FGD4 ORF clone FXC01857

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Flexi ORF Clone FXC01857

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Clone info.

Species

human

Clone Name

pF1KB9340 Sequence (with vector) Restriction Map

Product ID

FXC01857

HaloTag Clone PID

FHC01857

Original Clone PID

ORK01857

ORF Sequence

DNA sequence (2298 bp)
Protein sequence (766 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385203]

Gene

KIBB9340

Symbol

FGD4

Alias : CMT4H, FRABP, ZFYVE6

Description

FYVE, RhoGEF and PH domain containing 4, transcript variant 3

Original Clone ID

pf11915

Features of the cloned ORF sequence

Description

Length: 2298 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 766 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8727.1 0 100.0 FGD4 CCDS76544.1 0 100.0 FGD4 CCDS76545.1 0 100.0 FGD4 CCDS81679.1 2.5e-216 100.0 FGD4 CCDS4829.1 1.2e-94 54.4 FGD2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000219 210 391 PF00621 Dbl homology (DH) domain IPR001849 423 520 PF00169 Pleckstrin homology domain IPR000306 554 618 PF01363 Zinc finger IPR001849 650 736 PF00169 Pleckstrin homology domain HMMSmart IPR000219 210 392 SM00325 Dbl homology (DH) domain IPR001849 423 523 SM00233 Pleckstrin homology domain IPR000306 551 620 SM00064 Zinc finger IPR001849 644 742 SM00233 Pleckstrin homology domain ProfileScan IPR000219 206 393 PS50010 Dbl homology (DH) domain IPR001849 422 521 PS50003 Pleckstrin homology domain IPR017455 559 619 PS50178 Zinc finger IPR001849 643 740 PS50003 Pleckstrin homology domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011518857 766 609311,611104 100.0 100.0 NP_640334 766 609311,611104 100.0 100.0 XP_011518858 766 609311,611104 100.0 100.0 NP_001291410 851 609311,611104 100.0 100.0 XP_011518856 864 609311,611104 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9340 Download

>KIBB9340  2298 bp
ATGGAGGAAATTAAACCTGCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTAAGGTA
TCAGATCTCATCAGTCGCTTTGAAGGAGGCAGCTCATTATCAAATTATAGTGATTTGAAG
AAAGAGTCTGCTGTGAACCTAAATGCTCCTAGAACCCCAGGAAGGCATGGATTGACAACC
ACACCTCAACAAAAACTCCTCTCCCAGCACTTGCCACAGAGGCAGGGAAATGATACAGAT
AAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATG
GAATGTGAGGAGGAGAAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAAGCTTCTGAA
CCCTTGCTTGATACGCACATAGTGAATGGAGAAAGAGATGAAACTGCCACAGCTCCTGCA
TCACCCACAACAGATAGCTGTGATGGAAATGCTTCTGACAGTAGCTACAGGACTCCAGGC
ATAGGCCCAGTGCTCCCCCTAGAAGAAAGAGGGGCAGAAACAGAAACCAAGGTACAAGAG
AGGGAAAATGGGGAAAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCATGAGATGAAG
GAGACTAATGAGCAAAAACTTCACAAAATAGCCAATGAACTTTTGCTTACTGAAAGAGCT
TATGTCAACCGACTTGACCTCTTAGATCAGGTATTTTATTGCAAACTGTTGGAAGAAGCA
AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATCAATA
AATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAACGAATGCAAGAATGGGAA
ACTACTCCTAGAATTGGAGACATCCTTCAGAAATTGGCACCATTCCTTAAGATGTATGGA
GAATATGTGAAAGGATTTGATAATGCAATGGAATTGGTTAAAAACATGACAGAACGTATT
CCCCAGTTCAAATCAGTGGTTGAAGAAATTCAGAAACAGAAAATCTGTGGGAGCTTAACT
TTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAG
GACTATCTAAGGAAATTGCCTCCTGATTCCCTGGACTGGAATGATGCTAAAAAATCACTT
GAAATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAAGGAAAATGGAGAACCTA
AAGAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAACCCTTCA
AATGAACTAATAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGAACACTTCAGCACAA
GAACGCTACCTTTTCTTATTCAACAACATGTTGCTGTACTGTGTGCCCAAATTCAGCTTG
GTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTAGAG
ACTCAAAATGAAGAATATCCACATACTTTCCAGGTGTCTGGGAAAGAGAGAACACTGGAA
CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAACCATC
GATGCTTTTCATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAAAGGATAATGACATT
CACTCAGAGGTTTCTACTGCTGAGCTAGGGAAAAGAGCCCCAAGATGGATCCGAGATAAT
GAAGTGACAATGTGTATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCAT
CATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGACTACAAAGCTCAACTT
GAATATGATGGTGGTAAATTGAGCAAAGTTTGTAAAGACTGTTATCAAATCATAAGTGGA
TTCACAGACAGTGAAGAAAAGAAAAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTA
TCTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAG
AAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGGTGCCCCC
CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAAATGCCA
AGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTT
GCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAGTCATCCTTTTAGCTGTCACA
GGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTGAACCT
AAGAAAAAATCAGAATGC

ORF Protein

Cloned ORF protein sequence for pF1KB9340 Download

>KIBB9340  766 aa
MEEIKPASASCVSKEKPSKVSDLISRFEGGSSLSNYSDLKKESAVNLNAPRTPGRHGLTT
TPQQKLLSQHLPQRQGNDTDKTQGAQTCVANGVMAAQNQMECEEEKAATLSSDTSIQASE
PLLDTHIVNGERDETATAPASPTTDSCDGNASDSSYRTPGIGPVLPLEERGAETETKVQE
RENGESPLELEQLDQHHEMKETNEQKLHKIANELLLTERAYVNRLDLLDQVFYCKLLEEA
NRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYG
EYVKGFDNAMELVKNMTERIPQFKSVVEEIQKQKICGSLTLQHHMLEPVQRIPRYEMLLK
DYLRKLPPDSLDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPS
NELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPKFSLVGSKFTVRTRVGIDGMKIVE
TQNEEYPHTFQVSGKERTLELQASSAQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDI
HSEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGYVVCWKCSDYKAQL
EYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQ
KAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDEMPRSADLPHSFKLTQSKSVHSF
AADSEELKQKWLKVILLAVTGETPGGPNEHPATLDDHPEPKKKSEC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9340 Download

>pF1KB9340  5411 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGGAAATT
AAACCTGCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTAAGGTATCAGATCTCATC
AGTCGCTTTGAAGGAGGCAGCTCATTATCAAATTATAGTGATTTGAAGAAAGAGTCTGCT
GTGAACCTAAATGCTCCTAGAACCCCAGGAAGGCATGGATTGACAACCACACCTCAACAA
AAACTCCTCTCCCAGCACTTGCCACAGAGGCAGGGAAATGATACAGATAAGACTCAGGGT
GCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATGGAATGTGAGGAG
GAGAAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTTGCTTGAT
ACGCACATAGTGAATGGAGAAAGAGATGAAACTGCCACAGCTCCTGCATCACCCACAACA
GATAGCTGTGATGGAAATGCTTCTGACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTG
CTCCCCCTAGAAGAAAGAGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG
GAAAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGAGACTAATGAG
CAAAAACTTCACAAAATAGCCAATGAACTTTTGCTTACTGAAAGAGCTTATGTCAACCGA
CTTGACCTCTTAGATCAGGTATTTTATTGCAAACTGTTGGAAGAAGCAAACCGAGGCTCG
TTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATCAATAAATGCCTTCCAT
AGTAAATTCCTCTTGCCAGAGCTGGAGAAACGAATGCAAGAATGGGAAACTACTCCTAGA
ATTGGAGACATCCTTCAGAAATTGGCACCATTCCTTAAGATGTATGGAGAATATGTGAAA
GGATTTGATAATGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAA
TCAGTGGTTGAAGAAATTCAGAAACAGAAAATCTGTGGGAGCTTAACTTTGCAGCATCAC
ATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGACTATCTAAGG
AAATTGCCTCCTGATTCCCTGGACTGGAATGATGCTAAAAAATCACTTGAAATTATATCT
ACAGCAGCAAGCCATTCTAATAGTGCAATAAGGAAAATGGAGAACCTAAAGAAACTCTTA
GAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAACCCTTCAAATGAACTAATA
AAAGAAGGACAGATCCTCAAACTAGCTGCTCGGAACACTTCAGCACAAGAACGCTACCTT
TTCTTATTCAACAACATGTTGCTGTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAA
TTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTAGAGACTCAAAATGAA
GAATATCCACATACTTTCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGT
TCTGCGCAAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAACCATCGATGCTTTTCAT
CAAAGGCATGAAACCTTCAGAAATGCAATTGCAAAGGATAATGACATTCACTCAGAGGTT
TCTACTGCTGAGCTAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATG
TGTATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCA
TGTGGATATGTGGTTTGTTGGAAATGCTCCGACTACAAAGCTCAACTTGAATATGATGGT
GGTAAATTGAGCAAAGTTTGTAAAGACTGTTATCAAATCATAAGTGGATTCACAGACAGT
GAAGAAAAGAAAAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGT
GTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGT
GTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGGTGCCCCCCAGGACGTCAGA
GCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGAC
CTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGACAGT
GAGGAACTGAAGCAGAAGTGGCTGAAAGTCATCCTTTTAGCTGTCACAGGTGAGACACCA
GGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTGAACCTAAGAAAAAATCA
GAATGCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAA
TCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGA
AAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAAC
AAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTT
TCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCC
GTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAAT
CCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAG
ACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCC
CAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAG
CGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAAC
AGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGG
GTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCT
ATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGC
TCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGA
GTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT