAGGGAGACGGTATCCCACCACCCATCAAGAGCTTCAAG
GAAATGAAGTTTCCTGCAGCCATCCTGAGAGGCCTGAAGAAGAAAGGCATTCACCACCCA
ACACCCATTCAGATCCAGGGCATCCCCACCATTCTATCTGGCCGTGACATGATAGGCATC
GCTTTCACGGGTTCAGGCAAGACACTGGTGTTCACGTTGCCCGTCATCATGTTCTGCCTG
GAACAAGAGAAGAGGTTACCCTTCTCAAAGCGCGAGGGGCCCTATGGACTCATCATCTGC
CCCTCGCGGGAGCTGGCCCGGCAGACCCATGGCATCCTGGAGTACTACTGCCGCCTGCTG
CAGGAGGACAGCTCACCACTCCTGCGCTGCGCCCTCTGCATTGGGGGCATGTCCGTGAAA
GAGCAGATGGAGACCATCCGACACGGTGTACACATGATGGTGGCCACCCCGGGGCGCCTC
ATGGATTTGCTGCAGAAGAAGATGGTCAGCCTAGACATCTGTCGCTACCTGGCCCTGGAC
GAGGCTGACCGCATGATCGACATGGGCTTCGAGGGTGACATCCGTACCATCTTCTCCTAC
TTCAAGGGCCAGCGACAGACCCTGCTCTTCAGTGCCACCATGCCGAAGAAGATTCAGAAC
TTTGCTAAGAGTGCCCTTGTAAAGCCTGTGACCATCAATGTGGGGCGTGCTGGGGCTGCC
AGCCTGGATGTCATCCAGGAGGTAGAATATGTGAAGGAGGAGGCCAAGATGGTGTACCTG
CTCGAGTGCCTGCAGAAGACACCCCCGCCTGTACTCATCTTTGCAGAGAAGAAGGCAGAC
GTGGACGCCATCCACGAGTACCTGCTGCTCAAGGGGGTTGAGGCCGTAGCCATCCATGGG
GGCAAAGACCAGGAGGAACGGACTAAGGCCATCGAGGCATTCCGGGAGGGCAAGAAGGAT
GTCCTAGTAGCCACAGACGTTGCCTCCAAGGGCCTGGACTTCCCTGCCATCCAGCACGTC
ATCAATTATGACATGCCAGAGGAGATTGAGAACTATGTACACCGGATTGGCCGCACCGGG
CGCTCGGGAAACACAGGCATCGCCACTACCTTCATCAACAAAGCGTGTGATGAGTCAGTG
CTGATGGACCTCAAAGCGCTGCTGCTAGAAGCCAAGCAGAAGGTGCCGCCCGTGCTGCAG
GTGCTGCATTGCGGGGATGAGTCCATGCTGGACATTGGAGGAGAGCGCGGCTGTGCCTTC
TGCGGGGGCCTGGGTCATCGGATCACTGACTGCCCCAAACTCGAGGCTATGCAGACCAAG
CAGGTCAGCAACATCGGTCGCAAGGACTACCTGGCCCACAGCTCCATGGACTTCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT