STAG3L1 ORF clone FXC02417

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Flexi ORF Clone FXC02417

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Clone info.

Species

human

Clone Name

pF1KB7389 Sequence (with vector) Restriction Map

Product ID

FXC02417

HaloTag Clone PID

FHC02417

ORF Sequence

DNA sequence (615 bp)
Protein sequence (205 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464253]

Gene

KIBB7389

Symbol

STAG3L1

Alias : STAG3L1P, STAG3L2, STAG3L3

Description

stromal antigen 3-like 1 (pseudogene)

Original Clone ID

oc00603

Features of the cloned ORF sequence

Description

Length: 615 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 205 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS64730.1 5.9e-41 73.0 STAG3 CCDS34703.1 6.1e-41 73.0 STAG3 CCDS75642.1 6.1e-41 73.0 STAG3 CCDS3090.1 4.8e-29 46.9 STAG1 CCDS14607.1 7.8e-29 48.8 STAG2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition ProfileScan IPR020839 10 95 PS51425 Stromalin conservative domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 100 EYSVAVEAVRLLILILKLFYPEC 122 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001269647 1167 608489,615723 73.0 92.7 XP_016867176 1180 608489,615723 73.0 92.7 NP_036579 1225 608489,615723 73.0 92.7 NP_001269645 1225 608489,615723 73.0 92.7 XP_011514044 1226 608489,615723 73.0 92.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7389 Download

>KIBB7389  615 bp
ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAG
ATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTC
CTCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTC
CGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGC
CTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCGTGGACAGAGAG
TACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCT
GAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGG
ACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCT
TACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTG
ACAAGCCTGCTGCTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACC
TTCCACCTCCTAGGG

ORF Protein

Cloned ORF protein sequence for pF1KB7389 Download

>KIBB7389  205 aa
MIFSMLRKLPKVTCRDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREV
RVKCVKALKGLYGNRDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILKLFYP
ECEIRTMGGREQRQSPGAQRTFFQLLLSFFVESKLHDHAAYLVDNLWDCAGTQLKDWEGL
TSLLLEKDQSTCHMEPGPGTFHLLG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7389 Download

>pF1KB7389  3728 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATCTTTTCA
ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAGATCCGTGCTATC
TGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGC
TATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGC
GTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTC
ACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCA
GTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCTGAGTGCGAGATA
AGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAG
CTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCTTACTTAGTAGAC
AACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTG
CTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTA
GGGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT