database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | Q9XHM0_MEDTR | 515 | 69.9 | 75.5 | (tr|Q9XHM0) Putative translation initiation protein OS=Medicago truncatula GN=AM3-2 PE=2 SV=1 |
TAIR_pep | AT3G56150.1 | 417 | 77.7 | 91.4 | | Symbols: ATEIF3C-1, EIF3C-1, ATTIF3C1, TIF3C1, EIF3C | EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3) | chr3:20844769-20847799 REVERSE |
Medicago | IMGA|AC137602_12.5 | 514 | 69.9 | 75.5 | Proteasome component region PCI; Eukaryotic translation initiation factor 3 subunit 8, C-terminal; Eukaryotic translation initiation factor 3 subunit 8, N-terminal chr07_pseudomolecule_IMGAG_V2 32350180-32354375 E EGN_Mt071002 20080227 |
Soybean | Glyma05g33930.1 | 528 | 72.3 | 77.1 | |
Lotus Consensus | KMC000477A_C01 | 718 | 99.5 | 99.5 | KMC000477A_c01 |
3' Unigene | KMC000477A_C01 | 1078 | 99.3 | 99.3 | KMC000477A_c01 |
chr1.CM0029.320.nd | length: 373 aa. | |||
IPR000717 | Proteasome component region PCI | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
HMMPfam | PF01399 | PCI | 8.7e-36 | 95-225 |
HMMSmart | SM00088 | no description | 1.7e-18 | 157-243 |
IPR008904 | Eukaryotic translation initiation factor 3 subunit 8, C-terminal | |||
Molecular Function | GO:0003743 | translation initiation factor activity | ||
Cellular Component | GO:0005852 | eukaryotic translation initiation factor 3 complex | ||
Biological Process | GO:0006413 | translational initiation | ||
HMMPfam | PF05469 | eIF-3c_C | 1.2e-52 | 226-373 |
IPR008905 | Eukaryotic translation initiation factor 3 subunit 8, N-terminal | |||
Molecular Function | GO:0003743 | translation initiation factor activity | ||
Cellular Component | GO:0005852 | eukaryotic translation initiation factor 3 complex | ||
Biological Process | GO:0006413 | translational initiation | ||
HMMPfam | PF05470 | eIF-3c_N | 4.7e-72 | 1-88 |
no_ID | ||||
Gene3D | 1.10.10.10 | no description | 1.6e-05 | 147-234 |
HMMPanther | PTHR13937 | EUKARYOTIC | 8.5e-140 | 1-320 |
ProfileScan | PS50250 | PCI_DOMAIN | 20.041 | 120-225 |
Seg | seg | seg | NA | 258-271 275-287 300-312 321-346 |
Name | Length | cTP | mTP | SP | other | Loc. | RC |
---|---|---|---|---|---|---|---|
chr1.CM0029.320.nd | 373 | 0.048 | 0.120 | 0.057 | 0.532 | _ | 3 |
chr1.CM0029.320.nd nucl 9, cyto 5
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
chr1.CM0029.320.nd | Not targeted | -33.178 | -0.577 | -0.614 | 37.51% | -31.987 |