Length: 4675 bp
|
| cloned DNA seq. | |
Warning for N-terminal truncation: | NO |
Warning for coding interruption: | NO |
KIAA Alignment based on: KIAA1396 DNA sequence, AA sequence
| ROUGE |
Gene/Protein Characteristic Table for mKIAA1396 |
| Link to : HUGE | SWISS-PROT/TrEMBL | |
| Features : DNA sequence | Protein sequence | |
| Accession No. : | AK173164 |
|---|---|
| mfj16154 [Vector Info] | |
| Source : | Mouse fetal brain |
Features of the cloned DNA sequence |
Description | |
|---|---|---|
Length: 4675 bp
|
|
| cloned DNA seq. | |
Warning for N-terminal truncation: | NO |
Warning for coding interruption: | NO |
KIAA Alignment based on: KIAA1396 DNA sequence, AA sequence
Features of the protein sequence |
Description | |
Coding region: 116..1561
Length: 481 aa
 |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
 |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR007086 | 313 | 326 | PR00048 | Zinc finger |
| IPR007086 | 413 | 422 | PR00048 | Zinc finger | |
| HMMPfam | IPR001909 | 15 | 55 | PF01352 | KRAB box |
| IPR007087 | 174 | 196 | PF00096 | Zinc finger | |
| IPR007087 | 202 | 224 | PF00096 | Zinc finger | |
| IPR007087 | 230 | 252 | PF00096 | Zinc finger | |
| IPR007087 | 258 | 280 | PF00096 | Zinc finger | |
| IPR007087 | 286 | 308 | PF00096 | Zinc finger | |
| IPR007087 | 314 | 336 | PF00096 | Zinc finger | |
| IPR007087 | 342 | 364 | PF00096 | Zinc finger | |
| IPR007087 | 370 | 392 | PF00096 | Zinc finger | |
| IPR007087 | 398 | 420 | PF00096 | Zinc finger | |
| IPR007087 | 426 | 448 | PF00096 | Zinc finger | |
| IPR007087 | 454 | 476 | PF00096 | Zinc finger | |
| HMMSmart | IPR001909 | 15 | 75 | SM00349 | KRAB box |
| IPR007087 | 174 | 196 | SM00355 | Zinc finger | |
| IPR007087 | 202 | 224 | SM00355 | Zinc finger | |
| IPR007087 | 230 | 252 | SM00355 | Zinc finger | |
| IPR007087 | 258 | 280 | SM00355 | Zinc finger | |
| IPR007087 | 286 | 308 | SM00355 | Zinc finger | |
| IPR007087 | 314 | 336 | SM00355 | Zinc finger | |
| IPR007087 | 342 | 364 | SM00355 | Zinc finger | |
| IPR007087 | 370 | 392 | SM00355 | Zinc finger | |
| IPR007087 | 398 | 420 | SM00355 | Zinc finger | |
| IPR007087 | 426 | 448 | SM00355 | Zinc finger | |
| IPR007087 | 454 | 476 | SM00355 | Zinc finger | |
| ProfileScan | IPR001909 | 15 | 87 | PS50805 | KRAB box |
| IPR007087 | 174 | 201 | PS50157 | Zinc finger | |
| IPR007087 | 202 | 229 | PS50157 | Zinc finger | |
| IPR007087 | 230 | 257 | PS50157 | Zinc finger | |
| IPR007087 | 258 | 285 | PS50157 | Zinc finger | |
| IPR007087 | 286 | 313 | PS50157 | Zinc finger | |
| IPR007087 | 314 | 341 | PS50157 | Zinc finger | |
| IPR007087 | 342 | 369 | PS50157 | Zinc finger | |
| IPR007087 | 370 | 397 | PS50157 | Zinc finger | |
| IPR007087 | 398 | 425 | PS50157 | Zinc finger | |
| IPR007087 | 426 | 453 | PS50157 | Zinc finger | |
| IPR007087 | 454 | 481 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 176 | 196 | PS00028 | Zinc finger |
| IPR007087 | 204 | 226 | PS00028 | Zinc finger | |
| IPR007087 | 232 | 252 | PS00028 | Zinc finger | |
| IPR007087 | 260 | 280 | PS00028 | Zinc finger | |
| IPR007087 | 288 | 308 | PS00028 | Zinc finger | |
| IPR007087 | 316 | 336 | PS00028 | Zinc finger | |
| IPR007087 | 344 | 364 | PS00028 | Zinc finger | |
| IPR007087 | 372 | 392 | PS00028 | Zinc finger | |
| IPR007087 | 400 | 420 | PS00028 | Zinc finger | |
| IPR007087 | 428 | 448 | PS00028 | Zinc finger | |
| IPR007087 | 456 | 476 | PS00028 | Zinc finger |
| Method | From | To | amino acid sequence |
|---|---|---|---|
| - | - | - | - |
|
How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage 
| |